Experiment: Carbon source L-Citrulline 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_24460 and PS417_24465 are separated by 83 nucleotides PS417_24465 and PS417_24470 are separated by 0 nucleotides PS417_24470 and PS417_24475 are separated by 48 nucleotides PS417_24475 and PS417_24480 overlap by 4 nucleotides
PS417_24460: PS417_24460 - hypothetical protein, at 5,310,574 to 5,310,990
_24460
PS417_24465: PS417_24465 - metallopeptidase, at 5,311,074 to 5,311,961
_24465
PS417_24470: PS417_24470 - hypothetical protein, at 5,311,962 to 5,312,933
_24470
PS417_24475: PS417_24475 - HAD family hydrolase, at 5,312,982 to 5,313,569
_24475
PS417_24480: PS417_24480 - palmitoyl-CoA hydrolase, at 5,313,566 to 5,314,435
_24480
Position (kb) 5311
5312
5313 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5310.976 kb on + strand at 5310.988 kb on + strand at 5311.009 kb on - strand at 5311.015 kb on - strand at 5311.015 kb on - strand at 5311.015 kb on - strand at 5311.017 kb on + strand at 5311.018 kb on - strand at 5311.018 kb on - strand at 5311.018 kb on - strand at 5311.018 kb on - strand at 5311.078 kb on + strand at 5311.401 kb on + strand, within PS417_24465 at 5311.401 kb on + strand, within PS417_24465 at 5311.401 kb on + strand, within PS417_24465 at 5311.402 kb on - strand, within PS417_24465 at 5311.506 kb on + strand, within PS417_24465 at 5311.506 kb on + strand, within PS417_24465 at 5311.507 kb on - strand, within PS417_24465 at 5311.575 kb on + strand, within PS417_24465 at 5311.959 kb on + strand at 5311.960 kb on - strand at 5311.960 kb on - strand at 5312.032 kb on + strand at 5312.173 kb on - strand, within PS417_24470 at 5312.173 kb on - strand, within PS417_24470 at 5312.405 kb on - strand, within PS417_24470 at 5312.527 kb on - strand, within PS417_24470 at 5312.527 kb on - strand, within PS417_24470 at 5312.556 kb on + strand, within PS417_24470 at 5312.557 kb on - strand, within PS417_24470 at 5312.557 kb on - strand, within PS417_24470 at 5312.557 kb on - strand, within PS417_24470 at 5312.685 kb on + strand, within PS417_24470 at 5312.685 kb on + strand, within PS417_24470 at 5312.686 kb on - strand, within PS417_24470 at 5312.686 kb on - strand, within PS417_24470 at 5312.686 kb on - strand, within PS417_24470 at 5312.686 kb on - strand, within PS417_24470 at 5312.686 kb on - strand, within PS417_24470 at 5312.686 kb on - strand, within PS417_24470 at 5312.686 kb on - strand, within PS417_24470 at 5312.686 kb on - strand, within PS417_24470 at 5312.686 kb on - strand, within PS417_24470 at 5312.707 kb on - strand, within PS417_24470 at 5312.707 kb on - strand, within PS417_24470 at 5312.808 kb on + strand, within PS417_24470 at 5312.808 kb on + strand at 5312.809 kb on - strand, within PS417_24470 at 5312.809 kb on - strand, within PS417_24470 at 5312.817 kb on + strand, within PS417_24470 at 5312.897 kb on + strand at 5312.897 kb on + strand at 5312.898 kb on - strand at 5312.920 kb on + strand at 5312.921 kb on - strand at 5312.921 kb on - strand at 5312.921 kb on - strand at 5312.983 kb on + strand at 5312.983 kb on + strand at 5312.983 kb on + strand at 5313.552 kb on + strand at 5313.553 kb on - strand at 5313.639 kb on + strand at 5313.640 kb on - strand at 5313.697 kb on - strand, within PS417_24480 at 5313.766 kb on + strand, within PS417_24480 at 5313.767 kb on - strand, within PS417_24480 at 5313.847 kb on - strand, within PS417_24480 at 5313.847 kb on - strand at 5313.900 kb on + strand, within PS417_24480 at 5313.901 kb on - strand, within PS417_24480 at 5313.901 kb on - strand, within PS417_24480 at 5313.901 kb on - strand, within PS417_24480
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source L-Citrulline 5 mM remove 5,310,976 + +0.3 5,310,988 + -0.8 5,311,009 - -0.8 5,311,015 - -2.4 5,311,015 - +0.4 5,311,015 - -0.7 5,311,017 + -0.8 5,311,018 - +1.2 5,311,018 - -0.1 5,311,018 - -0.2 5,311,018 - -2.0 5,311,078 + +0.6 5,311,401 + PS417_24465 0.37 -0.6 5,311,401 + PS417_24465 0.37 +0.4 5,311,401 + PS417_24465 0.37 +0.2 5,311,402 - PS417_24465 0.37 -0.4 5,311,506 + PS417_24465 0.49 +2.3 5,311,506 + PS417_24465 0.49 -0.7 5,311,507 - PS417_24465 0.49 -0.8 5,311,575 + PS417_24465 0.56 +0.3 5,311,959 + +0.8 5,311,960 - -1.5 5,311,960 - -1.4 5,312,032 + -1.0 5,312,173 - PS417_24470 0.22 -0.4 5,312,173 - PS417_24470 0.22 +1.2 5,312,405 - PS417_24470 0.46 +0.0 5,312,527 - PS417_24470 0.58 -0.2 5,312,527 - PS417_24470 0.58 -1.2 5,312,556 + PS417_24470 0.61 -0.5 5,312,557 - PS417_24470 0.61 -0.3 5,312,557 - PS417_24470 0.61 -0.5 5,312,557 - PS417_24470 0.61 -0.4 5,312,685 + PS417_24470 0.74 +0.3 5,312,685 + PS417_24470 0.74 -1.9 5,312,686 - PS417_24470 0.74 -1.0 5,312,686 - PS417_24470 0.74 -0.0 5,312,686 - PS417_24470 0.74 -0.8 5,312,686 - PS417_24470 0.74 -0.5 5,312,686 - PS417_24470 0.74 -1.9 5,312,686 - PS417_24470 0.74 -0.1 5,312,686 - PS417_24470 0.74 -0.4 5,312,686 - PS417_24470 0.74 -0.8 5,312,686 - PS417_24470 0.74 -0.1 5,312,707 - PS417_24470 0.77 +0.8 5,312,707 - PS417_24470 0.77 +0.2 5,312,808 + PS417_24470 0.87 -1.8 5,312,808 + +1.0 5,312,809 - PS417_24470 0.87 +0.4 5,312,809 - PS417_24470 0.87 -0.6 5,312,817 + PS417_24470 0.88 +0.4 5,312,897 + -0.2 5,312,897 + -1.1 5,312,898 - +0.4 5,312,920 + -1.2 5,312,921 - -0.0 5,312,921 - +0.6 5,312,921 - -0.1 5,312,983 + +0.8 5,312,983 + -0.1 5,312,983 + -1.5 5,313,552 + -0.4 5,313,553 - +0.4 5,313,639 + +1.0 5,313,640 - +0.2 5,313,697 - PS417_24480 0.15 -0.1 5,313,766 + PS417_24480 0.23 +0.8 5,313,767 - PS417_24480 0.23 +0.4 5,313,847 - PS417_24480 0.32 +0.4 5,313,847 - +1.2 5,313,900 + PS417_24480 0.38 +1.4 5,313,901 - PS417_24480 0.39 +0.5 5,313,901 - PS417_24480 0.39 -1.0 5,313,901 - PS417_24480 0.39 -0.6
Or see this region's nucleotide sequence