Experiment: Carbon source L-Ornithine 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_06145 and PS417_06150 are separated by 54 nucleotides PS417_06150 and PS417_06155 overlap by 1 nucleotides PS417_06155 and PS417_06160 are separated by 255 nucleotides
PS417_06145: PS417_06145 - hypothetical protein, at 1,362,107 to 1,362,484
_06145
PS417_06150: PS417_06150 - SAM-dependent methlyltransferase, at 1,362,539 to 1,363,348
_06150
PS417_06155: PS417_06155 - succinyl-diaminopimelate desuccinylase, at 1,363,348 to 1,364,499
_06155
PS417_06160: PS417_06160 - beta-(1-3)-glucosyl transferase, at 1,364,755 to 1,367,346
_06160
Position (kb) 1363
1364
1365 Strain fitness (log2 ratio) -1
0
1
2 at 1362.536 kb on + strand at 1362.541 kb on - strand at 1362.768 kb on + strand, within PS417_06150 at 1362.769 kb on - strand, within PS417_06150 at 1363.012 kb on + strand, within PS417_06150 at 1363.069 kb on - strand, within PS417_06150 at 1363.251 kb on + strand, within PS417_06150 at 1364.522 kb on - strand at 1364.705 kb on + strand at 1364.708 kb on - strand at 1364.736 kb on + strand at 1364.907 kb on - strand at 1365.045 kb on - strand, within PS417_06160 at 1365.276 kb on + strand, within PS417_06160 at 1365.277 kb on - strand, within PS417_06160 at 1365.277 kb on - strand, within PS417_06160 at 1365.404 kb on + strand, within PS417_06160 at 1365.479 kb on + strand, within PS417_06160 at 1365.480 kb on - strand, within PS417_06160 at 1365.482 kb on + strand, within PS417_06160 at 1365.482 kb on + strand, within PS417_06160 at 1365.483 kb on - strand, within PS417_06160
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source L-Ornithine 5 mM remove 1,362,536 + +0.1 1,362,541 - +0.5 1,362,768 + PS417_06150 0.28 -0.3 1,362,769 - PS417_06150 0.28 -0.1 1,363,012 + PS417_06150 0.58 -0.5 1,363,069 - PS417_06150 0.65 +0.3 1,363,251 + PS417_06150 0.88 -0.5 1,364,522 - -0.6 1,364,705 + +0.0 1,364,708 - -0.5 1,364,736 + +0.2 1,364,907 - +0.0 1,365,045 - PS417_06160 0.11 -0.3 1,365,276 + PS417_06160 0.20 +0.1 1,365,277 - PS417_06160 0.20 +0.4 1,365,277 - PS417_06160 0.20 -0.3 1,365,404 + PS417_06160 0.25 +1.5 1,365,479 + PS417_06160 0.28 -0.9 1,365,480 - PS417_06160 0.28 -0.5 1,365,482 + PS417_06160 0.28 +2.3 1,365,482 + PS417_06160 0.28 +0.3 1,365,483 - PS417_06160 0.28 -0.4
Or see this region's nucleotide sequence