Strain Fitness in Pseudomonas simiae WCS417 around PS417_22325

Experiment: Carbon source L-Ornithine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source L-Ornithine 5 mM
4,834,838	+		PS417_22320	0.65	-1.2
4,834,839	-		PS417_22320	0.65	-0.2
4,835,029	+		PS417_22320	0.78	-0.2
4,835,029	+		PS417_22320	0.78	+1.2
4,835,089	+		PS417_22320	0.82	-0.8
4,835,090	-		PS417_22320	0.82	+0.7
4,835,090	-		PS417_22320	0.82	+0.5
4,835,113	+		PS417_22320	0.84	-0.4
4,835,113	+		PS417_22320	0.84	+0.5
4,835,114	-		PS417_22320	0.84	-1.3
4,835,114	-		PS417_22320	0.84	+0.2
4,835,114	-		PS417_22320	0.84	+1.4
4,835,114	-		PS417_22320	0.84	+0.2
4,835,119	+		PS417_22320	0.84	-0.5
4,835,120	-				+0.5
4,835,120	-		PS417_22320	0.84	-1.2
4,835,120	-		PS417_22320	0.84	+0.2
4,835,120	-		PS417_22320	0.84	+0.2
4,835,120	-		PS417_22320	0.84	+1.0
4,835,360	+				-0.9
4,835,481	-				-0.4
4,835,510	+				-1.0
4,835,511	-				+0.4
4,835,525	+				-2.5
4,835,597	+				-1.6
4,835,598	-				-0.0
4,835,598	-				+0.3
4,835,603	+				-1.1
4,835,604	-				+0.3
4,835,604	-				+0.5
4,835,682	+				-1.2
4,835,683	-				+0.6
4,835,820	+				+0.3
4,835,821	-				+0.1
4,835,888	-				-0.6
4,835,888	-				+0.6
4,836,014	+		PS417_22325	0.16	-0.2
4,836,014	+		PS417_22325	0.16	-0.4
4,836,014	+		PS417_22325	0.16	+0.9
4,836,020	+		PS417_22325	0.16	+0.8
4,836,021	-		PS417_22325	0.16	-0.4
4,836,044	+		PS417_22325	0.18	-1.0
4,836,045	-		PS417_22325	0.18	+0.6
4,836,045	-		PS417_22325	0.18	-1.0
4,836,045	-		PS417_22325	0.18	+0.7
4,836,104	+		PS417_22325	0.22	+0.4
4,836,505	+		PS417_22325	0.50	+0.9
4,836,506	-		PS417_22325	0.50	-0.5
4,836,819	+		PS417_22325	0.72	-0.1
4,836,819	+		PS417_22325	0.72	+0.1
4,836,819	+		PS417_22325	0.72	+0.5
4,836,819	+		PS417_22325	0.72	+0.9
4,836,819	+		PS417_22325	0.72	+1.0
4,836,820	-		PS417_22325	0.72	+0.6
4,836,820	-		PS417_22325	0.72	+2.6
4,836,829	-		PS417_22325	0.73	+0.1
4,836,854	+		PS417_22325	0.74	+0.6
4,836,855	-		PS417_22325	0.74	+0.5
4,836,855	-		PS417_22325	0.74	+0.3
4,836,870	-		PS417_22325	0.75	+0.9
4,836,870	-		PS417_22325	0.75	-0.0
4,836,899	+		PS417_22325	0.78	+0.7
4,836,900	-		PS417_22325	0.78	+0.9
4,836,918	-		PS417_22325	0.79	+0.3
4,837,196	+				+0.6
4,837,218	-				-0.1
4,837,274	-				+0.2
4,837,785	+		PS417_22330	0.43	-1.0
4,837,786	-		PS417_22330	0.43	-0.3
4,837,831	-		PS417_22330	0.47	-0.6