Experiment: Carbon source L-Citrulline 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_13050 and PS417_13055 overlap by 4 nucleotides PS417_13055 and PS417_13060 are separated by 104 nucleotides PS417_13060 and PS417_13065 are separated by 218 nucleotides
PS417_13050: PS417_13050 - N-acetylglucosamine-6-sulfatase, at 2,852,644 to 2,853,162
_13050
PS417_13055: PS417_13055 - aminotransferase, at 2,853,159 to 2,853,722
_13055
PS417_13060: PS417_13060 - chemotaxis protein, at 2,853,827 to 2,855,461
_13060
PS417_13065: PS417_13065 - UDP pyrophosphate phosphatase, at 2,855,680 to 2,856,510
_13065
Position (kb)
2853
2854
2855
2856 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2852.938 kb on - strand, within PS417_13050 at 2853.027 kb on + strand, within PS417_13050 at 2853.056 kb on + strand, within PS417_13050 at 2853.124 kb on - strand at 2853.124 kb on - strand at 2853.259 kb on + strand, within PS417_13055 at 2853.539 kb on - strand, within PS417_13055 at 2853.614 kb on - strand, within PS417_13055 at 2854.322 kb on + strand, within PS417_13060 at 2854.525 kb on - strand, within PS417_13060 at 2854.525 kb on - strand at 2854.819 kb on + strand, within PS417_13060 at 2854.925 kb on + strand, within PS417_13060 at 2854.925 kb on + strand, within PS417_13060 at 2854.930 kb on - strand, within PS417_13060 at 2854.930 kb on - strand, within PS417_13060 at 2854.978 kb on - strand, within PS417_13060 at 2854.978 kb on - strand, within PS417_13060 at 2854.978 kb on - strand, within PS417_13060 at 2854.978 kb on - strand, within PS417_13060 at 2855.184 kb on + strand, within PS417_13060 at 2855.184 kb on + strand, within PS417_13060 at 2855.281 kb on - strand, within PS417_13060 at 2855.377 kb on + strand at 2855.443 kb on + strand at 2855.443 kb on + strand at 2855.444 kb on - strand at 2855.556 kb on + strand at 2855.557 kb on - strand at 2855.657 kb on - strand at 2855.928 kb on + strand, within PS417_13065 at 2856.001 kb on + strand, within PS417_13065 at 2856.002 kb on - strand, within PS417_13065 at 2856.284 kb on - strand, within PS417_13065 at 2856.415 kb on + strand, within PS417_13065 at 2856.416 kb on - strand, within PS417_13065 at 2856.416 kb on - strand at 2856.452 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source L-Citrulline 5 mM remove 2,852,938 - PS417_13050 0.57 +0.7 2,853,027 + PS417_13050 0.74 +0.7 2,853,056 + PS417_13050 0.79 -1.5 2,853,124 - -2.0 2,853,124 - -0.4 2,853,259 + PS417_13055 0.18 -0.6 2,853,539 - PS417_13055 0.67 +2.2 2,853,614 - PS417_13055 0.81 -0.4 2,854,322 + PS417_13060 0.30 -1.6 2,854,525 - PS417_13060 0.43 -0.6 2,854,525 - +1.2 2,854,819 + PS417_13060 0.61 +1.0 2,854,925 + PS417_13060 0.67 -0.3 2,854,925 + PS417_13060 0.67 -0.4 2,854,930 - PS417_13060 0.67 -1.8 2,854,930 - PS417_13060 0.67 +0.9 2,854,978 - PS417_13060 0.70 -1.4 2,854,978 - PS417_13060 0.70 -0.9 2,854,978 - PS417_13060 0.70 +0.1 2,854,978 - PS417_13060 0.70 -0.2 2,855,184 + PS417_13060 0.83 -0.5 2,855,184 + PS417_13060 0.83 -0.8 2,855,281 - PS417_13060 0.89 -0.4 2,855,377 + +0.1 2,855,443 + -0.7 2,855,443 + +0.2 2,855,444 - -0.0 2,855,556 + -0.9 2,855,557 - +0.3 2,855,657 - -1.3 2,855,928 + PS417_13065 0.30 -0.4 2,856,001 + PS417_13065 0.39 +1.3 2,856,002 - PS417_13065 0.39 -2.0 2,856,284 - PS417_13065 0.73 -0.8 2,856,415 + PS417_13065 0.88 +0.0 2,856,416 - PS417_13065 0.89 -0.2 2,856,416 - -1.8 2,856,452 + -0.2
Or see this region's nucleotide sequence