Experiment: Carbon source L-Citrulline 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_07395 and PS417_07400 are separated by 154 nucleotides PS417_07400 and PS417_07405 are separated by 12 nucleotides PS417_07405 and PS417_07410 are separated by 43 nucleotides PS417_07410 and PS417_07415 are separated by 68 nucleotides
PS417_07395: PS417_07395 - NADH dehydrogenase, at 1,630,926 to 1,631,510
_07395
PS417_07400: PS417_07400 - hypothetical protein, at 1,631,665 to 1,632,114
_07400
PS417_07405: PS417_07405 - hypothetical protein, at 1,632,127 to 1,633,347
_07405
PS417_07410: PS417_07410 - hypothetical protein, at 1,633,391 to 1,633,741
_07410
PS417_07415: PS417_07415 - 23S rRNA methyltransferase, at 1,633,810 to 1,634,277
_07415
Position (kb)
1632
1633
1634 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1631.348 kb on - strand at 1631.562 kb on - strand at 1631.800 kb on + strand, within PS417_07400 at 1631.800 kb on + strand, within PS417_07400 at 1631.800 kb on + strand, within PS417_07400 at 1631.803 kb on + strand, within PS417_07400 at 1632.091 kb on + strand at 1632.091 kb on + strand at 1632.092 kb on - strand at 1632.126 kb on + strand at 1632.126 kb on + strand at 1632.126 kb on + strand at 1632.127 kb on - strand at 1632.156 kb on + strand at 1632.156 kb on + strand at 1632.156 kb on + strand at 1632.156 kb on + strand at 1632.157 kb on - strand at 1632.157 kb on - strand at 1632.157 kb on - strand at 1632.157 kb on - strand at 1632.157 kb on - strand at 1632.157 kb on - strand at 1632.157 kb on - strand at 1632.157 kb on - strand at 1632.157 kb on - strand at 1632.157 kb on - strand at 1632.214 kb on + strand at 1632.215 kb on - strand at 1632.448 kb on + strand, within PS417_07405 at 1632.448 kb on + strand, within PS417_07405 at 1632.449 kb on - strand, within PS417_07405 at 1632.449 kb on - strand, within PS417_07405 at 1632.449 kb on - strand, within PS417_07405 at 1632.944 kb on + strand, within PS417_07405 at 1632.956 kb on + strand, within PS417_07405 at 1633.021 kb on + strand, within PS417_07405 at 1633.022 kb on - strand, within PS417_07405 at 1633.082 kb on + strand, within PS417_07405 at 1633.212 kb on + strand, within PS417_07405 at 1633.212 kb on + strand, within PS417_07405 at 1633.213 kb on - strand, within PS417_07405 at 1633.406 kb on - strand at 1633.452 kb on - strand, within PS417_07410 at 1633.452 kb on - strand, within PS417_07410 at 1633.452 kb on - strand, within PS417_07410 at 1633.543 kb on + strand, within PS417_07410 at 1633.714 kb on + strand at 1633.715 kb on - strand at 1633.763 kb on - strand at 1633.772 kb on + strand at 1633.773 kb on - strand at 1633.773 kb on - strand at 1633.814 kb on + strand at 1633.859 kb on + strand, within PS417_07415 at 1633.860 kb on - strand, within PS417_07415 at 1633.860 kb on - strand, within PS417_07415 at 1633.860 kb on - strand at 1633.913 kb on + strand, within PS417_07415 at 1633.913 kb on + strand, within PS417_07415 at 1633.914 kb on - strand, within PS417_07415 at 1633.979 kb on + strand, within PS417_07415 at 1633.979 kb on + strand, within PS417_07415 at 1634.003 kb on + strand, within PS417_07415 at 1634.168 kb on + strand, within PS417_07415 at 1634.241 kb on + strand at 1634.243 kb on + strand at 1634.244 kb on - strand at 1634.244 kb on - strand at 1634.244 kb on - strand at 1634.244 kb on - strand at 1634.244 kb on - strand at 1634.244 kb on - strand at 1634.309 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source L-Citrulline 5 mM remove 1,631,348 - -1.5 1,631,562 - -0.7 1,631,800 + PS417_07400 0.30 +0.1 1,631,800 + PS417_07400 0.30 -0.8 1,631,800 + PS417_07400 0.30 -0.1 1,631,803 + PS417_07400 0.31 -1.1 1,632,091 + +0.4 1,632,091 + +0.9 1,632,092 - -0.4 1,632,126 + -0.3 1,632,126 + -1.6 1,632,126 + -0.4 1,632,127 - +0.5 1,632,156 + -0.0 1,632,156 + -0.7 1,632,156 + +3.1 1,632,156 + -0.6 1,632,157 - -0.0 1,632,157 - -0.5 1,632,157 - -0.4 1,632,157 - +0.3 1,632,157 - +0.0 1,632,157 - -1.1 1,632,157 - -0.1 1,632,157 - +1.3 1,632,157 - +1.2 1,632,157 - -0.8 1,632,214 + +0.0 1,632,215 - -0.5 1,632,448 + PS417_07405 0.26 -1.5 1,632,448 + PS417_07405 0.26 +0.3 1,632,449 - PS417_07405 0.26 -1.6 1,632,449 - PS417_07405 0.26 -1.2 1,632,449 - PS417_07405 0.26 -1.0 1,632,944 + PS417_07405 0.67 -0.2 1,632,956 + PS417_07405 0.68 -0.5 1,633,021 + PS417_07405 0.73 +0.1 1,633,022 - PS417_07405 0.73 -0.4 1,633,082 + PS417_07405 0.78 -0.2 1,633,212 + PS417_07405 0.89 -0.4 1,633,212 + PS417_07405 0.89 -1.3 1,633,213 - PS417_07405 0.89 -0.6 1,633,406 - +0.0 1,633,452 - PS417_07410 0.17 +0.7 1,633,452 - PS417_07410 0.17 +0.5 1,633,452 - PS417_07410 0.17 -0.7 1,633,543 + PS417_07410 0.43 +0.3 1,633,714 + -0.2 1,633,715 - -0.7 1,633,763 - -0.4 1,633,772 + -1.0 1,633,773 - -0.5 1,633,773 - +0.4 1,633,814 + +2.1 1,633,859 + PS417_07415 0.10 +1.4 1,633,860 - PS417_07415 0.11 +0.1 1,633,860 - PS417_07415 0.11 +0.2 1,633,860 - +0.5 1,633,913 + PS417_07415 0.22 -0.5 1,633,913 + PS417_07415 0.22 +0.1 1,633,914 - PS417_07415 0.22 -0.2 1,633,979 + PS417_07415 0.36 -0.7 1,633,979 + PS417_07415 0.36 +0.3 1,634,003 + PS417_07415 0.41 +0.2 1,634,168 + PS417_07415 0.76 -0.9 1,634,241 + -1.3 1,634,243 + -0.6 1,634,244 - +1.3 1,634,244 - +0.1 1,634,244 - -0.3 1,634,244 - +0.6 1,634,244 - -0.3 1,634,244 - +1.2 1,634,309 + -0.9
Or see this region's nucleotide sequence