Experiment: Carbon source L-Citrulline 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_24755 and PS417_24760 overlap by 4 nucleotides PS417_24760 and PS417_24765 are separated by 21 nucleotides PS417_24765 and PS417_24770 overlap by 4 nucleotides PS417_24770 and PS417_24775 are separated by 177 nucleotides
PS417_24755: PS417_24755 - phosphoesterase, at 5,370,076 to 5,371,392
_24755
PS417_24760: PS417_24760 - ATP-dependent protease, at 5,371,389 to 5,371,979
_24760
PS417_24765: PS417_24765 - membrane protein, at 5,372,001 to 5,372,717
_24765
PS417_24770: PS417_24770 - murein hydrolase transporter LrgA, at 5,372,714 to 5,373,067
_24770
PS417_24775: PS417_24775 - dehydratase, at 5,373,245 to 5,373,700
_24775
Position (kb)
5372
5373 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5371.382 kb on - strand at 5371.387 kb on + strand at 5371.387 kb on + strand at 5371.388 kb on - strand at 5371.388 kb on - strand at 5371.391 kb on - strand at 5371.391 kb on - strand at 5371.391 kb on - strand at 5371.507 kb on + strand, within PS417_24760 at 5371.980 kb on - strand at 5371.980 kb on - strand at 5372.003 kb on - strand at 5372.173 kb on - strand, within PS417_24765 at 5372.191 kb on + strand, within PS417_24765 at 5372.394 kb on + strand, within PS417_24765 at 5372.406 kb on - strand, within PS417_24765 at 5372.531 kb on - strand, within PS417_24765 at 5372.639 kb on - strand, within PS417_24765 at 5373.060 kb on - strand at 5373.060 kb on - strand at 5373.060 kb on - strand at 5373.060 kb on - strand at 5373.100 kb on + strand at 5373.100 kb on + strand at 5373.100 kb on + strand at 5373.100 kb on + strand at 5373.101 kb on - strand at 5373.101 kb on - strand at 5373.101 kb on - strand at 5373.101 kb on - strand at 5373.116 kb on - strand at 5373.175 kb on + strand at 5373.175 kb on + strand at 5373.176 kb on - strand at 5373.176 kb on - strand at 5373.190 kb on + strand at 5373.214 kb on + strand at 5373.214 kb on + strand at 5373.251 kb on + strand at 5373.252 kb on - strand at 5373.252 kb on - strand at 5373.255 kb on + strand at 5373.255 kb on + strand at 5373.255 kb on + strand at 5373.256 kb on - strand at 5373.256 kb on - strand at 5373.331 kb on + strand, within PS417_24775 at 5373.331 kb on + strand, within PS417_24775 at 5373.510 kb on - strand, within PS417_24775 at 5373.510 kb on - strand, within PS417_24775 at 5373.665 kb on + strand at 5373.665 kb on + strand at 5373.665 kb on + strand at 5373.665 kb on + strand at 5373.665 kb on + strand at 5373.666 kb on - strand at 5373.666 kb on - strand at 5373.666 kb on - strand at 5373.666 kb on - strand at 5373.689 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source L-Citrulline 5 mM remove 5,371,382 - -1.2 5,371,387 + +0.7 5,371,387 + -0.4 5,371,388 - -0.9 5,371,388 - -1.9 5,371,391 - +0.5 5,371,391 - -0.2 5,371,391 - +0.3 5,371,507 + PS417_24760 0.20 -1.4 5,371,980 - +0.2 5,371,980 - -1.6 5,372,003 - +0.7 5,372,173 - PS417_24765 0.24 -2.0 5,372,191 + PS417_24765 0.26 -1.8 5,372,394 + PS417_24765 0.55 -1.0 5,372,406 - PS417_24765 0.56 -1.5 5,372,531 - PS417_24765 0.74 -1.4 5,372,639 - PS417_24765 0.89 -0.8 5,373,060 - -0.5 5,373,060 - -0.2 5,373,060 - +1.6 5,373,060 - -1.8 5,373,100 + +0.1 5,373,100 + +0.9 5,373,100 + +0.1 5,373,100 + +1.3 5,373,101 - -0.3 5,373,101 - +0.2 5,373,101 - -1.4 5,373,101 - +0.5 5,373,116 - -0.6 5,373,175 + -1.2 5,373,175 + -1.0 5,373,176 - -0.5 5,373,176 - +1.9 5,373,190 + +0.7 5,373,214 + +1.3 5,373,214 + +0.9 5,373,251 + -1.6 5,373,252 - +0.9 5,373,252 - -1.2 5,373,255 + -0.2 5,373,255 + +0.6 5,373,255 + +0.5 5,373,256 - -0.4 5,373,256 - -0.1 5,373,331 + PS417_24775 0.19 -0.1 5,373,331 + PS417_24775 0.19 -0.3 5,373,510 - PS417_24775 0.58 +2.3 5,373,510 - PS417_24775 0.58 -0.6 5,373,665 + +0.0 5,373,665 + +0.3 5,373,665 + +1.9 5,373,665 + -0.3 5,373,665 + -1.7 5,373,666 - -0.8 5,373,666 - +0.1 5,373,666 - +0.0 5,373,666 - -2.4 5,373,689 + -0.4
Or see this region's nucleotide sequence