Experiment: Carbon source L-Ornithine 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_26630 and PS417_26635 are separated by 61 nucleotides PS417_26635 and PS417_26640 are separated by 330 nucleotides PS417_26640 and PS417_26645 are separated by 274 nucleotides PS417_26645 and PS417_26650 overlap by 8 nucleotides
PS417_26630: PS417_26630 - transcriptional regulator, at 5,755,380 to 5,756,009
_26630
PS417_26635: PS417_26635 - hypothetical protein, at 5,756,071 to 5,756,310
_26635
PS417_26640: PS417_26640 - hypothetical protein, at 5,756,641 to 5,756,859
_26640
PS417_26645: PS417_26645 - chemotaxis protein, at 5,757,134 to 5,757,589
_26645
PS417_26650: PS417_26650 - histidine kinase, at 5,757,582 to 5,763,386
_26650
Position (kb) 5756
5757 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5755.713 kb on + strand, within PS417_26630 at 5755.713 kb on + strand, within PS417_26630 at 5755.774 kb on + strand, within PS417_26630 at 5755.801 kb on + strand, within PS417_26630 at 5755.802 kb on - strand, within PS417_26630 at 5756.119 kb on + strand, within PS417_26635 at 5756.119 kb on + strand, within PS417_26635 at 5756.119 kb on + strand, within PS417_26635 at 5756.272 kb on + strand, within PS417_26635 at 5756.322 kb on + strand at 5756.408 kb on - strand at 5756.498 kb on - strand at 5756.498 kb on - strand at 5756.642 kb on + strand at 5756.652 kb on + strand at 5756.652 kb on + strand at 5756.652 kb on + strand at 5756.652 kb on + strand at 5756.652 kb on + strand at 5756.653 kb on - strand at 5756.653 kb on - strand at 5756.653 kb on - strand at 5756.653 kb on - strand at 5756.653 kb on - strand at 5756.656 kb on + strand at 5756.656 kb on + strand at 5756.656 kb on + strand at 5756.656 kb on + strand at 5756.656 kb on + strand at 5756.656 kb on + strand at 5756.656 kb on + strand at 5756.657 kb on - strand at 5756.657 kb on - strand at 5756.657 kb on - strand at 5756.702 kb on + strand, within PS417_26640 at 5756.702 kb on + strand, within PS417_26640 at 5756.703 kb on - strand, within PS417_26640 at 5756.778 kb on - strand, within PS417_26640 at 5756.778 kb on - strand, within PS417_26640 at 5757.043 kb on - strand at 5757.082 kb on - strand at 5757.125 kb on + strand at 5757.126 kb on - strand at 5757.126 kb on - strand at 5757.135 kb on + strand at 5757.136 kb on - strand at 5757.136 kb on - strand at 5757.136 kb on - strand at 5757.252 kb on + strand, within PS417_26645 at 5757.252 kb on + strand, within PS417_26645 at 5757.311 kb on - strand, within PS417_26645 at 5757.311 kb on - strand, within PS417_26645
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source L-Ornithine 10 mM remove 5,755,713 + PS417_26630 0.53 +0.5 5,755,713 + PS417_26630 0.53 -0.3 5,755,774 + PS417_26630 0.63 +0.5 5,755,801 + PS417_26630 0.67 -2.6 5,755,802 - PS417_26630 0.67 +0.4 5,756,119 + PS417_26635 0.20 -1.0 5,756,119 + PS417_26635 0.20 +0.0 5,756,119 + PS417_26635 0.20 +2.7 5,756,272 + PS417_26635 0.84 +2.2 5,756,322 + +0.7 5,756,408 - -0.6 5,756,498 - -0.4 5,756,498 - +0.2 5,756,642 + +0.7 5,756,652 + +0.1 5,756,652 + +3.0 5,756,652 + +0.7 5,756,652 + +0.1 5,756,652 + -0.3 5,756,653 - -0.1 5,756,653 - +0.2 5,756,653 - +0.0 5,756,653 - +0.1 5,756,653 - +0.1 5,756,656 + +0.1 5,756,656 + -1.5 5,756,656 + +0.2 5,756,656 + +0.0 5,756,656 + +0.1 5,756,656 + -0.5 5,756,656 + -0.2 5,756,657 - -0.1 5,756,657 - -0.9 5,756,657 - -0.1 5,756,702 + PS417_26640 0.28 +0.1 5,756,702 + PS417_26640 0.28 +0.8 5,756,703 - PS417_26640 0.28 -0.3 5,756,778 - PS417_26640 0.63 +3.0 5,756,778 - PS417_26640 0.63 +0.8 5,757,043 - +0.1 5,757,082 - +0.2 5,757,125 + +0.5 5,757,126 - -0.5 5,757,126 - +0.1 5,757,135 + -1.9 5,757,136 - -0.1 5,757,136 - +0.1 5,757,136 - -0.9 5,757,252 + PS417_26645 0.26 -0.3 5,757,252 + PS417_26645 0.26 +0.5 5,757,311 - PS417_26645 0.39 -0.8 5,757,311 - PS417_26645 0.39 -0.9
Or see this region's nucleotide sequence