Experiment: Carbon source L-Citrulline 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_03820 and PS417_03825 overlap by 4 nucleotides PS417_03825 and PS417_03830 are separated by 130 nucleotides
PS417_03820: PS417_03820 - ribosomal large subunit pseudouridine synthase D, at 861,582 to 862,544
_03820
PS417_03825: PS417_03825 - laccase, at 862,541 to 863,266
_03825
PS417_03830: PS417_03830 - protein disaggregation chaperone, at 863,397 to 865,961
_03830
Position (kb) 862
863
864 Strain fitness (log2 ratio) -2
-1
0
1
2 at 861.572 kb on + strand at 862.717 kb on + strand, within PS417_03825 at 862.718 kb on - strand, within PS417_03825 at 862.974 kb on + strand, within PS417_03825 at 862.974 kb on + strand, within PS417_03825 at 862.974 kb on + strand, within PS417_03825 at 862.975 kb on - strand, within PS417_03825 at 863.117 kb on + strand, within PS417_03825 at 863.117 kb on + strand, within PS417_03825 at 863.118 kb on - strand, within PS417_03825 at 863.118 kb on - strand, within PS417_03825 at 863.118 kb on - strand, within PS417_03825 at 863.118 kb on - strand, within PS417_03825 at 863.118 kb on - strand, within PS417_03825 at 863.118 kb on - strand, within PS417_03825 at 863.119 kb on + strand, within PS417_03825 at 863.119 kb on + strand, within PS417_03825 at 863.119 kb on + strand, within PS417_03825 at 863.120 kb on - strand, within PS417_03825 at 863.248 kb on + strand at 863.249 kb on - strand at 863.324 kb on + strand at 863.324 kb on + strand at 863.325 kb on - strand at 863.325 kb on - strand at 863.325 kb on - strand at 863.325 kb on - strand at 863.332 kb on + strand at 863.363 kb on + strand at 863.364 kb on - strand at 863.364 kb on - strand at 863.366 kb on - strand at 863.396 kb on - strand at 863.402 kb on + strand at 863.426 kb on - strand at 863.531 kb on + strand at 863.642 kb on + strand at 863.642 kb on + strand at 863.642 kb on + strand at 863.642 kb on + strand at 863.643 kb on - strand at 863.643 kb on - strand at 863.643 kb on - strand at 863.882 kb on + strand, within PS417_03830 at 863.886 kb on + strand, within PS417_03830 at 863.886 kb on + strand, within PS417_03830 at 863.887 kb on - strand, within PS417_03830 at 864.093 kb on - strand, within PS417_03830
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source L-Citrulline 5 mM remove 861,572 + +0.8 862,717 + PS417_03825 0.24 +0.1 862,718 - PS417_03825 0.24 -0.3 862,974 + PS417_03825 0.60 -0.6 862,974 + PS417_03825 0.60 -0.1 862,974 + PS417_03825 0.60 -1.4 862,975 - PS417_03825 0.60 -0.3 863,117 + PS417_03825 0.79 -0.1 863,117 + PS417_03825 0.79 -0.1 863,118 - PS417_03825 0.79 -0.2 863,118 - PS417_03825 0.79 +0.7 863,118 - PS417_03825 0.79 +0.7 863,118 - PS417_03825 0.79 +0.2 863,118 - PS417_03825 0.79 +0.3 863,118 - PS417_03825 0.79 +0.3 863,119 + PS417_03825 0.80 -0.6 863,119 + PS417_03825 0.80 -0.5 863,119 + PS417_03825 0.80 +2.3 863,120 - PS417_03825 0.80 -0.2 863,248 + -0.4 863,249 - -0.5 863,324 + -0.6 863,324 + -0.3 863,325 - -0.4 863,325 - -0.6 863,325 - -0.2 863,325 - -0.4 863,332 + -0.2 863,363 + -0.1 863,364 - +0.1 863,364 - -0.3 863,366 - -2.5 863,396 - +0.5 863,402 + -0.0 863,426 - +0.8 863,531 + +0.9 863,642 + +0.8 863,642 + +0.7 863,642 + +0.2 863,642 + -0.6 863,643 - -0.2 863,643 - -0.2 863,643 - -0.0 863,882 + PS417_03830 0.19 +0.1 863,886 + PS417_03830 0.19 +1.8 863,886 + PS417_03830 0.19 -0.5 863,887 - PS417_03830 0.19 -0.4 864,093 - PS417_03830 0.27 -0.1
Or see this region's nucleotide sequence