Experiment: Carbon source D-Mannitol 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_11795 and PS417_11800 are separated by 27 nucleotides PS417_11800 and PS417_11805 are separated by 113 nucleotides
PS417_11795: PS417_11795 - FAD-dependent oxidoreductase, at 2,566,989 to 2,568,281
_11795
PS417_11800: PS417_11800 - LysR family transcriptional regulator, at 2,568,309 to 2,569,202
_11800
PS417_11805: PS417_11805 - D-threo-aldose 1-dehydrogenase, at 2,569,316 to 2,570,320
_11805
Position (kb)
2568
2569
2570 Strain fitness (log2 ratio)
-1
0
1
2 at 2567.479 kb on + strand, within PS417_11795 at 2567.479 kb on + strand, within PS417_11795 at 2567.479 kb on + strand, within PS417_11795 at 2567.505 kb on + strand, within PS417_11795 at 2567.763 kb on + strand, within PS417_11795 at 2567.764 kb on - strand, within PS417_11795 at 2567.857 kb on - strand, within PS417_11795 at 2567.940 kb on + strand, within PS417_11795 at 2567.941 kb on - strand, within PS417_11795 at 2567.941 kb on - strand, within PS417_11795 at 2568.063 kb on + strand, within PS417_11795 at 2568.147 kb on - strand, within PS417_11795 at 2568.280 kb on - strand at 2568.349 kb on - strand at 2568.823 kb on + strand at 2568.823 kb on + strand, within PS417_11800 at 2568.823 kb on + strand, within PS417_11800 at 2568.824 kb on - strand, within PS417_11800 at 2568.824 kb on - strand, within PS417_11800 at 2568.824 kb on - strand, within PS417_11800 at 2568.833 kb on + strand, within PS417_11800 at 2568.910 kb on + strand, within PS417_11800 at 2568.910 kb on + strand, within PS417_11800 at 2568.911 kb on - strand at 2569.265 kb on + strand at 2569.266 kb on - strand at 2569.312 kb on + strand at 2569.313 kb on - strand at 2569.572 kb on + strand, within PS417_11805 at 2569.572 kb on + strand, within PS417_11805 at 2569.573 kb on - strand, within PS417_11805 at 2569.772 kb on + strand, within PS417_11805 at 2569.772 kb on + strand, within PS417_11805 at 2569.857 kb on + strand, within PS417_11805 at 2569.857 kb on + strand, within PS417_11805 at 2569.935 kb on - strand, within PS417_11805
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source D-Mannitol 10 mM remove 2,567,479 + PS417_11795 0.38 -0.4 2,567,479 + PS417_11795 0.38 +1.1 2,567,479 + PS417_11795 0.38 -0.4 2,567,505 + PS417_11795 0.40 -1.0 2,567,763 + PS417_11795 0.60 -0.7 2,567,764 - PS417_11795 0.60 +0.1 2,567,857 - PS417_11795 0.67 -0.9 2,567,940 + PS417_11795 0.74 +0.0 2,567,941 - PS417_11795 0.74 -0.2 2,567,941 - PS417_11795 0.74 +0.0 2,568,063 + PS417_11795 0.83 -0.2 2,568,147 - PS417_11795 0.90 -0.4 2,568,280 - -1.0 2,568,349 - +0.2 2,568,823 + +0.6 2,568,823 + PS417_11800 0.57 -0.0 2,568,823 + PS417_11800 0.57 -0.3 2,568,824 - PS417_11800 0.58 +0.1 2,568,824 - PS417_11800 0.58 +1.4 2,568,824 - PS417_11800 0.58 +1.0 2,568,833 + PS417_11800 0.59 +0.7 2,568,910 + PS417_11800 0.67 +1.4 2,568,910 + PS417_11800 0.67 +0.4 2,568,911 - +1.6 2,569,265 + +0.4 2,569,266 - +0.4 2,569,312 + +0.1 2,569,313 - +0.4 2,569,572 + PS417_11805 0.25 +2.4 2,569,572 + PS417_11805 0.25 -0.3 2,569,573 - PS417_11805 0.26 +0.2 2,569,772 + PS417_11805 0.45 -0.3 2,569,772 + PS417_11805 0.45 -0.7 2,569,857 + PS417_11805 0.54 +1.5 2,569,857 + PS417_11805 0.54 -0.3 2,569,935 - PS417_11805 0.62 +0.0
Or see this region's nucleotide sequence