Experiment: Carbon source L-Citrulline 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_17360 and PS417_17365 are separated by 3 nucleotides PS417_17365 and PS417_17370 are separated by 51 nucleotides
PS417_17360: PS417_17360 - D-galacturonate dehydrogenase (EC 1.1.1.203) (from data) , at 3,792,587 to 3,793,411
_17360
PS417_17365: PS417_17365 - galactaro-1,5-lactonase (from data) , at 3,793,415 to 3,794,290
_17365
PS417_17370: PS417_17370 - C4-dicarboxylate ABC transporter, at 3,794,342 to 3,795,304
_17370
Position (kb)
3793
3794
3795 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3792.460 kb on - strand at 3792.541 kb on - strand at 3792.893 kb on - strand, within PS417_17360 at 3792.896 kb on + strand, within PS417_17360 at 3792.896 kb on + strand, within PS417_17360 at 3792.896 kb on + strand, within PS417_17360 at 3792.897 kb on - strand, within PS417_17360 at 3792.897 kb on - strand, within PS417_17360 at 3792.966 kb on - strand, within PS417_17360 at 3792.966 kb on - strand at 3792.966 kb on - strand, within PS417_17360 at 3793.016 kb on + strand, within PS417_17360 at 3793.016 kb on + strand, within PS417_17360 at 3793.016 kb on + strand, within PS417_17360 at 3793.016 kb on + strand, within PS417_17360 at 3793.017 kb on - strand, within PS417_17360 at 3793.073 kb on + strand, within PS417_17360 at 3793.194 kb on - strand, within PS417_17360 at 3793.223 kb on + strand, within PS417_17360 at 3793.901 kb on + strand, within PS417_17365 at 3793.902 kb on - strand, within PS417_17365 at 3793.902 kb on - strand, within PS417_17365 at 3793.902 kb on - strand, within PS417_17365 at 3794.127 kb on + strand, within PS417_17365 at 3794.127 kb on + strand, within PS417_17365 at 3794.288 kb on + strand at 3794.312 kb on - strand at 3794.320 kb on - strand at 3794.787 kb on - strand, within PS417_17370 at 3794.842 kb on - strand, within PS417_17370 at 3795.005 kb on + strand, within PS417_17370 at 3795.006 kb on - strand, within PS417_17370 at 3795.008 kb on + strand, within PS417_17370 at 3795.009 kb on - strand, within PS417_17370 at 3795.224 kb on + strand at 3795.224 kb on + strand at 3795.224 kb on + strand at 3795.225 kb on - strand at 3795.225 kb on - strand at 3795.225 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source L-Citrulline 5 mM remove 3,792,460 - +0.3 3,792,541 - -0.4 3,792,893 - PS417_17360 0.37 -0.1 3,792,896 + PS417_17360 0.37 -1.1 3,792,896 + PS417_17360 0.37 -0.8 3,792,896 + PS417_17360 0.37 +0.2 3,792,897 - PS417_17360 0.38 +1.3 3,792,897 - PS417_17360 0.38 -1.6 3,792,966 - PS417_17360 0.46 +0.3 3,792,966 - +0.3 3,792,966 - PS417_17360 0.46 +0.7 3,793,016 + PS417_17360 0.52 +0.2 3,793,016 + PS417_17360 0.52 +1.9 3,793,016 + PS417_17360 0.52 +0.2 3,793,016 + PS417_17360 0.52 -1.5 3,793,017 - PS417_17360 0.52 -1.7 3,793,073 + PS417_17360 0.59 -0.1 3,793,194 - PS417_17360 0.74 -0.3 3,793,223 + PS417_17360 0.77 -0.2 3,793,901 + PS417_17365 0.55 -0.0 3,793,902 - PS417_17365 0.56 -1.3 3,793,902 - PS417_17365 0.56 -1.0 3,793,902 - PS417_17365 0.56 +0.5 3,794,127 + PS417_17365 0.81 -0.2 3,794,127 + PS417_17365 0.81 -2.3 3,794,288 + -1.4 3,794,312 - +1.3 3,794,320 - -0.4 3,794,787 - PS417_17370 0.46 -0.4 3,794,842 - PS417_17370 0.52 +0.2 3,795,005 + PS417_17370 0.69 +1.0 3,795,006 - PS417_17370 0.69 +0.3 3,795,008 + PS417_17370 0.69 -0.8 3,795,009 - PS417_17370 0.69 -0.3 3,795,224 + -0.3 3,795,224 + +0.3 3,795,224 + +0.7 3,795,225 - -0.9 3,795,225 - -0.7 3,795,225 - -0.1
Or see this region's nucleotide sequence