Experiment: Carbon source L-Ornithine 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_22515 and PS417_22520 are separated by 46 nucleotides PS417_22520 and PS417_22525 are separated by 2 nucleotides PS417_22525 and PS417_22530 are separated by 125 nucleotides
PS417_22515: PS417_22515 - 2-dehydropantoate 2-reductase, at 4,872,963 to 4,873,880
_22515
PS417_22520: PS417_22520 - histidine kinase, at 4,873,927 to 4,875,963
_22520
PS417_22525: PS417_22525 - ATP--cobalamin adenosyltransferase, at 4,875,966 to 4,876,544
_22525
PS417_22530: PS417_22530 - hypothetical protein, at 4,876,670 to 4,877,614
_22530
Position (kb)
4873
4874
4875
4876 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4872.980 kb on + strand at 4872.981 kb on - strand at 4872.981 kb on - strand at 4873.124 kb on - strand, within PS417_22515 at 4873.203 kb on + strand at 4873.204 kb on - strand, within PS417_22515 at 4873.399 kb on - strand, within PS417_22515 at 4873.555 kb on - strand, within PS417_22515 at 4873.555 kb on - strand, within PS417_22515 at 4873.711 kb on - strand, within PS417_22515 at 4873.723 kb on - strand, within PS417_22515 at 4873.723 kb on - strand, within PS417_22515 at 4873.762 kb on - strand, within PS417_22515 at 4873.762 kb on - strand, within PS417_22515 at 4873.765 kb on + strand, within PS417_22515 at 4873.765 kb on + strand, within PS417_22515 at 4873.765 kb on + strand, within PS417_22515 at 4873.766 kb on - strand, within PS417_22515 at 4873.766 kb on - strand at 4873.766 kb on - strand, within PS417_22515 at 4874.360 kb on + strand, within PS417_22520 at 4874.545 kb on + strand, within PS417_22520 at 4875.616 kb on - strand, within PS417_22520 at 4875.990 kb on + strand at 4875.990 kb on + strand at 4875.990 kb on + strand at 4875.990 kb on + strand at 4875.990 kb on + strand at 4875.990 kb on + strand at 4875.991 kb on - strand at 4875.991 kb on - strand at 4875.991 kb on - strand at 4875.991 kb on - strand at 4875.992 kb on + strand at 4875.992 kb on + strand at 4876.086 kb on - strand, within PS417_22525 at 4876.109 kb on - strand, within PS417_22525 at 4876.155 kb on - strand, within PS417_22525 at 4876.155 kb on - strand, within PS417_22525 at 4876.357 kb on + strand, within PS417_22525 at 4876.357 kb on + strand, within PS417_22525 at 4876.358 kb on - strand, within PS417_22525 at 4876.358 kb on - strand, within PS417_22525 at 4876.440 kb on + strand, within PS417_22525 at 4876.440 kb on + strand, within PS417_22525 at 4876.441 kb on - strand, within PS417_22525 at 4876.543 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source L-Ornithine 5 mM remove 4,872,980 + +0.3 4,872,981 - -0.5 4,872,981 - -0.1 4,873,124 - PS417_22515 0.18 +0.8 4,873,203 + +0.8 4,873,204 - PS417_22515 0.26 -0.3 4,873,399 - PS417_22515 0.47 -0.1 4,873,555 - PS417_22515 0.64 -0.4 4,873,555 - PS417_22515 0.64 +0.6 4,873,711 - PS417_22515 0.81 +0.6 4,873,723 - PS417_22515 0.83 -0.3 4,873,723 - PS417_22515 0.83 +0.2 4,873,762 - PS417_22515 0.87 +0.4 4,873,762 - PS417_22515 0.87 +1.3 4,873,765 + PS417_22515 0.87 -1.8 4,873,765 + PS417_22515 0.87 -0.6 4,873,765 + PS417_22515 0.87 -0.6 4,873,766 - PS417_22515 0.87 -1.0 4,873,766 - +1.6 4,873,766 - PS417_22515 0.87 +0.4 4,874,360 + PS417_22520 0.21 +0.6 4,874,545 + PS417_22520 0.30 +0.7 4,875,616 - PS417_22520 0.83 -1.6 4,875,990 + -0.3 4,875,990 + +0.6 4,875,990 + +0.3 4,875,990 + +0.6 4,875,990 + -3.0 4,875,990 + -0.4 4,875,991 - +0.0 4,875,991 - -0.1 4,875,991 - +0.2 4,875,991 - -0.4 4,875,992 + -0.0 4,875,992 + -0.1 4,876,086 - PS417_22525 0.21 -0.8 4,876,109 - PS417_22525 0.25 +0.2 4,876,155 - PS417_22525 0.33 -0.6 4,876,155 - PS417_22525 0.33 +0.2 4,876,357 + PS417_22525 0.68 -0.5 4,876,357 + PS417_22525 0.68 -0.4 4,876,358 - PS417_22525 0.68 +0.0 4,876,358 - PS417_22525 0.68 -0.7 4,876,440 + PS417_22525 0.82 -0.6 4,876,440 + PS417_22525 0.82 +1.1 4,876,441 - PS417_22525 0.82 -0.4 4,876,543 - -0.6
Or see this region's nucleotide sequence