Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS16590

Experiment: M9+sucrose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+sucrose
3,718,436	+				+2.6
3,718,436	+				-0.9
3,718,436	+				+0.8
3,718,436	+				+0.6
3,718,436	+				+2.7
3,718,437	-				-0.7
3,718,437	-				-0.7
3,718,437	-				+0.4
3,718,437	-				-0.2
3,718,437	-				-1.7
3,718,438	+				-0.9
3,718,439	-				-0.8
3,718,439	-				-2.6
3,718,442	-				+0.6
3,718,446	+				-0.8
3,718,446	+				+1.1
3,718,446	+				+0.4
3,718,446	+				+0.3
3,718,446	+				-0.7
3,718,446	+				-0.2
3,718,446	+				-0.3
3,718,446	+				-1.7
3,718,447	-				+1.5
3,718,447	-				-0.2
3,718,447	-				-0.6
3,718,447	-				-0.9
3,718,447	-				-0.2
3,718,447	-				-1.1
3,718,447	-				-1.0
3,718,447	-				+0.4
3,718,568	+				-1.2
3,718,569	-				+0.1
3,718,569	-				-0.6
3,718,586	-				-1.0
3,718,742	+				+2.4
3,718,743	-				+1.7
3,718,743	-				+0.1
3,718,743	-				+0.1
3,718,743	-				-1.4
3,718,815	+				+0.0
3,718,824	+				+0.4
3,718,824	+				-0.4
3,718,824	+				-2.0
3,718,824	+				+0.3
3,718,824	+				-0.6
3,718,825	-				+1.7
3,718,895	+				-0.1
3,718,896	-				-1.0
3,718,896	-				-0.5
3,718,896	-				+0.5
3,718,896	-				-0.2
3,718,896	-				-0.9
3,718,938	-				-1.6
3,718,938	-				-1.7
3,718,938	-				+1.1
3,719,057	+				+0.4
3,719,058	-				+1.5
3,719,058	-				+1.7
3,719,064	+				-0.4
3,719,064	+				+0.1
3,719,064	+				-0.4
3,719,065	-				-0.8
3,719,065	-				-0.2
3,719,108	+				-0.7
3,719,109	-				-0.6
3,719,109	-				-0.9
3,719,113	+				-0.3
3,719,113	+				-0.4
3,719,113	+				+0.1
3,719,114	-				-0.5
3,719,114	-				-0.5
3,719,114	-				-0.1
3,719,114	-				-0.6
3,719,114	-				+0.3
3,719,114	-				+1.9
3,719,114	-				+0.3
3,719,114	-				+0.8
3,719,114	-				+0.1
3,719,114	-				+0.1
3,719,238	+				-2.3
3,719,238	+				-1.9
3,719,238	+				-3.4
3,719,238	+				-1.4
3,719,238	+				-1.7
3,719,238	+				+0.6
3,719,238	+				-0.2
3,719,239	-				-1.1
3,719,239	-				-0.1
3,719,239	-				+0.5
3,719,239	-				+0.2
3,719,239	-				+1.4
3,719,260	+				+0.8
3,719,261	-				-0.6
3,719,438	+				-0.7
3,719,439	-				+0.4
3,719,514	+		HGI48_RS16590	0.18	+1.1
3,719,514	+		HGI48_RS16590	0.18	-1.2
3,719,514	+				+0.6
3,719,515	-		HGI48_RS16590	0.18	-0.3
3,719,619	+		HGI48_RS16590	0.42	-2.2
3,719,619	+		HGI48_RS16590	0.42	-1.0
3,719,619	+		HGI48_RS16590	0.42	-2.3
3,719,620	-		HGI48_RS16590	0.42	-0.2
3,719,750	+		HGI48_RS16590	0.72	-0.2
3,719,751	-		HGI48_RS16590	0.72	+0.6
3,719,751	-		HGI48_RS16590	0.72	-1.6
3,719,751	-		HGI48_RS16590	0.72	+1.1
3,719,752	+		HGI48_RS16590	0.72	+1.9
3,719,820	+		HGI48_RS16590	0.87	-0.9
3,719,820	+				-1.7
3,719,820	+				-1.9
3,719,820	+		HGI48_RS16590	0.87	-0.7
3,719,820	+		HGI48_RS16590	0.87	+0.0
3,719,820	+		HGI48_RS16590	0.87	-0.1
3,719,821	-		HGI48_RS16590	0.88	-0.9
3,719,821	-		HGI48_RS16590	0.88	-1.2
3,719,822	+		HGI48_RS16590	0.88	-0.3
3,719,822	+		HGI48_RS16590	0.88	+1.9
3,719,822	+				-1.9
3,719,822	+		HGI48_RS16590	0.88	+1.9
3,719,835	+				-2.2
3,719,851	+				+0.4
3,719,904	+				+1.2
3,719,904	+				-0.1
3,719,904	+				+0.5
3,719,904	+				-1.4
3,719,904	+				+0.1
3,719,904	+				+0.6
3,719,904	+				-1.2
3,719,904	+				+0.6
3,719,904	+				-0.7
3,719,904	+				+2.0
3,719,904	+				-1.3
3,719,905	-				-0.9
3,719,905	-				+0.1
3,719,905	-				-1.1
3,719,905	-				-0.2
3,719,905	-				-0.3
3,719,905	-				-0.9
3,719,905	-				-0.4
3,719,905	-				-1.3
3,719,905	-				-0.1
3,719,905	-				+0.6
3,719,905	-				+0.8
3,719,906	+				+0.7
3,719,906	+				-0.0
3,719,906	+				-0.4
3,719,906	+				-1.2
3,719,906	+				-2.2
3,719,906	+				-1.9
3,719,907	-				+1.9
3,719,907	-				+0.1
3,719,907	-				+1.0
3,719,912	+				-1.4
3,719,913	-				+0.7
3,719,913	-				-1.7
3,719,916	+				+0.5
3,719,916	+				+1.0
3,719,916	+				-1.9
3,719,916	+				-1.6
3,719,916	+				+1.1
3,719,916	+				-0.7
3,719,916	+				+1.6
3,719,917	-				-1.7
3,719,917	-				+0.1
3,719,917	-				-0.4
3,719,917	-				+0.7
3,719,917	-				-2.6
3,719,917	-				+0.7
3,719,917	-				-1.4
3,719,917	-				+0.1
3,719,918	+				-0.1
3,719,918	+				+1.9
3,719,933	+				-2.1
3,719,967	+				+0.7
3,719,967	+				-1.9
3,719,968	-				+1.6
3,719,991	+				-2.0
3,719,991	+				-2.8
3,719,992	-				-2.8
3,719,992	-				+0.3
3,719,992	-				-2.9
3,719,993	+				-0.6
3,719,993	+				+1.0
3,719,993	+				+2.0
3,719,994	-				+0.1
3,720,015	-				-0.7
3,720,017	+				+0.3
3,720,017	+				+1.9
3,720,023	+				-0.4
3,720,023	+				+1.4
3,720,035	+				-0.4
3,720,035	+				+0.2
3,720,035	+				+0.9
3,720,035	+				+0.1
3,720,035	+				+0.0
3,720,051	+				+0.3
3,720,051	+		HGI48_RS16595	0.16	+1.2
3,720,052	-		HGI48_RS16595	0.17	+2.0
3,720,052	-		HGI48_RS16595	0.17	-0.9
3,720,052	-		HGI48_RS16595	0.17	+1.4
3,720,064	+		HGI48_RS16595	0.33	+0.5
3,720,106	+		HGI48_RS16595	0.88	-0.4
3,720,106	+		HGI48_RS16595	0.88	+0.1
3,720,107	-				+1.1
3,720,199	+				+0.4
3,720,200	-				+0.7
3,720,307	+				-0.7
3,720,308	-				-1.2
3,720,308	-				-1.6
3,720,308	-				-0.2
3,720,309	+				-1.4
3,720,310	-				-2.7
3,720,310	-				+0.3
3,720,310	-				-0.9
3,720,429	+		HGI48_RS16600	0.13	-2.9
3,720,429	+		HGI48_RS16600	0.13	+1.1
3,720,429	+		HGI48_RS16600	0.13	+0.1
3,720,430	-		HGI48_RS16600	0.13	-1.7
3,720,431	+		HGI48_RS16600	0.13	-0.9
3,720,597	+		HGI48_RS16600	0.26	-2.6
3,720,598	-		HGI48_RS16600	0.26	+1.1
3,720,782	+		HGI48_RS16600	0.41	-1.7
3,720,844	+		HGI48_RS16600	0.46	-0.9
3,720,844	+		HGI48_RS16600	0.46	-1.0