Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS14305

Experiment: M9+polygalacturonate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+polygalacturonate
3,122,516	+				-0.9
3,122,645	+				+1.0
3,122,678	+				+0.4
3,122,683	-				+1.4
3,122,689	-				-0.2
3,122,747	+				-2.2
3,122,813	+				-0.4
3,122,814	-				-0.5
3,122,818	-				+0.1
3,122,831	+				+1.8
3,122,832	-				-0.1
3,122,832	-				+0.4
3,122,942	+				+0.7
3,122,942	+				+1.4
3,122,943	-				+0.0
3,122,953	+				-0.1
3,123,018	+				+0.2
3,123,019	-				+0.9
3,123,019	-				-0.3
3,123,023	+				+0.1
3,123,050	+				+0.7
3,123,050	+				+0.1
3,123,054	+				-1.5
3,123,107	-				-0.7
3,123,123	+				+0.1
3,123,140	+				-1.5
3,123,140	+				+0.2
3,123,140	+				-0.9
3,123,141	-				-0.6
3,123,141	-				-1.4
3,123,149	+				-0.6
3,123,149	+				+0.2
3,123,157	+				+0.4
3,123,157	+				-0.2
3,123,158	-				-0.8
3,123,158	-				+0.4
3,123,158	-				-1.8
3,123,158	-				+0.0
3,123,160	+				+0.2
3,123,160	+				+0.9
3,123,160	+				-1.6
3,123,161	-				-0.9
3,123,161	-				-0.0
3,123,172	+				-0.2
3,123,172	+				+0.4
3,123,172	+				+0.8
3,123,172	+				+0.7
3,123,173	-				+0.1
3,123,173	-				-1.6
3,123,183	+				+1.0
3,123,183	+				-0.1
3,123,183	+				-1.2
3,123,357	+				-0.3
3,123,368	+				-0.3
3,123,368	+				+1.3
3,123,368	+				+0.4
3,123,369	-				-2.2
3,123,376	+				-1.1
3,123,376	+				-0.3
3,123,376	+				+1.3
3,123,376	+				-0.0
3,123,376	+				-2.6
3,123,377	-				-0.5
3,123,377	-				+0.1
3,123,377	-				-0.0
3,123,378	+				-1.6
3,123,379	-				-0.6
3,123,444	+				+2.0
3,123,449	+				+0.1
3,123,449	+				+0.8
3,123,449	+				+0.2
3,123,449	+				+0.2
3,123,449	+				-1.2
3,123,449	+				+0.1
3,123,449	+				-0.9
3,123,449	+				+0.2
3,123,449	+				-0.9
3,123,449	+				+0.4
3,123,449	+				+1.6
3,123,449	+				-0.2
3,123,450	-				+0.4
3,123,450	-				-0.1
3,123,450	-				-1.6
3,123,450	-				-0.3
3,123,450	-				+0.4
3,123,450	-				-1.6
3,123,450	-				-0.0
3,123,493	+				-0.3
3,123,534	+				-0.6
3,123,534	+				-0.1
3,123,534	+				+0.2
3,123,535	-				+0.4
3,123,535	-				-1.3
3,123,593	-		DZA65_RS14305	0.10	+1.0
3,123,613	+		DZA65_RS14305	0.11	+0.4
3,123,614	-		DZA65_RS14305	0.12	-0.0
3,123,623	+		DZA65_RS14305	0.12	+0.1
3,123,623	+		DZA65_RS14305	0.12	-0.6
3,123,623	+		DZA65_RS14305	0.12	-0.1
3,123,624	-		DZA65_RS14305	0.12	+0.9
3,123,624	-		DZA65_RS14305	0.12	+0.4
3,123,624	-		DZA65_RS14305	0.12	+0.7
3,123,624	-		DZA65_RS14305	0.12	-1.3
3,123,691	+		DZA65_RS14305	0.17	+0.1
3,123,691	+		DZA65_RS14305	0.17	+0.1
3,123,691	+		DZA65_RS14305	0.17	+0.7
3,123,692	-		DZA65_RS14305	0.17	-0.0
3,123,695	+		DZA65_RS14305	0.17	-0.9
3,123,695	+		DZA65_RS14305	0.17	-1.9
3,123,695	+		DZA65_RS14305	0.17	-1.9
3,123,707	-		DZA65_RS14305	0.18	+0.9
3,123,765	-		DZA65_RS14305	0.22	-1.2
3,123,765	-		DZA65_RS14305	0.22	+0.9
3,123,891	+		DZA65_RS14305	0.31	-0.6
3,123,891	+		DZA65_RS14305	0.31	-0.3
3,123,891	+		DZA65_RS14305	0.31	+0.4
3,123,892	-		DZA65_RS14305	0.31	-0.6
3,123,892	-		DZA65_RS14305	0.31	+0.3
3,123,892	-		DZA65_RS14305	0.31	+1.2
3,124,006	+		DZA65_RS14305	0.39	-0.9
3,124,006	+		DZA65_RS14305	0.39	-0.3
3,124,006	+		DZA65_RS14305	0.39	+1.1
3,124,006	+		DZA65_RS14305	0.39	+0.9
3,124,007	-		DZA65_RS14305	0.40	+0.1
3,124,007	-		DZA65_RS14305	0.40	-2.4
3,124,206	+		DZA65_RS14305	0.54	-0.2
3,124,210	+		DZA65_RS14305	0.54	+0.3
3,124,210	+		DZA65_RS14305	0.54	-1.6
3,124,210	+		DZA65_RS14305	0.54	-2.3
3,124,210	+		DZA65_RS14305	0.54	-1.4
3,124,210	+		DZA65_RS14305	0.54	+0.4
3,124,210	+		DZA65_RS14305	0.54	-0.0
3,124,210	+		DZA65_RS14305	0.54	-0.1
3,124,210	+		DZA65_RS14305	0.54	+0.4
3,124,210	+		DZA65_RS14305	0.54	-0.6
3,124,211	-		DZA65_RS14305	0.54	-0.2
3,124,211	-		DZA65_RS14305	0.54	-1.8
3,124,211	-		DZA65_RS14305	0.54	+0.0
3,124,211	-		DZA65_RS14305	0.54	+0.0
3,124,211	-		DZA65_RS14305	0.54	+0.7
3,124,211	-		DZA65_RS14305	0.54	-0.4
3,124,211	-		DZA65_RS14305	0.54	+0.4
3,124,211	-		DZA65_RS14305	0.54	-1.4
3,124,216	+		DZA65_RS14305	0.54	-1.1
3,124,217	-		DZA65_RS14305	0.54	+0.2
3,124,217	-		DZA65_RS14305	0.54	-0.9
3,124,223	+		DZA65_RS14305	0.55	-0.2
3,124,223	+		DZA65_RS14305	0.55	-0.4
3,124,223	+		DZA65_RS14305	0.55	-0.8
3,124,223	+		DZA65_RS14305	0.55	-1.2
3,124,224	-		DZA65_RS14305	0.55	-0.0
3,124,227	+		DZA65_RS14305	0.55	-2.4
3,124,228	-		DZA65_RS14305	0.55	-0.2
3,124,246	+		DZA65_RS14305	0.57	-1.2
3,124,246	+		DZA65_RS14305	0.57	+0.4
3,124,246	+		DZA65_RS14305	0.57	+0.4
3,124,247	-		DZA65_RS14305	0.57	+0.4
3,124,247	-		DZA65_RS14305	0.57	-0.2
3,124,247	-		DZA65_RS14305	0.57	+1.0
3,124,247	-		DZA65_RS14305	0.57	+0.9
3,124,247	-		DZA65_RS14305	0.57	-1.2
3,124,247	-		DZA65_RS14305	0.57	+0.6
3,124,296	+		DZA65_RS14305	0.60	-2.1
3,124,297	-		DZA65_RS14305	0.60	+1.1
3,124,410	+		DZA65_RS14305	0.68	-0.2
3,124,410	+		DZA65_RS14305	0.68	-1.2
3,124,411	-		DZA65_RS14305	0.68	+0.1
3,124,411	-		DZA65_RS14305	0.68	+0.8
3,124,411	-		DZA65_RS14305	0.68	+0.5
3,124,532	+		DZA65_RS14305	0.77	+0.6
3,124,532	+		DZA65_RS14305	0.77	-0.4
3,124,532	+				-0.2
3,124,532	+		DZA65_RS14305	0.77	-1.2
3,124,533	-		DZA65_RS14305	0.77	-0.2
3,124,533	-		DZA65_RS14305	0.77	-1.9
3,124,536	+		DZA65_RS14305	0.77	+0.1
3,124,536	+		DZA65_RS14305	0.77	-0.1
3,124,536	+		DZA65_RS14305	0.77	-1.1
3,124,536	+		DZA65_RS14305	0.77	+0.4
3,124,536	+		DZA65_RS14305	0.77	+0.4
3,124,536	+		DZA65_RS14305	0.77	-2.2
3,124,537	-		DZA65_RS14305	0.77	-0.5
3,124,537	-		DZA65_RS14305	0.77	-0.2
3,124,537	-		DZA65_RS14305	0.77	+0.9
3,124,549	+		DZA65_RS14305	0.78	-1.0
3,124,550	-		DZA65_RS14305	0.78	+1.0
3,124,609	+		DZA65_RS14305	0.82	+1.4
3,124,609	+		DZA65_RS14305	0.82	-0.9
3,124,610	-		DZA65_RS14305	0.82	+2.0
3,124,625	+		DZA65_RS14305	0.84	-0.4
3,124,625	+		DZA65_RS14305	0.84	+0.4
3,124,625	+		DZA65_RS14305	0.84	+0.2
3,124,625	+		DZA65_RS14305	0.84	+1.9
3,124,626	-		DZA65_RS14305	0.84	-1.9
3,124,626	-		DZA65_RS14305	0.84	+0.0
3,124,626	-		DZA65_RS14305	0.84	-0.4
3,124,673	+		DZA65_RS14305	0.87	+0.6
3,124,674	-		DZA65_RS14305	0.87	+0.8
3,124,674	-		DZA65_RS14305	0.87	-1.2
3,124,692	+		DZA65_RS14305	0.88	+1.6
3,124,692	+		DZA65_RS14305	0.88	+0.4
3,124,692	+		DZA65_RS14305	0.88	-0.8
3,124,692	+		DZA65_RS14305	0.88	-0.1
3,124,692	+		DZA65_RS14305	0.88	-0.3
3,124,692	+		DZA65_RS14305	0.88	-0.6
3,124,695	+		DZA65_RS14305	0.89	-0.1
3,124,695	+		DZA65_RS14305	0.89	-1.1
3,124,695	+		DZA65_RS14305	0.89	-0.1
3,124,695	+		DZA65_RS14305	0.89	+0.6
3,124,696	-		DZA65_RS14305	0.89	-0.3
3,124,696	-		DZA65_RS14305	0.89	+0.2
3,124,696	-		DZA65_RS14305	0.89	-0.6
3,124,696	-		DZA65_RS14305	0.89	+0.1
3,124,708	-		DZA65_RS14305	0.89	-0.2
3,124,738	-				+0.9
3,124,759	+				+1.6
3,124,780	+				-0.2
3,124,823	-				+0.7
3,124,858	+				-1.9
3,124,858	+				-0.9
3,124,858	+				+0.8
3,124,858	+				-0.3
3,124,858	+				-0.6
3,124,858	+				-0.1
3,124,858	+				+0.4
3,124,858	+				-1.8
3,124,859	-				+0.8
3,124,859	-				-0.2
3,124,859	-				-0.9
3,124,859	-				+1.7
3,124,859	-				-1.8
3,124,859	-				-1.6
3,124,859	-				+2.3
3,124,882	-				-0.2
3,124,892	-				+0.6
3,124,892	-				+1.0
3,124,892	-				-1.8
3,124,924	-				-0.1
3,124,924	-				-0.6
3,125,014	+		DZA65_RS14310	0.31	-0.6
3,125,047	+		DZA65_RS14310	0.43	-0.2
3,125,048	-		DZA65_RS14310	0.44	-2.2
3,125,119	+		DZA65_RS14310	0.70	-0.7
3,125,175	+				-0.6
3,125,176	-				+0.8
3,125,176	-				-0.2
3,125,176	-				+1.1
3,125,201	+				-1.2
3,125,202	-				+0.1
3,125,212	+				-0.3
3,125,216	+				+0.4
3,125,217	-				-0.1
3,125,286	-				+0.2
3,125,301	-				-0.6
3,125,304	+				-0.3
3,125,304	+				+0.4
3,125,332	-				-0.5
3,125,337	+				+0.9
3,125,337	+				+1.0
3,125,337	+				+0.2
3,125,338	-				+0.4
3,125,340	+				-1.4
3,125,340	+				-0.6
3,125,340	+				+1.4
3,125,340	+				+0.1
3,125,340	+				-0.2
3,125,340	+				-0.3
3,125,340	+				+0.6
3,125,341	-				-1.8
3,125,341	-				-0.2
3,125,411	+				-0.6
3,125,478	+				-3.1
3,125,478	+				+1.4
3,125,521	+				-1.9
3,125,559	+				-0.6
3,125,576	-				+0.7
3,125,602	-		DZA65_RS14315	0.26	-0.2
3,125,625	-		DZA65_RS14315	0.57	-0.3
3,125,692	+				+0.6
3,125,714	-				+0.2
3,125,818	+				+1.2
3,125,818	+				-0.6
3,125,818	+				-1.4
3,125,818	+				+0.4
3,125,818	+				-0.1
3,125,818	+				+0.7
3,125,818	+				-0.9
3,125,818	+				-0.2
3,125,818	+				+0.1
3,125,818	+				+1.4
3,125,818	+				-0.0
3,125,818	+				-0.6
3,125,818	+				+0.5
3,125,819	-				-0.2
3,125,819	-				+0.7
3,125,819	-				-0.9
3,125,819	-				-0.6
3,125,819	-				+1.0
3,125,819	-				+0.0
3,125,819	-				+1.0
3,125,819	-				-1.7
3,125,851	-				-0.9