Experiment: Carbon source L-Citrulline 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_21330 and PS417_21335 overlap by 4 nucleotides PS417_21335 and PS417_21340 are separated by 32 nucleotides
PS417_21330: PS417_21330 - L-arabinose transporter ATP-binding protein, at 4,635,918 to 4,637,417
_21330
PS417_21335: PS417_21335 - sugar ABC transporter substrate-binding protein, at 4,637,414 to 4,638,394
_21335
PS417_21340: PS417_21340 - short-chain dehydrogenase, at 4,638,427 to 4,639,248
_21340
Position (kb)
4637
4638
4639 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4636.626 kb on + strand, within PS417_21330 at 4636.678 kb on + strand at 4636.678 kb on + strand, within PS417_21330 at 4636.679 kb on - strand, within PS417_21330 at 4636.831 kb on + strand, within PS417_21330 at 4636.831 kb on + strand at 4636.831 kb on + strand, within PS417_21330 at 4636.832 kb on - strand, within PS417_21330 at 4637.586 kb on + strand at 4637.925 kb on + strand at 4637.925 kb on + strand, within PS417_21335 at 4637.925 kb on + strand, within PS417_21335 at 4637.925 kb on + strand, within PS417_21335 at 4637.926 kb on - strand, within PS417_21335 at 4637.926 kb on - strand, within PS417_21335 at 4637.926 kb on - strand, within PS417_21335 at 4637.926 kb on - strand, within PS417_21335 at 4638.018 kb on + strand, within PS417_21335 at 4638.377 kb on + strand at 4638.428 kb on + strand at 4638.437 kb on + strand at 4638.642 kb on - strand, within PS417_21340 at 4638.943 kb on + strand, within PS417_21340 at 4638.944 kb on - strand, within PS417_21340 at 4638.944 kb on - strand, within PS417_21340 at 4638.944 kb on - strand, within PS417_21340 at 4638.944 kb on - strand, within PS417_21340 at 4638.944 kb on - strand, within PS417_21340 at 4639.028 kb on + strand, within PS417_21340 at 4639.029 kb on - strand, within PS417_21340 at 4639.202 kb on + strand at 4639.202 kb on + strand at 4639.203 kb on - strand at 4639.295 kb on + strand at 4639.298 kb on - strand at 4639.298 kb on - strand at 4639.324 kb on - strand at 4639.327 kb on + strand at 4639.345 kb on - strand at 4639.366 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source L-Citrulline 5 mM remove 4,636,626 + PS417_21330 0.47 -1.5 4,636,678 + +2.5 4,636,678 + PS417_21330 0.51 -1.1 4,636,679 - PS417_21330 0.51 -0.2 4,636,831 + PS417_21330 0.61 -1.3 4,636,831 + +1.1 4,636,831 + PS417_21330 0.61 -0.5 4,636,832 - PS417_21330 0.61 -1.6 4,637,586 + +0.5 4,637,925 + +2.1 4,637,925 + PS417_21335 0.52 -1.1 4,637,925 + PS417_21335 0.52 +0.5 4,637,925 + PS417_21335 0.52 -0.0 4,637,926 - PS417_21335 0.52 -0.4 4,637,926 - PS417_21335 0.52 -0.5 4,637,926 - PS417_21335 0.52 +0.1 4,637,926 - PS417_21335 0.52 +0.1 4,638,018 + PS417_21335 0.62 -0.8 4,638,377 + +0.8 4,638,428 + -1.5 4,638,437 + +0.0 4,638,642 - PS417_21340 0.26 -0.2 4,638,943 + PS417_21340 0.63 -1.3 4,638,944 - PS417_21340 0.63 -0.3 4,638,944 - PS417_21340 0.63 +0.1 4,638,944 - PS417_21340 0.63 +0.4 4,638,944 - PS417_21340 0.63 +0.2 4,638,944 - PS417_21340 0.63 -0.5 4,639,028 + PS417_21340 0.73 -0.2 4,639,029 - PS417_21340 0.73 -0.3 4,639,202 + -0.3 4,639,202 + +0.3 4,639,203 - -0.4 4,639,295 + -2.3 4,639,298 - +1.4 4,639,298 - +0.1 4,639,324 - +0.1 4,639,327 + +0.1 4,639,345 - -0.7 4,639,366 - +0.2
Or see this region's nucleotide sequence