Strain Fitness in Pseudomonas simiae WCS417 around PS417_19335
Experiment: Carbon source L-Ornithine 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbon source L-Ornithine 5 mM |
---|---|---|---|---|---|
remove | |||||
4,192,717 | - | PS417_19330 | 0.72 | -1.2 | |
4,193,008 | + | -0.1 | |||
4,193,036 | - | -0.7 | |||
4,193,036 | - | -0.1 | |||
4,193,036 | - | -0.0 | |||
4,193,036 | - | +0.1 | |||
4,193,132 | + | +0.3 | |||
4,193,132 | + | -0.8 | |||
4,193,132 | + | -0.6 | |||
4,193,133 | - | -0.2 | |||
4,193,312 | - | PS417_19335 | 0.17 | -1.0 | |
4,193,423 | + | PS417_19335 | 0.36 | -1.3 | |
4,193,423 | + | PS417_19335 | 0.36 | -0.9 | |
4,193,877 | - | -2.3 | |||
4,193,903 | - | -1.2 | |||
4,193,903 | - | -1.5 | |||
4,194,045 | + | PS417_19340 | 0.31 | +0.9 | |
4,194,181 | - | PS417_19340 | 0.74 | +1.6 | |
4,194,312 | + | -0.1 | |||
4,194,313 | - | -0.6 | |||
4,194,313 | - | +0.9 |
Or see this region's nucleotide sequence