Experiment: Carbon source D-Mannitol 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_25770 and PS417_25775 are separated by 77 nucleotides PS417_25775 and PS417_25780 are separated by 71 nucleotides PS417_25780 and PS417_25785 are separated by 1 nucleotides
PS417_25770: PS417_25770 - ABC transporter substrate-binding protein, at 5,563,031 to 5,565,025
_25770
PS417_25775: PS417_25775 - lipoprotein, at 5,565,103 to 5,566,077
_25775
PS417_25780: PS417_25780 - molecular chaperone DnaJ, at 5,566,149 to 5,566,916
_25780
PS417_25785: PS417_25785 - mannose-1-phosphate guanylyltransferase, at 5,566,918 to 5,567,592
_25785
Position (kb) 5565
5566
5567 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5564.229 kb on + strand, within PS417_25770 at 5564.465 kb on + strand, within PS417_25770 at 5564.466 kb on - strand, within PS417_25770 at 5564.517 kb on + strand, within PS417_25770 at 5564.532 kb on + strand, within PS417_25770 at 5564.647 kb on + strand, within PS417_25770 at 5564.647 kb on + strand, within PS417_25770 at 5564.647 kb on + strand, within PS417_25770 at 5564.648 kb on - strand, within PS417_25770 at 5564.649 kb on + strand, within PS417_25770 at 5564.649 kb on + strand, within PS417_25770 at 5564.649 kb on + strand, within PS417_25770 at 5564.650 kb on - strand, within PS417_25770 at 5564.650 kb on - strand, within PS417_25770 at 5564.650 kb on - strand, within PS417_25770 at 5564.650 kb on - strand, within PS417_25770 at 5564.650 kb on - strand, within PS417_25770 at 5564.873 kb on + strand at 5565.067 kb on + strand at 5565.372 kb on + strand, within PS417_25775 at 5565.377 kb on + strand, within PS417_25775 at 5565.417 kb on + strand, within PS417_25775 at 5565.418 kb on - strand, within PS417_25775 at 5565.492 kb on + strand at 5565.493 kb on - strand, within PS417_25775 at 5565.509 kb on + strand, within PS417_25775 at 5565.509 kb on + strand, within PS417_25775 at 5565.726 kb on - strand at 5565.849 kb on - strand, within PS417_25775 at 5565.849 kb on - strand, within PS417_25775 at 5565.849 kb on - strand, within PS417_25775 at 5565.895 kb on + strand, within PS417_25775 at 5565.896 kb on - strand, within PS417_25775 at 5565.971 kb on - strand, within PS417_25775 at 5566.031 kb on - strand at 5566.127 kb on + strand at 5566.183 kb on + strand at 5566.184 kb on - strand at 5566.205 kb on + strand at 5566.357 kb on + strand, within PS417_25780 at 5566.362 kb on - strand, within PS417_25780 at 5566.527 kb on + strand, within PS417_25780 at 5566.566 kb on + strand, within PS417_25780 at 5566.567 kb on - strand, within PS417_25780 at 5566.570 kb on + strand, within PS417_25780
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source D-Mannitol 10 mM remove 5,564,229 + PS417_25770 0.60 -1.7 5,564,465 + PS417_25770 0.72 -0.6 5,564,466 - PS417_25770 0.72 -0.3 5,564,517 + PS417_25770 0.74 -1.1 5,564,532 + PS417_25770 0.75 -0.3 5,564,647 + PS417_25770 0.81 +0.4 5,564,647 + PS417_25770 0.81 -0.5 5,564,647 + PS417_25770 0.81 -0.2 5,564,648 - PS417_25770 0.81 -1.3 5,564,649 + PS417_25770 0.81 +0.4 5,564,649 + PS417_25770 0.81 -0.2 5,564,649 + PS417_25770 0.81 +0.1 5,564,650 - PS417_25770 0.81 +0.4 5,564,650 - PS417_25770 0.81 -0.2 5,564,650 - PS417_25770 0.81 -0.1 5,564,650 - PS417_25770 0.81 -0.7 5,564,650 - PS417_25770 0.81 +0.2 5,564,873 + -1.3 5,565,067 + -2.2 5,565,372 + PS417_25775 0.28 +1.2 5,565,377 + PS417_25775 0.28 +2.4 5,565,417 + PS417_25775 0.32 +0.8 5,565,418 - PS417_25775 0.32 -0.3 5,565,492 + -1.1 5,565,493 - PS417_25775 0.40 -0.3 5,565,509 + PS417_25775 0.42 -0.2 5,565,509 + PS417_25775 0.42 +0.4 5,565,726 - +1.7 5,565,849 - PS417_25775 0.77 +0.7 5,565,849 - PS417_25775 0.77 +0.6 5,565,849 - PS417_25775 0.77 +0.7 5,565,895 + PS417_25775 0.81 -0.0 5,565,896 - PS417_25775 0.81 +0.2 5,565,971 - PS417_25775 0.89 +1.5 5,566,031 - -0.4 5,566,127 + +1.2 5,566,183 + +0.5 5,566,184 - -0.5 5,566,205 + -1.1 5,566,357 + PS417_25780 0.27 +0.2 5,566,362 - PS417_25780 0.28 +0.1 5,566,527 + PS417_25780 0.49 +0.7 5,566,566 + PS417_25780 0.54 -0.8 5,566,567 - PS417_25780 0.54 -0.1 5,566,570 + PS417_25780 0.55 -1.2
Or see this region's nucleotide sequence