Experiment: Carbon source L-Ornithine 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_27175 and PS417_27180 are separated by 316 nucleotides PS417_27180 and PS417_27185 are separated by 273 nucleotides
PS417_27175: PS417_27175 - NAD(P)H-dependent FMN reductase, at 5,866,393 to 5,866,986
_27175
PS417_27180: PS417_27180 - peroxidase, at 5,867,303 to 5,867,941
_27180
PS417_27185: PS417_27185 - porin, at 5,868,215 to 5,869,579
_27185
Position (kb) 5867
5868 Strain fitness (log2 ratio) -1
0
1
2 at 5866.350 kb on + strand at 5866.350 kb on + strand at 5866.350 kb on + strand at 5866.350 kb on + strand at 5866.378 kb on - strand at 5866.394 kb on + strand at 5866.394 kb on + strand at 5866.475 kb on + strand, within PS417_27175 at 5866.579 kb on - strand, within PS417_27175 at 5866.579 kb on - strand, within PS417_27175 at 5866.579 kb on - strand, within PS417_27175 at 5866.631 kb on + strand, within PS417_27175 at 5866.632 kb on - strand, within PS417_27175 at 5866.757 kb on + strand, within PS417_27175 at 5866.871 kb on - strand, within PS417_27175 at 5866.877 kb on + strand, within PS417_27175 at 5867.055 kb on - strand at 5867.199 kb on + strand at 5867.199 kb on + strand at 5867.240 kb on + strand at 5867.527 kb on - strand, within PS417_27180 at 5867.620 kb on - strand, within PS417_27180 at 5867.620 kb on - strand, within PS417_27180 at 5867.933 kb on + strand at 5867.965 kb on - strand at 5868.062 kb on + strand at 5868.062 kb on + strand at 5868.063 kb on - strand at 5868.119 kb on + strand at 5868.119 kb on + strand at 5868.119 kb on + strand at 5868.154 kb on + strand at 5868.209 kb on - strand at 5868.216 kb on + strand at 5868.216 kb on + strand at 5868.296 kb on - strand at 5868.412 kb on + strand, within PS417_27185 at 5868.412 kb on + strand, within PS417_27185 at 5868.412 kb on + strand, within PS417_27185 at 5868.416 kb on + strand, within PS417_27185 at 5868.416 kb on + strand at 5868.417 kb on - strand, within PS417_27185 at 5868.444 kb on + strand, within PS417_27185 at 5868.514 kb on + strand, within PS417_27185 at 5868.515 kb on - strand, within PS417_27185 at 5868.564 kb on + strand, within PS417_27185 at 5868.565 kb on - strand, within PS417_27185 at 5868.660 kb on + strand at 5868.660 kb on + strand, within PS417_27185 at 5868.660 kb on + strand, within PS417_27185 at 5868.678 kb on + strand, within PS417_27185 at 5868.723 kb on + strand, within PS417_27185 at 5868.723 kb on + strand, within PS417_27185 at 5868.741 kb on + strand, within PS417_27185 at 5868.742 kb on - strand, within PS417_27185 at 5868.786 kb on + strand, within PS417_27185 at 5868.787 kb on - strand, within PS417_27185 at 5868.787 kb on - strand, within PS417_27185 at 5868.859 kb on - strand, within PS417_27185 at 5868.879 kb on + strand, within PS417_27185 at 5868.880 kb on - strand, within PS417_27185 at 5868.882 kb on + strand, within PS417_27185 at 5868.882 kb on + strand, within PS417_27185 at 5868.882 kb on + strand, within PS417_27185 at 5868.883 kb on - strand, within PS417_27185 at 5868.883 kb on - strand, within PS417_27185 at 5868.883 kb on - strand, within PS417_27185 at 5868.883 kb on - strand, within PS417_27185 at 5868.916 kb on - strand, within PS417_27185 at 5868.916 kb on - strand, within PS417_27185 at 5868.930 kb on + strand, within PS417_27185 at 5868.930 kb on + strand, within PS417_27185 at 5868.931 kb on - strand, within PS417_27185
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source L-Ornithine 10 mM remove 5,866,350 + +0.3 5,866,350 + +1.6 5,866,350 + +0.1 5,866,350 + -0.4 5,866,378 - -0.3 5,866,394 + -0.3 5,866,394 + -0.0 5,866,475 + PS417_27175 0.14 -0.1 5,866,579 - PS417_27175 0.31 +0.2 5,866,579 - PS417_27175 0.31 +1.1 5,866,579 - PS417_27175 0.31 +0.3 5,866,631 + PS417_27175 0.40 +0.9 5,866,632 - PS417_27175 0.40 +0.1 5,866,757 + PS417_27175 0.61 -0.2 5,866,871 - PS417_27175 0.80 -0.4 5,866,877 + PS417_27175 0.81 -0.9 5,867,055 - -0.6 5,867,199 + -0.0 5,867,199 + +0.1 5,867,240 + +0.9 5,867,527 - PS417_27180 0.35 +1.0 5,867,620 - PS417_27180 0.50 +0.1 5,867,620 - PS417_27180 0.50 +2.1 5,867,933 + +0.1 5,867,965 - -0.9 5,868,062 + +1.5 5,868,062 + +0.0 5,868,063 - +0.3 5,868,119 + +0.0 5,868,119 + -1.1 5,868,119 + -0.7 5,868,154 + -0.4 5,868,209 - +0.2 5,868,216 + +0.0 5,868,216 + -0.0 5,868,296 - -0.0 5,868,412 + PS417_27185 0.14 -0.3 5,868,412 + PS417_27185 0.14 +0.9 5,868,412 + PS417_27185 0.14 -0.7 5,868,416 + PS417_27185 0.15 -0.5 5,868,416 + -1.3 5,868,417 - PS417_27185 0.15 -0.4 5,868,444 + PS417_27185 0.17 +0.5 5,868,514 + PS417_27185 0.22 -1.1 5,868,515 - PS417_27185 0.22 +0.6 5,868,564 + PS417_27185 0.26 -0.4 5,868,565 - PS417_27185 0.26 -1.3 5,868,660 + +0.1 5,868,660 + PS417_27185 0.33 +0.5 5,868,660 + PS417_27185 0.33 +1.6 5,868,678 + PS417_27185 0.34 -0.6 5,868,723 + PS417_27185 0.37 +0.7 5,868,723 + PS417_27185 0.37 -0.2 5,868,741 + PS417_27185 0.39 +0.5 5,868,742 - PS417_27185 0.39 +1.7 5,868,786 + PS417_27185 0.42 +0.0 5,868,787 - PS417_27185 0.42 +0.1 5,868,787 - PS417_27185 0.42 +0.2 5,868,859 - PS417_27185 0.47 +0.1 5,868,879 + PS417_27185 0.49 -1.5 5,868,880 - PS417_27185 0.49 -0.1 5,868,882 + PS417_27185 0.49 -0.6 5,868,882 + PS417_27185 0.49 +0.1 5,868,882 + PS417_27185 0.49 -0.2 5,868,883 - PS417_27185 0.49 +0.3 5,868,883 - PS417_27185 0.49 -0.6 5,868,883 - PS417_27185 0.49 -0.4 5,868,883 - PS417_27185 0.49 -0.4 5,868,916 - PS417_27185 0.51 +0.1 5,868,916 - PS417_27185 0.51 +1.7 5,868,930 + PS417_27185 0.52 +0.5 5,868,930 + PS417_27185 0.52 -0.0 5,868,931 - PS417_27185 0.52 +0.3
Or see this region's nucleotide sequence