Experiment: Carbon source L-Ornithine 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_27535 and PS417_27540 are separated by 505 nucleotides PS417_27540 and PS417_27545 are separated by 142 nucleotides PS417_27545 and PS417_27550 are separated by 125 nucleotides
PS417_27535: PS417_27535 - chemotaxis protein CheY, at 5,940,418 to 5,941,164
_27535
PS417_27540: PS417_27540 - argininosuccinate lyase, at 5,941,670 to 5,943,064
_27540
PS417_27545: PS417_27545 - glutathione S-transferase, at 5,943,207 to 5,943,866
_27545
PS417_27550: PS417_27550 - hypothetical protein, at 5,943,992 to 5,944,276
_27550
Position (kb) 5941
5942
5943
5944 Strain fitness (log2 ratio) -1
0
1
2
3 at 5941.078 kb on + strand, within PS417_27535 at 5941.078 kb on + strand, within PS417_27535 at 5941.079 kb on - strand, within PS417_27535 at 5941.164 kb on + strand at 5941.206 kb on + strand at 5941.206 kb on + strand at 5941.207 kb on - strand at 5941.251 kb on - strand at 5941.290 kb on - strand at 5941.290 kb on - strand at 5941.290 kb on - strand at 5941.372 kb on - strand at 5941.391 kb on + strand at 5941.438 kb on + strand at 5941.438 kb on + strand at 5941.439 kb on - strand at 5941.452 kb on + strand at 5941.453 kb on - strand at 5941.489 kb on + strand at 5941.504 kb on + strand at 5941.505 kb on - strand at 5941.505 kb on - strand at 5941.505 kb on - strand at 5941.505 kb on - strand at 5941.569 kb on + strand at 5942.809 kb on - strand, within PS417_27540 at 5943.131 kb on - strand at 5943.131 kb on - strand at 5943.131 kb on - strand at 5943.131 kb on - strand at 5943.388 kb on + strand at 5943.388 kb on + strand, within PS417_27545 at 5943.388 kb on + strand, within PS417_27545 at 5943.388 kb on + strand, within PS417_27545 at 5943.389 kb on - strand, within PS417_27545 at 5943.389 kb on - strand, within PS417_27545 at 5943.398 kb on - strand, within PS417_27545 at 5943.433 kb on + strand, within PS417_27545 at 5943.434 kb on - strand, within PS417_27545 at 5943.434 kb on - strand, within PS417_27545 at 5943.434 kb on - strand, within PS417_27545 at 5943.434 kb on - strand, within PS417_27545 at 5943.571 kb on + strand, within PS417_27545 at 5943.572 kb on - strand, within PS417_27545 at 5943.572 kb on - strand, within PS417_27545 at 5943.572 kb on - strand, within PS417_27545 at 5943.693 kb on - strand, within PS417_27545 at 5943.829 kb on + strand at 5943.830 kb on - strand at 5943.830 kb on - strand at 5943.832 kb on + strand at 5943.833 kb on - strand at 5943.833 kb on - strand at 5943.833 kb on - strand at 5943.837 kb on - strand at 5943.837 kb on - strand at 5943.909 kb on - strand at 5943.910 kb on + strand at 5943.910 kb on + strand at 5943.910 kb on + strand at 5943.911 kb on - strand at 5943.911 kb on - strand at 5943.911 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source L-Ornithine 5 mM remove 5,941,078 + PS417_27535 0.88 -0.9 5,941,078 + PS417_27535 0.88 +0.6 5,941,079 - PS417_27535 0.88 +0.1 5,941,164 + -1.4 5,941,206 + -0.8 5,941,206 + -0.6 5,941,207 - -1.0 5,941,251 - -0.2 5,941,290 - -1.3 5,941,290 - -0.6 5,941,290 - +1.1 5,941,372 - -0.0 5,941,391 + -0.0 5,941,438 + +0.6 5,941,438 + -0.0 5,941,439 - +0.7 5,941,452 + -0.1 5,941,453 - +0.6 5,941,489 + +2.2 5,941,504 + +0.1 5,941,505 - -0.3 5,941,505 - +0.5 5,941,505 - -0.2 5,941,505 - -0.8 5,941,569 + -0.1 5,942,809 - PS417_27540 0.82 -1.1 5,943,131 - -0.6 5,943,131 - +0.3 5,943,131 - -0.3 5,943,131 - +0.7 5,943,388 + +2.9 5,943,388 + PS417_27545 0.27 +0.1 5,943,388 + PS417_27545 0.27 +0.3 5,943,388 + PS417_27545 0.27 -0.9 5,943,389 - PS417_27545 0.28 +0.1 5,943,389 - PS417_27545 0.28 +1.1 5,943,398 - PS417_27545 0.29 +0.1 5,943,433 + PS417_27545 0.34 -0.1 5,943,434 - PS417_27545 0.34 -0.9 5,943,434 - PS417_27545 0.34 -0.2 5,943,434 - PS417_27545 0.34 +0.9 5,943,434 - PS417_27545 0.34 -0.2 5,943,571 + PS417_27545 0.55 +0.8 5,943,572 - PS417_27545 0.55 -1.6 5,943,572 - PS417_27545 0.55 -0.2 5,943,572 - PS417_27545 0.55 -0.7 5,943,693 - PS417_27545 0.74 +0.3 5,943,829 + +0.1 5,943,830 - +0.4 5,943,830 - +0.6 5,943,832 + -0.1 5,943,833 - -1.1 5,943,833 - -0.5 5,943,833 - +0.0 5,943,837 - +0.1 5,943,837 - -1.1 5,943,909 - +1.9 5,943,910 + +0.8 5,943,910 + +0.2 5,943,910 + -0.3 5,943,911 - +0.3 5,943,911 - -0.8 5,943,911 - +0.9
Or see this region's nucleotide sequence