Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS18750

Experiment: M9+sucrose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+sucrose
4,202,772	+				-1.8
4,202,773	-				-1.0
4,202,773	-				-3.2
4,202,773	-				+1.8
4,202,773	-				-0.2
4,202,773	-				+0.4
4,202,773	-				-0.6
4,202,773	-				-0.1
4,202,773	-				-0.2
4,202,773	-				-0.6
4,202,773	-				+1.7
4,202,773	-				-0.2
4,202,788	+				-1.0
4,202,789	-				+0.4
4,202,789	-				-1.1
4,202,808	+				-0.6
4,202,808	+				-2.0
4,202,808	+				-0.3
4,202,808	+				-1.2
4,202,809	-				+1.9
4,202,809	-				-1.6
4,202,809	-				-2.2
4,202,809	-				-1.1
4,202,809	-				-0.1
4,202,829	+				-2.0
4,202,869	-				+2.2
4,202,896	+				-0.3
4,202,896	+				+2.9
4,202,896	+				-1.1
4,202,896	+				-0.4
4,202,897	-				+1.7
4,202,897	-				+0.2
4,202,918	+				+0.0
4,202,918	+				-1.0
4,202,918	+				+1.2
4,202,918	+				-1.0
4,202,918	+				-1.6
4,202,918	+				-1.2
4,202,918	+				+1.2
4,202,919	-				+1.9
4,202,919	-				+0.4
4,202,919	-				+1.7
4,202,919	-				-0.4
4,202,919	-				-0.2
4,202,982	-		HGI48_RS18745	0.15	-0.6
4,202,985	-		HGI48_RS18745	0.15	-1.4
4,202,985	-		HGI48_RS18745	0.15	+0.5
4,202,985	-		HGI48_RS18745	0.15	-2.1
4,202,985	-		HGI48_RS18745	0.15	-1.5
4,202,985	-		HGI48_RS18745	0.15	+0.1
4,202,985	-		HGI48_RS18745	0.15	-1.6
4,203,042	-		HGI48_RS18745	0.27	-0.2
4,203,042	-		HGI48_RS18745	0.27	-0.6
4,203,106	-		HGI48_RS18745	0.41	+1.8
4,203,239	-		HGI48_RS18745	0.69	+0.4
4,203,239	-		HGI48_RS18745	0.69	-0.1
4,203,272	-		HGI48_RS18745	0.76	-0.2
4,203,302	-		HGI48_RS18745	0.83	-1.0
4,203,365	+				-1.1
4,203,366	-				+0.4
4,203,366	-				+1.8
4,203,366	-				-1.6
4,203,366	-				-2.1
4,203,527	+				+0.1
4,203,528	-				+1.9
4,203,528	-				-0.6
4,203,536	+				+0.8
4,203,536	+				+0.6
4,203,538	+				-1.4
4,203,539	-				+0.1
4,203,539	-				-0.4
4,203,647	+				-0.1
4,203,648	-				-1.2
4,203,650	+				+0.4
4,203,650	+				+0.7
4,203,650	+				-1.2
4,203,650	+				+0.3
4,203,650	+				-0.4
4,203,650	+				-1.0
4,203,651	-				+2.6
4,203,651	-				+0.1
4,203,651	-				-1.2
4,203,651	-				-0.6
4,203,651	-				+0.1
4,203,651	-				-1.6
4,203,651	-				-2.2
4,203,651	-				+0.4
4,203,651	-				-1.0
4,203,678	-				+0.4
4,203,700	+		HGI48_RS18750	0.11	-1.4
4,203,701	-		HGI48_RS18750	0.11	+0.2
4,203,701	-		HGI48_RS18750	0.11	+0.8
4,203,861	+		HGI48_RS18750	0.21	-1.2
4,203,861	+		HGI48_RS18750	0.21	-1.6
4,203,861	+		HGI48_RS18750	0.21	-0.5
4,203,861	+		HGI48_RS18750	0.21	-0.6
4,203,861	+		HGI48_RS18750	0.21	-0.2
4,203,861	+		HGI48_RS18750	0.21	-0.8
4,203,861	+		HGI48_RS18750	0.21	+0.4
4,203,862	-		HGI48_RS18750	0.21	+0.2
4,203,862	-		HGI48_RS18750	0.21	+1.1
4,203,862	-		HGI48_RS18750	0.21	-0.0
4,203,862	-		HGI48_RS18750	0.21	-1.0
4,203,862	-				-1.0
4,203,862	-		HGI48_RS18750	0.21	-0.3
4,203,862	-		HGI48_RS18750	0.21	-1.4
4,203,862	-		HGI48_RS18750	0.21	-0.4
4,203,978	+		HGI48_RS18750	0.29	+0.4
4,204,179	+		HGI48_RS18750	0.42	+1.9
4,204,179	+		HGI48_RS18750	0.42	-0.6
4,204,180	-		HGI48_RS18750	0.42	+0.0
4,204,180	-		HGI48_RS18750	0.42	+0.4
4,204,180	-		HGI48_RS18750	0.42	+0.8
4,204,180	-				-1.0
4,204,180	-		HGI48_RS18750	0.42	+3.4
4,204,180	-		HGI48_RS18750	0.42	+0.4
4,204,331	+		HGI48_RS18750	0.52	+1.4
4,204,422	+		HGI48_RS18750	0.58	+1.2
4,204,422	+		HGI48_RS18750	0.58	+0.7
4,204,423	-				-1.0
4,204,423	-		HGI48_RS18750	0.58	-2.1
4,204,456	-				-2.0
4,204,524	+		HGI48_RS18750	0.65	-2.1
4,204,674	+				-0.2
4,204,674	+		HGI48_RS18750	0.75	+0.4
4,204,674	+				+0.0
4,204,675	-		HGI48_RS18750	0.75	-0.4
4,204,675	-		HGI48_RS18750	0.75	-0.4
4,204,675	-		HGI48_RS18750	0.75	-0.3
4,204,675	-		HGI48_RS18750	0.75	-1.6
4,204,675	-		HGI48_RS18750	0.75	-0.1
4,204,675	-		HGI48_RS18750	0.75	-0.2
4,204,675	-		HGI48_RS18750	0.75	+0.4
4,204,675	-		HGI48_RS18750	0.75	-1.1
4,204,675	-				-1.6
4,204,675	-		HGI48_RS18750	0.75	-0.2
4,204,676	+		HGI48_RS18750	0.75	+0.5
4,204,676	+		HGI48_RS18750	0.75	+0.4
4,204,676	+		HGI48_RS18750	0.75	+0.9
4,204,676	+		HGI48_RS18750	0.75	+1.4
4,204,677	-				+0.8
4,204,677	-		HGI48_RS18750	0.75	+1.1
4,204,677	-		HGI48_RS18750	0.75	+1.2
4,204,677	-		HGI48_RS18750	0.75	-1.1
4,204,677	-		HGI48_RS18750	0.75	-0.2
4,204,677	-				-0.4
4,204,677	-		HGI48_RS18750	0.75	-1.4
4,204,677	-		HGI48_RS18750	0.75	-1.2
4,204,677	-		HGI48_RS18750	0.75	-0.2
4,204,677	-		HGI48_RS18750	0.75	+1.3
4,204,716	-		HGI48_RS18750	0.77	-0.6
4,204,716	-		HGI48_RS18750	0.77	+0.0
4,204,956	-				-0.4
4,205,154	+				-0.6
4,205,155	-				-0.2
4,205,283	+				-1.2
4,205,284	-				-0.2
4,205,302	+				+0.1
4,205,302	+				-2.4
4,205,303	-				-0.1
4,205,325	-				-2.5
4,205,389	+				-0.6
4,205,389	+				+1.0
4,205,414	-				-0.2
4,205,613	+		HGI48_RS18755	0.14	-1.2
4,205,613	+		HGI48_RS18755	0.14	-0.0
4,205,636	+		HGI48_RS18755	0.16	-1.0
4,205,636	+		HGI48_RS18755	0.16	-1.8
4,205,726	+		HGI48_RS18755	0.22	-1.0
4,205,726	+		HGI48_RS18755	0.22	+0.4
4,205,726	+		HGI48_RS18755	0.22	+1.4
4,205,727	-		HGI48_RS18755	0.22	-0.8
4,205,888	+		HGI48_RS18755	0.33	-0.5
4,205,921	+		HGI48_RS18755	0.36	+0.4
4,205,921	+		HGI48_RS18755	0.36	+2.7
4,205,922	-		HGI48_RS18755	0.36	+0.4
4,205,922	-		HGI48_RS18755	0.36	-1.0
4,205,922	-		HGI48_RS18755	0.36	-0.4
4,205,922	-				-0.2
4,205,954	+		HGI48_RS18755	0.38	-0.9
4,205,954	+				+0.6
4,205,954	+		HGI48_RS18755	0.38	-0.1
4,205,954	+		HGI48_RS18755	0.38	+0.9
4,205,954	+		HGI48_RS18755	0.38	-0.6
4,205,954	+		HGI48_RS18755	0.38	-1.2
4,205,954	+		HGI48_RS18755	0.38	+0.1
4,205,954	+		HGI48_RS18755	0.38	+0.0
4,205,955	-		HGI48_RS18755	0.38	-0.1
4,205,955	-		HGI48_RS18755	0.38	-0.6
4,205,955	-		HGI48_RS18755	0.38	+0.4
4,205,955	-		HGI48_RS18755	0.38	-0.2
4,205,955	-		HGI48_RS18755	0.38	-0.1
4,205,955	-		HGI48_RS18755	0.38	+0.0
4,205,955	-		HGI48_RS18755	0.38	-0.2
4,206,041	+		HGI48_RS18755	0.44	+1.8
4,206,041	+		HGI48_RS18755	0.44	-1.0
4,206,041	+		HGI48_RS18755	0.44	-0.1
4,206,041	+		HGI48_RS18755	0.44	-0.7
4,206,041	+		HGI48_RS18755	0.44	+0.3
4,206,041	+		HGI48_RS18755	0.44	+1.4
4,206,041	+		HGI48_RS18755	0.44	-0.2
4,206,042	-		HGI48_RS18755	0.44	+3.2
4,206,042	-		HGI48_RS18755	0.44	-0.6
4,206,042	-		HGI48_RS18755	0.44	+1.9
4,206,042	-		HGI48_RS18755	0.44	+0.8
4,206,042	-		HGI48_RS18755	0.44	-1.0
4,206,042	-		HGI48_RS18755	0.44	-1.8