Experiment: Carbon source D-Mannitol 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_15055 and PS417_15060 are separated by 172 nucleotides PS417_15060 and PS417_15065 are separated by 17 nucleotides PS417_15065 and PS417_15070 are separated by 120 nucleotides PS417_15070 and PS417_15075 are separated by 54 nucleotides
PS417_15055: PS417_15055 - C4-dicarboxylate ABC transporter, at 3,289,749 to 3,291,059
_15055
PS417_15060: PS417_15060 - GntR family transcriptional regulator, at 3,291,232 to 3,291,933
_15060
PS417_15065: PS417_15065 - GntR family transcriptional regulator, at 3,291,951 to 3,292,643
_15065
PS417_15070: PS417_15070 - hypothetical protein, at 3,292,764 to 3,293,384
_15070
PS417_15075: PS417_15075 - NAD-glutamate dehydrogenase, at 3,293,439 to 3,298,307
_15075
Position (kb)
3291
3292
3293 Strain fitness (log2 ratio)
-2
-1
0
1 at 3291.009 kb on + strand at 3291.010 kb on - strand at 3291.973 kb on - strand at 3292.035 kb on + strand at 3292.350 kb on + strand, within PS417_15065 at 3292.512 kb on + strand, within PS417_15065 at 3292.668 kb on - strand at 3292.757 kb on + strand at 3292.758 kb on - strand at 3292.821 kb on + strand at 3292.821 kb on + strand at 3292.821 kb on + strand at 3292.821 kb on + strand at 3292.821 kb on + strand at 3292.821 kb on + strand at 3292.822 kb on - strand at 3292.825 kb on + strand at 3292.825 kb on + strand at 3292.857 kb on + strand, within PS417_15070 at 3292.858 kb on - strand, within PS417_15070 at 3292.858 kb on - strand, within PS417_15070 at 3292.858 kb on - strand, within PS417_15070 at 3292.858 kb on - strand, within PS417_15070 at 3293.185 kb on + strand, within PS417_15070 at 3293.227 kb on - strand, within PS417_15070 at 3293.261 kb on - strand, within PS417_15070 at 3293.318 kb on - strand, within PS417_15070 at 3293.318 kb on - strand, within PS417_15070 at 3293.318 kb on - strand, within PS417_15070 at 3293.318 kb on - strand, within PS417_15070 at 3293.413 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source D-Mannitol 10 mM remove 3,291,009 + -0.1 3,291,010 - +0.4 3,291,973 - +1.1 3,292,035 + +0.1 3,292,350 + PS417_15065 0.58 +0.6 3,292,512 + PS417_15065 0.81 +0.5 3,292,668 - -0.6 3,292,757 + +0.6 3,292,758 - +0.2 3,292,821 + -0.2 3,292,821 + +0.1 3,292,821 + +0.0 3,292,821 + +0.1 3,292,821 + -0.3 3,292,821 + +0.9 3,292,822 - +0.5 3,292,825 + +0.6 3,292,825 + +0.5 3,292,857 + PS417_15070 0.15 +1.1 3,292,858 - PS417_15070 0.15 +0.1 3,292,858 - PS417_15070 0.15 +0.1 3,292,858 - PS417_15070 0.15 -2.2 3,292,858 - PS417_15070 0.15 +0.2 3,293,185 + PS417_15070 0.68 -0.6 3,293,227 - PS417_15070 0.75 -0.0 3,293,261 - PS417_15070 0.80 +0.1 3,293,318 - PS417_15070 0.89 +0.0 3,293,318 - PS417_15070 0.89 +1.5 3,293,318 - PS417_15070 0.89 -0.4 3,293,318 - PS417_15070 0.89 +0.1 3,293,413 - -1.2
Or see this region's nucleotide sequence