Experiment: Carbon source L-Ornithine 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_21695 and PS417_21700 overlap by 1 nucleotides PS417_21700 and PS417_21705 are separated by 51 nucleotides
PS417_21695: PS417_21695 - succinylglutamate-semialdehyde dehydrogenase, at 4,705,710 to 4,707,176
_21695
PS417_21700: PS417_21700 - arginine N-succinyltransferase, at 4,707,176 to 4,708,201
_21700
PS417_21705: PS417_21705 - arginine N-succinyltransferase, at 4,708,253 to 4,709,272
_21705
Position (kb)
4707
4708
4709 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4706.364 kb on - strand, within PS417_21695 at 4706.387 kb on - strand, within PS417_21695 at 4706.595 kb on + strand, within PS417_21695 at 4706.840 kb on - strand, within PS417_21695 at 4707.163 kb on + strand at 4707.164 kb on - strand at 4707.164 kb on - strand at 4707.463 kb on - strand, within PS417_21700 at 4707.631 kb on - strand, within PS417_21700 at 4707.901 kb on + strand, within PS417_21700 at 4707.901 kb on + strand, within PS417_21700 at 4707.902 kb on - strand, within PS417_21700 at 4707.948 kb on + strand, within PS417_21700 at 4708.205 kb on - strand at 4708.345 kb on - strand at 4708.524 kb on + strand, within PS417_21705 at 4708.525 kb on - strand, within PS417_21705 at 4708.633 kb on - strand, within PS417_21705 at 4708.633 kb on - strand, within PS417_21705 at 4708.633 kb on - strand, within PS417_21705 at 4708.633 kb on - strand, within PS417_21705 at 4708.633 kb on - strand, within PS417_21705 at 4708.708 kb on - strand, within PS417_21705 at 4709.010 kb on + strand, within PS417_21705 at 4709.011 kb on - strand, within PS417_21705
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source L-Ornithine 5 mM remove 4,706,364 - PS417_21695 0.45 -1.3 4,706,387 - PS417_21695 0.46 -1.3 4,706,595 + PS417_21695 0.60 -0.9 4,706,840 - PS417_21695 0.77 -0.7 4,707,163 + -1.1 4,707,164 - -0.5 4,707,164 - -0.9 4,707,463 - PS417_21700 0.28 -2.3 4,707,631 - PS417_21700 0.44 -1.6 4,707,901 + PS417_21700 0.71 +0.0 4,707,901 + PS417_21700 0.71 -0.7 4,707,902 - PS417_21700 0.71 -1.4 4,707,948 + PS417_21700 0.75 -0.1 4,708,205 - -0.6 4,708,345 - +0.1 4,708,524 + PS417_21705 0.27 -1.8 4,708,525 - PS417_21705 0.27 -1.4 4,708,633 - PS417_21705 0.37 +1.2 4,708,633 - PS417_21705 0.37 +0.2 4,708,633 - PS417_21705 0.37 +0.8 4,708,633 - PS417_21705 0.37 +2.5 4,708,633 - PS417_21705 0.37 +2.5 4,708,708 - PS417_21705 0.45 +0.5 4,709,010 + PS417_21705 0.74 +1.5 4,709,011 - PS417_21705 0.74 +0.5
Or see this region's nucleotide sequence