Strain Fitness in Escherichia coli BW25113 around b0739
Experiment: Isobutyl alcohol 1.25 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Isobutyl alcohol 1.25 vol% |
---|---|---|---|---|---|
remove | |||||
774,571 | + | tolQ | b0737 | 0.28 | +1.3 |
774,649 | + | tolQ | b0737 | 0.39 | -2.3 |
774,668 | - | tolQ | b0737 | 0.42 | +0.3 |
774,723 | + | tolQ | b0737 | 0.50 | +1.8 |
774,723 | + | tolQ | b0737 | 0.50 | +0.7 |
774,809 | - | tolQ | b0737 | 0.62 | +0.7 |
774,813 | - | tolQ | b0737 | 0.63 | +0.1 |
774,818 | - | tolQ | b0737 | 0.64 | +1.3 |
774,839 | + | tolQ | b0737 | 0.67 | +1.3 |
774,905 | + | tolQ | b0737 | 0.76 | -1.2 |
774,956 | + | tolQ | b0737 | 0.84 | +0.3 |
775,063 | + | +0.2 | |||
775,063 | + | +0.2 | |||
775,070 | - | -0.5 | |||
775,071 | - | +0.1 | |||
775,071 | - | -0.2 | |||
775,091 | - | +1.3 | |||
775,121 | + | tolR | b0738 | 0.11 | +1.1 |
775,121 | + | tolR | b0738 | 0.11 | +2.1 |
775,121 | + | tolR | b0738 | 0.11 | +1.3 |
775,146 | + | tolR | b0738 | 0.17 | -0.4 |
775,152 | - | tolR | b0738 | 0.19 | -0.3 |
775,194 | - | tolR | b0738 | 0.28 | +2.3 |
775,258 | + | tolR | b0738 | 0.43 | +0.3 |
775,265 | + | tolR | b0738 | 0.45 | +0.3 |
775,275 | + | tolR | b0738 | 0.47 | +1.3 |
775,280 | + | tolR | b0738 | 0.48 | -1.5 |
775,288 | - | tolR | b0738 | 0.50 | +0.3 |
775,288 | - | tolR | b0738 | 0.50 | +0.9 |
775,298 | - | tolR | b0738 | 0.53 | -0.5 |
775,333 | + | tolR | b0738 | 0.61 | +0.7 |
775,333 | + | tolR | b0738 | 0.61 | -0.5 |
775,357 | - | tolR | b0738 | 0.66 | -0.3 |
775,526 | - | +0.5 | |||
775,533 | + | +0.4 | |||
775,565 | + | -0.7 | |||
775,628 | + | +0.3 | |||
775,651 | + | +0.3 | |||
775,659 | - | +1.3 | |||
775,672 | + | -1.3 | |||
775,748 | + | tolA | b0739 | 0.14 | +0.6 |
775,753 | + | tolA | b0739 | 0.15 | +1.3 |
775,840 | + | tolA | b0739 | 0.22 | +1.0 |
775,930 | - | tolA | b0739 | 0.29 | +0.9 |
775,932 | + | tolA | b0739 | 0.29 | +0.6 |
775,947 | + | tolA | b0739 | 0.30 | +2.3 |
776,098 | - | tolA | b0739 | 0.42 | -0.3 |
776,124 | + | tolA | b0739 | 0.44 | +1.9 |
776,146 | + | tolA | b0739 | 0.46 | -0.7 |
776,265 | - | tolA | b0739 | 0.55 | +1.8 |
776,265 | - | tolA | b0739 | 0.55 | +0.7 |
776,464 | + | tolA | b0739 | 0.71 | -1.4 |
776,475 | - | tolA | b0739 | 0.72 | +1.1 |
776,601 | - | tolA | b0739 | 0.82 | +0.3 |
776,625 | - | tolA | b0739 | 0.84 | +1.3 |
776,640 | - | tolA | b0739 | 0.85 | +1.3 |
776,640 | - | tolA | b0739 | 0.85 | -0.5 |
776,657 | - | tolA | b0739 | 0.86 | -0.7 |
776,713 | - | -0.3 | |||
776,725 | + | -0.3 | |||
776,779 | - | -0.5 | |||
776,943 | + | -0.2 | |||
776,968 | - | -0.4 | |||
776,994 | + | -2.2 | |||
776,994 | + | +0.3 | |||
777,012 | + | +1.9 | |||
777,014 | + | -0.3 | |||
777,135 | + | tolB | b0740 | 0.13 | -0.0 |
777,146 | + | tolB | b0740 | 0.14 | +0.6 |
777,260 | + | tolB | b0740 | 0.23 | +3.1 |
777,278 | - | tolB | b0740 | 0.24 | -0.3 |
777,299 | - | tolB | b0740 | 0.26 | +0.4 |
777,303 | - | tolB | b0740 | 0.26 | -2.3 |
777,393 | - | tolB | b0740 | 0.33 | +1.3 |
777,398 | - | tolB | b0740 | 0.34 | +0.3 |
777,444 | - | tolB | b0740 | 0.37 | -0.4 |
777,513 | + | tolB | b0740 | 0.43 | +1.3 |
777,522 | - | tolB | b0740 | 0.43 | +0.3 |
777,602 | - | tolB | b0740 | 0.49 | -0.7 |
777,602 | - | tolB | b0740 | 0.49 | -2.5 |
777,692 | + | tolB | b0740 | 0.56 | -0.7 |
777,700 | - | tolB | b0740 | 0.57 | +2.1 |
777,720 | - | tolB | b0740 | 0.59 | -1.4 |
777,770 | - | tolB | b0740 | 0.62 | -2.0 |
777,792 | - | tolB | b0740 | 0.64 | +0.5 |
Or see this region's nucleotide sequence