Strain Fitness in Pseudomonas simiae WCS417 around PS417_20725
Experiment: Carbon source L-Ornithine 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbon source L-Ornithine 5 mM |
---|---|---|---|---|---|
remove | |||||
4,504,233 | + | PS417_20720 | 0.33 | -0.5 | |
4,504,234 | - | PS417_20720 | 0.33 | -0.2 | |
4,504,512 | + | PS417_20720 | 0.52 | +0.3 | |
4,504,711 | - | PS417_20720 | 0.66 | +0.6 | |
4,504,848 | + | -0.7 | |||
4,504,944 | + | PS417_20720 | 0.82 | -0.8 | |
4,504,945 | - | PS417_20720 | 0.82 | +0.1 | |
4,505,061 | + | +0.5 | |||
4,505,118 | + | -1.5 | |||
4,505,119 | - | -0.3 | |||
4,505,376 | - | PS417_20725 | 0.29 | -1.1 | |
4,505,573 | + | PS417_20725 | 0.61 | -0.0 | |
4,505,983 | + | +0.7 | |||
4,506,020 | - | -1.0 | |||
4,506,146 | - | PS417_20735 | 0.15 | -0.7 |
Or see this region's nucleotide sequence