Strain Fitness in Pseudomonas simiae WCS417 around PS417_25905

Experiment: Carbon source D-Mannitol 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source D-Mannitol 5 mM
5,594,573	+				+2.3
5,594,573	+				+0.6
5,594,573	+				+1.1
5,594,573	+				-0.3
5,594,574	-				+0.3
5,594,574	-				-0.0
5,594,574	-				+0.5
5,594,588	+				-0.2
5,595,129	+		PS417_25900	0.54	+0.0
5,595,222	+		PS417_25900	0.64	-0.6
5,595,222	+		PS417_25900	0.64	-0.9
5,595,222	+		PS417_25900	0.64	-0.3
5,595,223	-		PS417_25900	0.64	-0.3
5,595,223	-		PS417_25900	0.64	+0.1
5,595,223	-		PS417_25900	0.64	+0.7
5,595,223	-		PS417_25900	0.64	+0.1
5,595,292	-		PS417_25900	0.72	+0.4
5,595,292	-		PS417_25900	0.72	-0.3
5,595,530	+				-1.0
5,595,530	+				+0.4
5,595,777	+		PS417_25905	0.46	-1.3
5,595,778	-		PS417_25905	0.46	-0.6
5,595,882	+		PS417_25905	0.69	-1.5
5,595,883	-		PS417_25905	0.69	-0.6
5,596,120	+				-0.4
5,596,121	-				-0.2
5,596,121	-				-0.1
5,596,122	+				-0.5
5,596,123	-				+0.4
5,596,407	-		PS417_25910	0.13	-0.2
5,596,407	-		PS417_25910	0.13	-0.3
5,596,517	+		PS417_25910	0.20	-1.0
5,596,518	-		PS417_25910	0.20	-0.2
5,596,518	-		PS417_25910	0.20	+0.1
5,596,523	+		PS417_25910	0.20	-0.4
5,596,589	-		PS417_25910	0.24	-0.1