Strain Fitness in Pseudomonas simiae WCS417 around PS417_24810

Experiment: Carbon source D-Mannitol 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source D-Mannitol 5 mM
5,379,924	-		PS417_24805	0.67	+0.0
5,379,924	-		PS417_24805	0.67	-2.0
5,379,924	-		PS417_24805	0.67	-0.6
5,379,924	-		PS417_24805	0.67	-0.9
5,380,428	-				+0.2
5,380,428	-				+0.9
5,380,547	+				-0.1
5,380,550	+				+0.1
5,380,879	+				-0.7
5,380,879	+				-0.8
5,380,880	-				+0.5
5,380,919	-				+0.7
5,381,261	-		PS417_24810	0.29	+0.4
5,381,361	+				+0.1
5,381,361	+		PS417_24810	0.36	-1.4
5,381,362	-		PS417_24810	0.36	-0.2
5,381,511	+		PS417_24810	0.46	-0.2
5,381,517	+		PS417_24810	0.46	-0.1
5,381,640	+		PS417_24810	0.54	-0.3
5,381,755	+		PS417_24810	0.62	-0.3
5,381,879	-		PS417_24810	0.70	-1.3
5,381,879	-		PS417_24810	0.70	-0.8
5,381,931	-		PS417_24810	0.73	-2.6
5,381,963	-		PS417_24810	0.75	-0.7
5,381,965	+		PS417_24810	0.76	-1.3
5,381,965	+		PS417_24810	0.76	-1.3
5,381,965	+		PS417_24810	0.76	-0.3
5,381,965	+		PS417_24810	0.76	-0.4
5,381,965	+		PS417_24810	0.76	-2.6
5,381,966	-		PS417_24810	0.76	-1.0
5,381,966	-		PS417_24810	0.76	-1.0
5,381,966	-		PS417_24810	0.76	-1.3
5,381,966	-		PS417_24810	0.76	+0.4
5,381,966	-		PS417_24810	0.76	-0.8
5,381,966	-		PS417_24810	0.76	-1.9
5,382,316	-				-0.6
5,382,334	+				-0.2
5,382,347	+				-0.5
5,382,348	-				-0.8
5,382,348	-				-0.4
5,382,436	-				-0.7
5,382,464	-				-0.2
5,382,473	-				+0.1
5,382,485	+				-1.0
5,382,485	+				+0.7
5,382,485	+				-0.1
5,382,485	+				+0.1
5,382,486	-				-0.3
5,382,508	+				-0.6
5,382,617	+				-0.5
5,382,617	+				-0.5
5,382,617	+				-0.1
5,382,618	-				-0.5
5,382,713	+		PS417_24815	0.15	-0.1
5,382,713	+		PS417_24815	0.15	-0.1
5,382,713	+		PS417_24815	0.15	+0.3
5,382,714	-		PS417_24815	0.15	-0.4
5,382,714	-		PS417_24815	0.15	+0.2
5,382,761	-		PS417_24815	0.19	+1.9
5,382,846	-		PS417_24815	0.25	-0.1
5,382,926	+		PS417_24815	0.30	+0.4
5,382,926	+		PS417_24815	0.30	+0.3
5,382,926	+		PS417_24815	0.30	+0.0
5,382,927	-		PS417_24815	0.30	+1.7
5,382,927	-		PS417_24815	0.30	-0.0
5,382,927	-		PS417_24815	0.30	+0.2
5,382,938	+		PS417_24815	0.31	+0.6
5,382,939	-		PS417_24815	0.31	+0.6
5,382,939	-		PS417_24815	0.31	-0.1
5,383,320	-		PS417_24815	0.58	-1.5
5,383,320	-		PS417_24815	0.58	-0.3