Strain Fitness in Pseudomonas simiae WCS417 around PS417_21685
Experiment: Carbon source L-Ornithine 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Carbon source L-Ornithine 5 mM |
|---|---|---|---|---|---|
| remove | |||||
| 4,702,945 | + | -0.1 | |||
| 4,702,946 | - | -1.1 | |||
| 4,703,233 | + | PS417_21680 | 0.37 | -0.8 | |
| 4,703,259 | + | PS417_21680 | 0.39 | -2.2 | |
| 4,703,259 | + | PS417_21680 | 0.39 | -2.3 | |
| 4,703,883 | - | +0.1 | |||
| 4,704,171 | + | -0.5 | |||
| 4,704,176 | + | -1.3 | |||
| 4,704,177 | - | +0.8 | |||
| 4,704,189 | + | -0.6 | |||
| 4,704,190 | - | -0.5 | |||
| 4,704,190 | - | -0.2 | |||
| 4,704,213 | - | -0.3 | |||
| 4,704,540 | - | PS417_21690 | 0.24 | +0.2 | |
| 4,704,632 | + | PS417_21690 | 0.31 | -0.4 | |
| 4,704,632 | + | PS417_21690 | 0.31 | -1.4 | |
| 4,704,633 | - | PS417_21690 | 0.31 | +1.5 | |
| 4,704,767 | + | PS417_21690 | 0.41 | +1.1 | |
| 4,704,767 | + | +2.8 | |||
| 4,704,767 | + | PS417_21690 | 0.41 | -0.4 | |
| 4,704,768 | - | PS417_21690 | 0.41 | +0.4 | |
| 4,704,851 | + | PS417_21690 | 0.48 | +1.2 | |
| 4,705,089 | + | PS417_21690 | 0.65 | -0.6 | |
| 4,705,089 | + | PS417_21690 | 0.65 | -0.5 |
Or see this region's nucleotide sequence