Experiment: Carbon source D-Mannitol 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_17120 and PS417_17125 are separated by 116 nucleotides PS417_17125 and PS417_17130 are separated by 109 nucleotides
PS417_17120: PS417_17120 - protein kinase, at 3,738,271 to 3,739,563
_17120
PS417_17125: PS417_17125 - transcriptional regulator, at 3,739,680 to 3,740,387
_17125
PS417_17130: PS417_17130 - MFS transporter, at 3,740,497 to 3,741,822
_17130
Position (kb)
3739
3740
3741 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 3738.809 kb on - strand, within PS417_17120 at 3738.976 kb on + strand, within PS417_17120 at 3738.976 kb on + strand, within PS417_17120 at 3739.183 kb on + strand, within PS417_17120 at 3739.184 kb on - strand, within PS417_17120 at 3739.184 kb on - strand, within PS417_17120 at 3739.291 kb on + strand, within PS417_17120 at 3739.302 kb on + strand, within PS417_17120 at 3739.681 kb on + strand at 3739.801 kb on + strand, within PS417_17125 at 3739.801 kb on + strand, within PS417_17125 at 3739.802 kb on - strand, within PS417_17125 at 3740.075 kb on + strand, within PS417_17125 at 3740.140 kb on + strand, within PS417_17125 at 3740.360 kb on + strand at 3740.452 kb on - strand at 3740.470 kb on - strand at 3740.654 kb on + strand, within PS417_17130 at 3741.035 kb on + strand, within PS417_17130 at 3741.036 kb on - strand, within PS417_17130 at 3741.252 kb on + strand, within PS417_17130 at 3741.297 kb on + strand, within PS417_17130 at 3741.329 kb on + strand, within PS417_17130 at 3741.329 kb on + strand at 3741.330 kb on - strand, within PS417_17130 at 3741.378 kb on - strand, within PS417_17130 at 3741.378 kb on - strand, within PS417_17130
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source D-Mannitol 5 mM remove 3,738,809 - PS417_17120 0.42 -0.4 3,738,976 + PS417_17120 0.55 +0.6 3,738,976 + PS417_17120 0.55 +0.6 3,739,183 + PS417_17120 0.71 -0.5 3,739,184 - PS417_17120 0.71 +2.0 3,739,184 - PS417_17120 0.71 +0.6 3,739,291 + PS417_17120 0.79 -0.1 3,739,302 + PS417_17120 0.80 -0.1 3,739,681 + +0.2 3,739,801 + PS417_17125 0.17 -1.0 3,739,801 + PS417_17125 0.17 +0.0 3,739,802 - PS417_17125 0.17 +0.5 3,740,075 + PS417_17125 0.56 -4.4 3,740,140 + PS417_17125 0.65 -0.9 3,740,360 + +1.4 3,740,452 - +0.3 3,740,470 - -1.8 3,740,654 + PS417_17130 0.12 +0.0 3,741,035 + PS417_17130 0.41 -0.2 3,741,036 - PS417_17130 0.41 -0.2 3,741,252 + PS417_17130 0.57 -0.4 3,741,297 + PS417_17130 0.60 +0.2 3,741,329 + PS417_17130 0.63 -1.0 3,741,329 + -0.5 3,741,330 - PS417_17130 0.63 -0.7 3,741,378 - PS417_17130 0.66 +0.1 3,741,378 - PS417_17130 0.66 +0.1
Or see this region's nucleotide sequence