Experiment: Carbon source L-Ornithine 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_18630 and PS417_18635 are separated by 55 nucleotides PS417_18635 and PS417_18640 are separated by 39 nucleotides PS417_18640 and PS417_18645 are separated by 15 nucleotides
PS417_18630: PS417_18630 - tRNA-dihydrouridine synthase C, at 4,050,136 to 4,051,113
_18630
PS417_18635: PS417_18635 - 4-hydroxybenzoyl-CoA thioesterase, at 4,051,169 to 4,051,603
_18635
PS417_18640: PS417_18640 - hydrolase, at 4,051,643 to 4,052,476
_18640
PS417_18645: PS417_18645 - TetR family transcriptional regulator, at 4,052,492 to 4,053,031
_18645
Position (kb) 4051
4052 Strain fitness (log2 ratio) -1
0
1 at 4050.511 kb on - strand, within PS417_18630 at 4050.621 kb on + strand, within PS417_18630 at 4050.981 kb on - strand, within PS417_18630 at 4051.302 kb on - strand, within PS417_18635 at 4051.512 kb on + strand, within PS417_18635 at 4051.512 kb on + strand, within PS417_18635 at 4051.512 kb on + strand, within PS417_18635 at 4051.513 kb on - strand, within PS417_18635 at 4051.623 kb on - strand at 4051.623 kb on - strand at 4051.642 kb on - strand at 4051.664 kb on + strand at 4051.946 kb on + strand, within PS417_18640 at 4051.947 kb on - strand, within PS417_18640 at 4051.947 kb on - strand, within PS417_18640 at 4051.947 kb on - strand, within PS417_18640 at 4052.270 kb on + strand, within PS417_18640 at 4052.271 kb on - strand, within PS417_18640 at 4052.493 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source L-Ornithine 10 mM remove 4,050,511 - PS417_18630 0.38 -0.4 4,050,621 + PS417_18630 0.50 +0.6 4,050,981 - PS417_18630 0.86 +0.5 4,051,302 - PS417_18635 0.31 -0.5 4,051,512 + PS417_18635 0.79 -0.3 4,051,512 + PS417_18635 0.79 -1.1 4,051,512 + PS417_18635 0.79 -0.8 4,051,513 - PS417_18635 0.79 -1.5 4,051,623 - -0.4 4,051,623 - -0.1 4,051,642 - -0.5 4,051,664 + -0.5 4,051,946 + PS417_18640 0.36 -0.0 4,051,947 - PS417_18640 0.36 +0.0 4,051,947 - PS417_18640 0.36 +0.2 4,051,947 - PS417_18640 0.36 +0.6 4,052,270 + PS417_18640 0.75 -1.1 4,052,271 - PS417_18640 0.75 -0.9 4,052,493 + -0.1
Or see this region's nucleotide sequence