Strain Fitness in Pseudomonas simiae WCS417 around PS417_12720

Experiment: Carbon source D-Mannitol 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source D-Mannitol 5 mM
2,767,255	+		PS417_12715	0.47	-3.9
2,767,267	-		PS417_12715	0.48	-2.0
2,767,524	+		PS417_12715	0.67	-5.2
2,767,524	+				-1.1
2,767,524	+		PS417_12715	0.67	-3.0
2,767,524	+		PS417_12715	0.67	-5.8
2,767,561	-		PS417_12715	0.70	-2.8
2,767,621	-		PS417_12715	0.75	-0.4
2,767,683	+		PS417_12715	0.79	-2.4
2,767,684	-		PS417_12715	0.79	-4.0
2,767,684	-		PS417_12715	0.79	-3.5
2,767,684	-		PS417_12715	0.79	-1.4
2,767,924	+				-1.4
2,768,001	+				-3.5
2,768,001	+				-4.6
2,768,001	+				-2.6
2,768,002	-				+1.2
2,768,002	-				-1.0
2,768,002	-				-2.6
2,768,002	-				-3.5
2,768,242	+				-3.0
2,768,242	+				-1.5
2,768,242	+				-0.5
2,768,243	-				-1.0
2,768,243	-				-1.8
2,768,244	+				-0.5
2,768,245	-				+0.3
2,768,312	+				+0.5
2,768,313	-				+0.3
2,768,314	+				-1.1
2,768,314	+				-1.2
2,768,314	+				+0.2
2,768,314	+				-0.5
2,768,315	-				+0.0
2,768,315	-				-2.1
2,768,340	-				-0.2
2,768,389	-				-1.6
2,768,389	-				-0.4
2,768,507	-				+1.7
2,768,778	-				+0.2
2,768,817	-				+0.4
2,769,117	-		PS417_12720	0.14	+0.7
2,769,117	-		PS417_12720	0.14	-0.3
2,769,167	-		PS417_12720	0.15	-0.4
2,769,216	+		PS417_12720	0.15	-1.0
2,769,284	+		PS417_12720	0.16	+0.1
2,769,284	+		PS417_12720	0.16	-1.0
2,769,405	+		PS417_12720	0.18	+0.2
2,769,686	-				+2.8
2,769,746	+		PS417_12720	0.24	-0.0
2,769,746	+		PS417_12720	0.24	-0.3
2,769,746	+		PS417_12720	0.24	+0.3
2,769,747	-		PS417_12720	0.24	-0.5
2,769,747	-		PS417_12720	0.24	+0.0
2,769,795	+		PS417_12720	0.24	-0.9
2,769,795	+		PS417_12720	0.24	-0.4
2,769,795	+				+2.8
2,769,859	+		PS417_12720	0.25	-2.2
2,769,877	+				+1.2
2,769,877	+		PS417_12720	0.26	+0.4
2,769,939	+		PS417_12720	0.27	+1.3
2,769,940	-		PS417_12720	0.27	-0.0
2,769,998	+		PS417_12720	0.28	+0.5
2,769,999	-		PS417_12720	0.28	-0.2
2,770,097	+		PS417_12720	0.29	+0.1
2,770,098	-		PS417_12720	0.29	-0.6
2,770,098	-		PS417_12720	0.29	+1.0
2,770,098	-		PS417_12720	0.29	-0.1
2,770,100	-		PS417_12720	0.29	+0.4
2,770,100	-				-0.8
2,770,100	-		PS417_12720	0.29	-0.0
2,770,233	+		PS417_12720	0.31	-0.2
2,770,234	-		PS417_12720	0.31	+0.0
2,770,288	-		PS417_12720	0.32	-0.1
2,770,355	+		PS417_12720	0.33	+0.7
2,770,356	-		PS417_12720	0.33	+0.6
2,770,419	+		PS417_12720	0.34	+1.5
2,770,471	-		PS417_12720	0.35	-1.1
2,770,562	-		PS417_12720	0.36	-2.0
2,770,581	-		PS417_12720	0.37	+0.2
2,770,583	+		PS417_12720	0.37	-0.8
2,770,583	+		PS417_12720	0.37	-0.1
2,770,584	-		PS417_12720	0.37	-0.7
2,770,703	+		PS417_12720	0.39	+0.1
2,770,819	+		PS417_12720	0.40	+0.2
2,770,879	+		PS417_12720	0.41	-1.3
2,770,879	+		PS417_12720	0.41	-0.9
2,771,028	+		PS417_12720	0.44	-0.3
2,771,028	+		PS417_12720	0.44	-0.1
2,771,050	+		PS417_12720	0.44	-0.0
2,771,218	+		PS417_12720	0.47	-1.0
2,771,257	+		PS417_12720	0.47	-0.2
2,771,258	-		PS417_12720	0.47	-0.3
2,771,398	-		PS417_12720	0.49	-0.9
2,771,498	+		PS417_12720	0.51	-0.2
2,771,498	+		PS417_12720	0.51	-2.0
2,771,630	+		PS417_12720	0.53	-0.4
2,771,738	+		PS417_12720	0.55	+0.6
2,771,954	+		PS417_12720	0.58	+0.5
2,772,465	-		PS417_12720	0.66	-2.1
2,772,465	-		PS417_12720	0.66	+0.1
2,772,578	-		PS417_12720	0.68	+1.0
2,772,578	-		PS417_12720	0.68	-0.3
2,772,581	+		PS417_12720	0.68	-0.9
2,772,581	+		PS417_12720	0.68	-1.4
2,772,646	-		PS417_12720	0.69	-0.5
2,772,646	-		PS417_12720	0.69	-1.0
2,773,153	-		PS417_12720	0.77	+0.4
2,773,153	-		PS417_12720	0.77	-0.0
2,773,194	-		PS417_12720	0.78	+1.3
2,773,375	+		PS417_12720	0.80	+0.7
2,773,376	-		PS417_12720	0.80	-1.4
2,773,379	+		PS417_12720	0.80	-0.4
2,773,600	-		PS417_12720	0.84	+0.0
2,773,611	+		PS417_12720	0.84	+0.0
2,773,615	-		PS417_12720	0.84	-2.0
2,773,632	-		PS417_12720	0.84	-0.4
2,773,632	-		PS417_12720	0.84	-0.8
2,773,716	+		PS417_12720	0.86	+0.3
2,774,041	-				+1.2
2,774,041	-				-0.9
2,774,073	+				-0.0
2,774,073	+				-0.3
2,774,073	+				-0.1
2,774,246	+				+1.2
2,774,268	+				-0.4
2,774,269	-				+0.7
2,774,436	-				-0.3
2,774,495	-				+0.6
2,774,495	-				-0.1
2,774,495	-				+0.0
2,774,574	-				+0.9
2,774,574	-				-0.3
2,774,632	+				+0.2
2,774,633	-				-0.2
2,774,646	+				-0.1
2,774,646	+				-0.3
2,774,646	+				+0.2
2,774,646	+				-0.5
2,774,647	-				+0.8
2,774,648	+				+0.4
2,774,649	-				-0.3
2,774,649	-				-0.8
2,774,664	+				-0.4
2,774,664	+				+1.9
2,774,665	-				+0.4
2,774,665	-				-1.8
2,774,709	+				+2.5
2,774,729	-				+0.2
2,774,757	+				+0.4
2,774,757	+				-0.4
2,774,903	-		PS417_12725	0.16	-4.3
2,775,063	+		PS417_12725	0.32	-2.9
2,775,115	-		PS417_12725	0.38	-3.5
2,775,525	+		PS417_12725	0.81	-3.5