Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS17965

Experiment: M9+sucrose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHGI48_RS17960 and HGI48_RS17965 overlap by 4 nucleotidesHGI48_RS17965 and HGI48_RS17970 are separated by 164 nucleotides HGI48_RS17960: HGI48_RS17960 - cell division protein FtsA, at 4,029,393 to 4,030,649 _RS17960 HGI48_RS17965: HGI48_RS17965 - cell division protein FtsQ, at 4,030,646 to 4,031,500 _RS17965 HGI48_RS17970: HGI48_RS17970 - UDP-N-acetylmuramate--L-alanine ligase, at 4,031,665 to 4,033,125 _RS17970 Position (kb) 4030 4031 4032Strain fitness (log2 ratio) -2 -1 0 1 2at 4031.501 kb on - strandat 4031.621 kb on - strandat 4031.621 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction M9+sucrose
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4,031,501 - +2.7
4,031,621 - -1.9
4,031,621 - +0.2

Or see this region's nucleotide sequence