Experiment: Carbon source L-Citrulline 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_11565 and PS417_11570 are separated by 4 nucleotides PS417_11570 and PS417_11575 overlap by 4 nucleotides PS417_11575 and PS417_11580 are separated by 242 nucleotides
PS417_11565: PS417_11565 - ABC transporter permease, at 2,485,868 to 2,486,662
_11565
PS417_11570: PS417_11570 - ABC transporter permease, at 2,486,667 to 2,487,512
_11570
PS417_11575: PS417_11575 - spermidine/putrescine ABC transporter ATPase, at 2,487,509 to 2,488,537
_11575
PS417_11580: PS417_11580 - IclR family transcriptional regulator, at 2,488,780 to 2,489,610
_11580
Position (kb)
2487
2488
2489 Strain fitness (log2 ratio)
-2
-1
0
1 at 2486.669 kb on - strand at 2486.794 kb on + strand, within PS417_11570 at 2486.803 kb on + strand, within PS417_11570 at 2486.804 kb on - strand, within PS417_11570 at 2486.804 kb on - strand, within PS417_11570 at 2487.257 kb on - strand, within PS417_11570 at 2487.335 kb on - strand, within PS417_11570 at 2487.364 kb on + strand, within PS417_11570 at 2487.542 kb on + strand at 2487.675 kb on + strand, within PS417_11575 at 2487.782 kb on + strand, within PS417_11575 at 2487.783 kb on - strand at 2487.783 kb on - strand, within PS417_11575 at 2488.373 kb on + strand at 2488.373 kb on + strand, within PS417_11575 at 2488.373 kb on + strand, within PS417_11575 at 2488.501 kb on - strand at 2488.680 kb on + strand at 2488.732 kb on - strand at 2488.761 kb on - strand at 2489.323 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source L-Citrulline 5 mM remove 2,486,669 - +1.1 2,486,794 + PS417_11570 0.15 -0.7 2,486,803 + PS417_11570 0.16 +1.4 2,486,804 - PS417_11570 0.16 +0.1 2,486,804 - PS417_11570 0.16 -1.1 2,487,257 - PS417_11570 0.70 -1.3 2,487,335 - PS417_11570 0.79 +0.3 2,487,364 + PS417_11570 0.82 +0.3 2,487,542 + +0.6 2,487,675 + PS417_11575 0.16 -0.7 2,487,782 + PS417_11575 0.27 +0.1 2,487,783 - -0.5 2,487,783 - PS417_11575 0.27 -0.2 2,488,373 + +1.3 2,488,373 + PS417_11575 0.84 -0.3 2,488,373 + PS417_11575 0.84 -0.1 2,488,501 - +0.8 2,488,680 + -1.9 2,488,732 - -0.4 2,488,761 - -1.4 2,489,323 + +1.3
Or see this region's nucleotide sequence