Experiment: Carbon source L-Citrulline 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_21310 and PS417_21315 are separated by 182 nucleotides PS417_21315 and PS417_21320 are separated by 0 nucleotides PS417_21320 and PS417_21325 are separated by 180 nucleotides
PS417_21310: PS417_21310 - AraC family transcriptional regulator, at 4,631,822 to 4,632,715
_21310
PS417_21315: PS417_21315 - hydroxyacid dehydrogenase, at 4,632,898 to 4,633,950
_21315
PS417_21320: PS417_21320 - transcriptional regulator, at 4,633,951 to 4,634,754
_21320
PS417_21325: PS417_21325 - arabinose ABC transporter permease, at 4,634,935 to 4,635,900
_21325
Position (kb)
4632
4633
4634 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4631.986 kb on - strand, within PS417_21310 at 4632.007 kb on + strand, within PS417_21310 at 4632.007 kb on + strand at 4632.008 kb on - strand, within PS417_21310 at 4632.008 kb on - strand, within PS417_21310 at 4632.008 kb on - strand, within PS417_21310 at 4632.008 kb on - strand, within PS417_21310 at 4632.090 kb on + strand, within PS417_21310 at 4632.498 kb on + strand, within PS417_21310 at 4632.509 kb on - strand, within PS417_21310 at 4632.509 kb on - strand, within PS417_21310 at 4632.567 kb on + strand, within PS417_21310 at 4632.568 kb on - strand, within PS417_21310 at 4632.568 kb on - strand, within PS417_21310 at 4632.771 kb on + strand at 4632.772 kb on - strand at 4632.802 kb on + strand at 4632.902 kb on - strand at 4632.902 kb on - strand at 4633.216 kb on + strand, within PS417_21315 at 4633.243 kb on + strand, within PS417_21315 at 4633.243 kb on + strand, within PS417_21315 at 4633.244 kb on - strand, within PS417_21315 at 4633.391 kb on - strand, within PS417_21315 at 4633.464 kb on + strand, within PS417_21315 at 4633.660 kb on + strand, within PS417_21315 at 4633.912 kb on + strand at 4634.039 kb on + strand, within PS417_21320 at 4634.040 kb on - strand at 4634.166 kb on - strand, within PS417_21320 at 4634.166 kb on - strand, within PS417_21320 at 4634.540 kb on + strand, within PS417_21320 at 4634.610 kb on + strand, within PS417_21320 at 4634.799 kb on + strand at 4634.799 kb on + strand at 4634.800 kb on - strand at 4634.876 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source L-Citrulline 5 mM remove 4,631,986 - PS417_21310 0.18 +0.4 4,632,007 + PS417_21310 0.21 +0.7 4,632,007 + +3.4 4,632,008 - PS417_21310 0.21 -0.0 4,632,008 - PS417_21310 0.21 -0.8 4,632,008 - PS417_21310 0.21 -0.6 4,632,008 - PS417_21310 0.21 +0.1 4,632,090 + PS417_21310 0.30 -0.1 4,632,498 + PS417_21310 0.76 +3.1 4,632,509 - PS417_21310 0.77 -1.6 4,632,509 - PS417_21310 0.77 -0.0 4,632,567 + PS417_21310 0.83 -0.8 4,632,568 - PS417_21310 0.83 +0.5 4,632,568 - PS417_21310 0.83 -0.4 4,632,771 + -0.4 4,632,772 - +0.2 4,632,802 + -0.3 4,632,902 - +1.1 4,632,902 - -0.3 4,633,216 + PS417_21315 0.30 +0.5 4,633,243 + PS417_21315 0.33 -0.6 4,633,243 + PS417_21315 0.33 +1.0 4,633,244 - PS417_21315 0.33 +0.7 4,633,391 - PS417_21315 0.47 -0.2 4,633,464 + PS417_21315 0.54 -2.0 4,633,660 + PS417_21315 0.72 -0.8 4,633,912 + -1.0 4,634,039 + PS417_21320 0.11 -0.1 4,634,040 - +1.2 4,634,166 - PS417_21320 0.27 -1.1 4,634,166 - PS417_21320 0.27 -0.6 4,634,540 + PS417_21320 0.73 -0.6 4,634,610 + PS417_21320 0.82 -1.0 4,634,799 + -1.0 4,634,799 + -1.5 4,634,800 - -0.7 4,634,876 - -0.4
Or see this region's nucleotide sequence