Strain Fitness in Pseudomonas simiae WCS417 around PS417_08560

Experiment: Carbon source L-Ornithine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source L-Ornithine 5 mM
1,869,494	-				+0.5
1,869,494	-				+0.0
1,869,518	-				-1.2
1,869,518	-				-1.2
1,869,518	-				+0.1
1,869,518	-				+0.9
1,869,518	-				+1.4
1,869,520	-				-0.4
1,869,520	-				-0.4
1,869,520	-				+1.4
1,869,520	-				-0.3
1,869,520	-				-0.2
1,869,570	+				-0.2
1,869,571	-				-0.6
1,869,583	+				-0.5
1,869,583	+				+0.5
1,869,584	-				+2.9
1,869,653	+				-0.1
1,869,657	+				-0.2
1,869,667	-				-0.5
1,869,739	+				-0.5
1,869,758	+				-1.4
1,869,758	+				-0.2
1,869,759	-				+0.7
1,869,991	+		PS417_08560	0.18	+0.8
1,869,992	-		PS417_08560	0.18	+0.7
1,870,112	-		PS417_08560	0.28	+0.1
1,870,149	+		PS417_08560	0.31	+0.2
1,870,150	-		PS417_08560	0.31	-0.8
1,870,179	+		PS417_08560	0.33	+0.5
1,870,179	+		PS417_08560	0.33	+0.1
1,870,198	+		PS417_08560	0.35	+0.7
1,870,199	-				-1.0
1,870,360	+		PS417_08560	0.48	-0.7
1,870,360	+		PS417_08560	0.48	-0.1
1,870,361	-		PS417_08560	0.48	-0.1
1,870,436	-		PS417_08560	0.55	-0.6
1,870,552	+		PS417_08560	0.64	-0.8
1,870,552	+		PS417_08560	0.64	+1.0
1,870,553	-		PS417_08560	0.64	+3.7
1,870,553	-		PS417_08560	0.64	+0.2
1,870,553	-		PS417_08560	0.64	+0.0
1,870,693	+		PS417_08560	0.76	+0.5
1,870,693	+		PS417_08560	0.76	+0.0
1,870,693	+		PS417_08560	0.76	-0.1
1,870,735	+		PS417_08560	0.79	-0.0
1,870,736	-		PS417_08560	0.79	-0.1
1,870,738	+		PS417_08560	0.80	-0.2
1,870,738	+		PS417_08560	0.80	-0.0
1,870,739	-		PS417_08560	0.80	+0.0
1,870,946	-				+0.4
1,871,035	+				-0.2
1,871,065	-				-0.4
1,871,068	+				-0.4
1,871,069	-				-0.0
1,871,069	-				-1.0
1,871,125	+				-0.1
1,871,126	-				+1.4
1,871,126	-				+0.1
1,871,246	-		PS417_08565	0.15	-0.4
1,871,246	-		PS417_08565	0.15	+0.0
1,871,293	+				-0.2
1,871,293	+		PS417_08565	0.27	+0.5
1,871,293	+		PS417_08565	0.27	+0.0
1,871,294	-		PS417_08565	0.27	+0.1
1,871,399	-		PS417_08565	0.54	+1.1
1,871,399	-		PS417_08565	0.54	-0.4
1,871,602	+				-0.6
1,871,641	-				+0.2
1,871,856	-		PS417_08570	0.26	+1.4
1,871,886	-		PS417_08570	0.32	-2.2