Experiment: Carbon source L-Citrulline 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_02905 and PS417_02910 overlap by 1 nucleotides PS417_02910 and PS417_02915 overlap by 1 nucleotides PS417_02915 and PS417_02920 are separated by 236 nucleotides
PS417_02905: PS417_02905 - precorrin isomerase, at 663,150 to 663,776
_02905
PS417_02910: PS417_02910 - precorrin-2 C20-methyltransferase, at 663,776 to 664,507
_02910
PS417_02915: PS417_02915 - precorrin-3B C17-methyltransferase, at 664,507 to 666,144
_02915
PS417_02920: PS417_02920 - hypothetical protein, at 666,381 to 667,160
_02920
Position (kb) 664
665
666
667 Strain fitness (log2 ratio) -2
-1
0
1
2 at 664.008 kb on - strand, within PS417_02910 at 664.124 kb on + strand, within PS417_02910 at 664.125 kb on - strand, within PS417_02910 at 664.125 kb on - strand, within PS417_02910 at 664.130 kb on + strand, within PS417_02910 at 664.130 kb on + strand, within PS417_02910 at 664.229 kb on + strand, within PS417_02910 at 664.391 kb on + strand, within PS417_02910 at 664.392 kb on - strand, within PS417_02910 at 664.524 kb on + strand at 664.525 kb on - strand at 664.631 kb on - strand at 664.663 kb on + strand at 664.991 kb on + strand at 665.114 kb on - strand, within PS417_02915 at 665.482 kb on + strand, within PS417_02915 at 665.483 kb on - strand, within PS417_02915 at 665.603 kb on + strand, within PS417_02915 at 665.866 kb on + strand, within PS417_02915 at 665.866 kb on + strand, within PS417_02915 at 665.867 kb on - strand at 666.335 kb on + strand at 666.336 kb on - strand at 666.347 kb on - strand at 666.347 kb on - strand at 666.347 kb on - strand at 666.347 kb on - strand at 666.378 kb on - strand at 666.410 kb on + strand at 666.438 kb on + strand at 666.568 kb on - strand, within PS417_02920 at 666.575 kb on + strand, within PS417_02920 at 666.583 kb on - strand, within PS417_02920 at 666.583 kb on - strand, within PS417_02920 at 666.583 kb on - strand, within PS417_02920 at 666.583 kb on - strand, within PS417_02920 at 666.583 kb on - strand, within PS417_02920 at 666.600 kb on + strand, within PS417_02920 at 666.600 kb on + strand, within PS417_02920 at 666.600 kb on + strand, within PS417_02920 at 666.600 kb on + strand, within PS417_02920 at 666.601 kb on - strand, within PS417_02920 at 666.601 kb on - strand, within PS417_02920 at 666.601 kb on - strand, within PS417_02920 at 666.759 kb on - strand, within PS417_02920 at 666.811 kb on + strand, within PS417_02920 at 666.856 kb on + strand, within PS417_02920 at 666.969 kb on + strand, within PS417_02920 at 666.970 kb on - strand, within PS417_02920 at 666.970 kb on - strand, within PS417_02920 at 666.997 kb on + strand, within PS417_02920 at 666.998 kb on - strand, within PS417_02920
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source L-Citrulline 5 mM remove 664,008 - PS417_02910 0.32 -0.1 664,124 + PS417_02910 0.48 -0.7 664,125 - PS417_02910 0.48 -0.5 664,125 - PS417_02910 0.48 -0.8 664,130 + PS417_02910 0.48 -0.3 664,130 + PS417_02910 0.48 +0.4 664,229 + PS417_02910 0.62 -0.5 664,391 + PS417_02910 0.84 -0.2 664,392 - PS417_02910 0.84 +1.9 664,524 + +0.3 664,525 - +0.7 664,631 - -0.4 664,663 + -0.3 664,991 + +0.3 665,114 - PS417_02915 0.37 -0.5 665,482 + PS417_02915 0.60 -2.2 665,483 - PS417_02915 0.60 -0.6 665,603 + PS417_02915 0.67 -0.3 665,866 + PS417_02915 0.83 -0.9 665,866 + PS417_02915 0.83 -1.1 665,867 - +0.9 666,335 + -0.1 666,336 - +0.3 666,347 - +1.9 666,347 - -0.0 666,347 - -0.1 666,347 - +0.1 666,378 - -0.1 666,410 + +0.5 666,438 + +1.5 666,568 - PS417_02920 0.24 +0.0 666,575 + PS417_02920 0.25 -1.1 666,583 - PS417_02920 0.26 +0.2 666,583 - PS417_02920 0.26 -0.4 666,583 - PS417_02920 0.26 +1.1 666,583 - PS417_02920 0.26 -0.6 666,583 - PS417_02920 0.26 -0.3 666,600 + PS417_02920 0.28 +0.2 666,600 + PS417_02920 0.28 -0.1 666,600 + PS417_02920 0.28 +0.0 666,600 + PS417_02920 0.28 +0.2 666,601 - PS417_02920 0.28 +0.9 666,601 - PS417_02920 0.28 +0.1 666,601 - PS417_02920 0.28 +0.5 666,759 - PS417_02920 0.48 +1.3 666,811 + PS417_02920 0.55 -0.6 666,856 + PS417_02920 0.61 +0.5 666,969 + PS417_02920 0.75 +0.0 666,970 - PS417_02920 0.76 -2.1 666,970 - PS417_02920 0.76 -0.4 666,997 + PS417_02920 0.79 +0.4 666,998 - PS417_02920 0.79 -0.1
Or see this region's nucleotide sequence