Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS13850

Experiment: M9+polygalacturonate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+polygalacturonate
2,972,110	+		DZA65_RS13845	0.28	-0.4
2,972,152	+		DZA65_RS13845	0.31	-2.2
2,972,181	+		DZA65_RS13845	0.34	-0.1
2,972,181	+		DZA65_RS13845	0.34	+1.0
2,972,185	+		DZA65_RS13845	0.34	+1.2
2,972,186	-		DZA65_RS13845	0.35	+1.0
2,972,186	-		DZA65_RS13845	0.35	+0.4
2,972,186	-		DZA65_RS13845	0.35	+0.4
2,972,206	+		DZA65_RS13845	0.36	+0.9
2,972,206	+		DZA65_RS13845	0.36	-0.2
2,972,266	-		DZA65_RS13845	0.42	+0.4
2,972,299	+		DZA65_RS13845	0.45	+0.4
2,972,367	+		DZA65_RS13845	0.51	+0.7
2,972,367	+		DZA65_RS13845	0.51	+2.0
2,972,395	+		DZA65_RS13845	0.54	+0.4
2,972,395	+		DZA65_RS13845	0.54	+0.8
2,972,396	-		DZA65_RS13845	0.54	-1.2
2,972,514	+		DZA65_RS13845	0.65	-1.0
2,972,514	+		DZA65_RS13845	0.65	-1.0
2,972,515	-		DZA65_RS13845	0.65	-2.6
2,972,586	+				+0.8
2,972,586	+		DZA65_RS13845	0.71	+1.0
2,972,736	+		DZA65_RS13845	0.85	-0.1
2,972,737	-		DZA65_RS13845	0.85	-0.7
2,972,737	-		DZA65_RS13845	0.85	+0.0
2,972,746	+		DZA65_RS13845	0.86	-2.2
2,972,804	+				-0.0
2,972,804	+				-0.7
2,972,804	+				+0.1
2,972,804	+				+0.4
2,972,805	-				-0.0
2,972,805	-				-1.2
2,972,805	-				-0.3
2,972,805	-				+0.6
2,972,805	-				-1.0
2,972,805	-				-0.0
2,972,805	-				+0.1
2,972,808	+				-0.2
2,972,808	+				+0.4
2,972,808	+				+0.4
2,972,808	+				-0.6
2,972,809	-				+0.6
2,972,809	-				-0.2
2,972,809	-				+1.4
2,972,815	+				-2.0
2,972,816	-				-2.0
2,972,882	-				-0.2
2,972,890	+				+0.1
2,972,891	-				-1.6
2,972,891	-				+0.4
2,972,891	-				+1.0
2,972,912	+				-0.0
2,972,913	-				+0.0
2,973,003	-				+0.5
2,973,011	+				-0.6
2,973,012	-				-1.0
2,973,037	-				+2.0
2,973,042	-				+0.7
2,973,042	-				+1.2
2,973,042	-				-0.5
2,973,065	+				+1.0
2,973,090	-				-0.6
2,973,090	-				-0.3
2,973,117	+				+0.2
2,973,146	+				-1.2
2,973,185	+				+0.5
2,973,185	+				-0.6
2,973,186	-				+0.4
2,973,209	+		DZA65_RS13850	0.11	+0.8
2,973,210	-		DZA65_RS13850	0.11	-1.0
2,973,210	-		DZA65_RS13850	0.11	+0.0
2,973,210	-		DZA65_RS13850	0.11	+0.0
2,973,227	+		DZA65_RS13850	0.12	-0.9
2,973,227	+		DZA65_RS13850	0.12	-0.4
2,973,228	-		DZA65_RS13850	0.12	+0.4
2,973,228	-		DZA65_RS13850	0.12	-0.6
2,973,228	-		DZA65_RS13850	0.12	-1.2
2,973,230	+		DZA65_RS13850	0.13	+0.1
2,973,230	+		DZA65_RS13850	0.13	+0.8
2,973,230	+		DZA65_RS13850	0.13	-0.6
2,973,230	+		DZA65_RS13850	0.13	-0.1
2,973,230	+		DZA65_RS13850	0.13	+0.8
2,973,231	-		DZA65_RS13850	0.13	+0.1
2,973,231	-		DZA65_RS13850	0.13	+1.4
2,973,231	-		DZA65_RS13850	0.13	-0.1
2,973,231	-		DZA65_RS13850	0.13	+0.7
2,973,231	-		DZA65_RS13850	0.13	-0.6
2,973,231	-		DZA65_RS13850	0.13	+1.2
2,973,249	+		DZA65_RS13850	0.14	-0.2
2,973,250	-		DZA65_RS13850	0.14	+0.4
2,973,273	+		DZA65_RS13850	0.16	+1.3
2,973,284	+		DZA65_RS13850	0.17	-0.6
2,973,284	+		DZA65_RS13850	0.17	+1.4
2,973,284	+		DZA65_RS13850	0.17	-0.2
2,973,284	+		DZA65_RS13850	0.17	+1.4
2,973,284	+		DZA65_RS13850	0.17	+0.4
2,973,284	+		DZA65_RS13850	0.17	-0.2
2,973,284	+		DZA65_RS13850	0.17	-0.2
2,973,285	-		DZA65_RS13850	0.17	-0.0
2,973,335	+		DZA65_RS13850	0.22	-0.5
2,973,335	+		DZA65_RS13850	0.22	+0.5
2,973,335	+		DZA65_RS13850	0.22	+0.2
2,973,336	-		DZA65_RS13850	0.22	-0.6
2,973,351	+		DZA65_RS13850	0.23	+1.0
2,973,352	-		DZA65_RS13850	0.23	+1.0
2,973,413	+		DZA65_RS13850	0.29	-0.1
2,973,414	-		DZA65_RS13850	0.29	-0.6
2,973,461	+		DZA65_RS13850	0.33	+0.6
2,973,461	+		DZA65_RS13850	0.33	+1.1
2,973,462	-		DZA65_RS13850	0.33	-0.3
2,973,462	-		DZA65_RS13850	0.33	+0.8
2,973,468	-		DZA65_RS13850	0.34	+0.4
2,973,501	+		DZA65_RS13850	0.36	-0.5
2,973,502	-		DZA65_RS13850	0.37	+1.8
2,973,502	-		DZA65_RS13850	0.37	-1.2
2,973,502	-		DZA65_RS13850	0.37	+0.4
2,973,502	-		DZA65_RS13850	0.37	-0.1
2,973,514	-		DZA65_RS13850	0.38	-1.2
2,973,557	+		DZA65_RS13850	0.41	-2.0
2,973,557	+		DZA65_RS13850	0.41	-3.1
2,973,557	+		DZA65_RS13850	0.41	+0.4
2,973,557	+		DZA65_RS13850	0.41	-1.0
2,973,557	+		DZA65_RS13850	0.41	+0.8
2,973,557	+		DZA65_RS13850	0.41	-0.6
2,973,557	+		DZA65_RS13850	0.41	-1.2
2,973,558	-		DZA65_RS13850	0.41	-0.6
2,973,558	-		DZA65_RS13850	0.41	-0.2
2,973,558	-		DZA65_RS13850	0.41	-1.0
2,973,587	+		DZA65_RS13850	0.44	+0.6
2,973,587	+		DZA65_RS13850	0.44	+1.0
2,973,587	+		DZA65_RS13850	0.44	-1.7
2,973,587	+		DZA65_RS13850	0.44	+0.4
2,973,587	+		DZA65_RS13850	0.44	-0.1
2,973,587	+		DZA65_RS13850	0.44	-1.6
2,973,587	+		DZA65_RS13850	0.44	+1.2
2,973,587	+		DZA65_RS13850	0.44	-0.4
2,973,587	+		DZA65_RS13850	0.44	+0.0
2,973,587	+		DZA65_RS13850	0.44	-0.4
2,973,588	-		DZA65_RS13850	0.44	-0.6
2,973,588	-		DZA65_RS13850	0.44	+1.0
2,973,588	-		DZA65_RS13850	0.44	+0.4
2,973,588	-		DZA65_RS13850	0.44	+0.4
2,973,588	-		DZA65_RS13850	0.44	-0.2
2,973,588	-		DZA65_RS13850	0.44	+0.6
2,973,588	-		DZA65_RS13850	0.44	-0.4
2,973,588	-		DZA65_RS13850	0.44	-0.3
2,973,588	-		DZA65_RS13850	0.44	-1.6
2,973,588	-		DZA65_RS13850	0.44	-0.6
2,973,588	-		DZA65_RS13850	0.44	+1.2
2,973,588	-		DZA65_RS13850	0.44	-0.2
2,973,592	+		DZA65_RS13850	0.44	+0.4
2,973,592	+		DZA65_RS13850	0.44	+0.0
2,973,593	-		DZA65_RS13850	0.45	-0.6
2,973,593	-		DZA65_RS13850	0.45	-2.1
2,973,593	-		DZA65_RS13850	0.45	+0.6
2,973,593	-		DZA65_RS13850	0.45	+1.4
2,973,634	-		DZA65_RS13850	0.48	+0.4
2,973,804	-		DZA65_RS13850	0.63	+0.4
2,973,804	-		DZA65_RS13850	0.63	+0.6
2,973,804	-		DZA65_RS13850	0.63	-0.6
2,973,922	-		DZA65_RS13850	0.74	+0.0
2,973,937	-		DZA65_RS13850	0.75	+0.6
2,973,937	-		DZA65_RS13850	0.75	+2.7
2,974,022	+		DZA65_RS13850	0.82	+0.9
2,974,137	+				+1.5
2,974,138	-				+1.0
2,974,161	+				+1.4
2,974,161	+				-0.1
2,974,162	-				+0.5
2,974,162	-				-0.6
2,974,261	+				-1.2
2,974,261	+				-0.0
2,974,262	-				-3.1
2,974,262	-				+1.0
2,974,262	-				+2.1
2,974,262	-				-0.4
2,974,262	-				-0.0
2,974,277	+				+1.1
2,974,278	-				-0.0
2,974,285	-				-1.7
2,974,299	-				-0.6
2,974,299	-				+0.7
2,974,313	+				+2.0
2,974,314	-				-0.0
2,974,314	-				+0.5
2,974,314	-				+1.0
2,974,453	+		DZA65_RS13855	0.20	+1.0
2,974,454	+		DZA65_RS13855	0.20	+0.6
2,974,454	+		DZA65_RS13855	0.20	-0.4
2,974,454	+		DZA65_RS13855	0.20	-0.2
2,974,454	+		DZA65_RS13855	0.20	-0.0
2,974,455	-		DZA65_RS13855	0.20	+0.6
2,974,464	+		DZA65_RS13855	0.21	+1.0
2,974,468	+		DZA65_RS13855	0.21	+0.5
2,974,468	+		DZA65_RS13855	0.21	-1.2
2,974,468	+		DZA65_RS13855	0.21	-0.4
2,974,468	+		DZA65_RS13855	0.21	+0.6
2,974,468	+		DZA65_RS13855	0.21	-0.0
2,974,468	+		DZA65_RS13855	0.21	+0.0
2,974,468	+		DZA65_RS13855	0.21	+0.1
2,974,468	+		DZA65_RS13855	0.21	+0.5
2,974,468	+		DZA65_RS13855	0.21	+0.7
2,974,469	-		DZA65_RS13855	0.21	+3.0
2,974,469	-		DZA65_RS13855	0.21	+0.1
2,974,469	-		DZA65_RS13855	0.21	+0.4
2,974,469	-		DZA65_RS13855	0.21	-0.2
2,974,469	-		DZA65_RS13855	0.21	-0.7
2,974,469	-		DZA65_RS13855	0.21	-0.4
2,974,469	-		DZA65_RS13855	0.21	-0.1
2,974,469	-		DZA65_RS13855	0.21	+0.7
2,974,469	-		DZA65_RS13855	0.21	+0.7
2,974,469	-		DZA65_RS13855	0.21	+0.4
2,974,469	-		DZA65_RS13855	0.21	+0.3
2,974,469	-		DZA65_RS13855	0.21	-0.1
2,974,556	+		DZA65_RS13855	0.29	+0.2
2,974,556	+		DZA65_RS13855	0.29	-0.6
2,974,556	+				-0.6
2,974,557	-		DZA65_RS13855	0.29	+1.0
2,974,579	+		DZA65_RS13855	0.31	+0.6
2,974,611	+		DZA65_RS13855	0.33	-0.6
2,974,611	+		DZA65_RS13855	0.33	-0.1
2,974,611	+		DZA65_RS13855	0.33	-0.6
2,974,612	-		DZA65_RS13855	0.33	+0.1
2,974,612	-		DZA65_RS13855	0.33	-1.0
2,974,612	-		DZA65_RS13855	0.33	-1.0
2,974,612	-		DZA65_RS13855	0.33	+0.3
2,974,641	-		DZA65_RS13855	0.36	-0.1
2,974,641	-		DZA65_RS13855	0.36	-0.0
2,974,649	+		DZA65_RS13855	0.36	+1.1
2,974,649	+		DZA65_RS13855	0.36	+1.2
2,974,668	+		DZA65_RS13855	0.38	-0.1
2,974,668	+		DZA65_RS13855	0.38	-0.4
2,974,668	+		DZA65_RS13855	0.38	-1.4
2,974,668	+		DZA65_RS13855	0.38	-0.6
2,974,668	+		DZA65_RS13855	0.38	+3.0
2,974,668	+		DZA65_RS13855	0.38	-1.6
2,974,668	+		DZA65_RS13855	0.38	-0.0
2,974,668	+		DZA65_RS13855	0.38	-2.0
2,974,668	+		DZA65_RS13855	0.38	+0.8
2,974,669	-		DZA65_RS13855	0.38	-0.7
2,974,669	-		DZA65_RS13855	0.38	-0.8
2,974,688	+		DZA65_RS13855	0.40	+0.1
2,974,689	-		DZA65_RS13855	0.40	+1.1
2,974,697	+		DZA65_RS13855	0.41	-0.0
2,974,697	+		DZA65_RS13855	0.41	+0.2
2,974,697	+		DZA65_RS13855	0.41	+0.8
2,974,698	-		DZA65_RS13855	0.41	+0.7
2,974,698	-		DZA65_RS13855	0.41	-1.7
2,974,771	+		DZA65_RS13855	0.47	+1.6
2,974,772	-		DZA65_RS13855	0.47	-1.0
2,974,772	-		DZA65_RS13855	0.47	+0.3
2,974,772	-		DZA65_RS13855	0.47	+1.4
2,974,784	-		DZA65_RS13855	0.48	+0.8
2,974,820	+		DZA65_RS13855	0.51	-1.2
2,974,869	+		DZA65_RS13855	0.55	-0.9
2,974,870	-		DZA65_RS13855	0.55	-0.2
2,974,870	-		DZA65_RS13855	0.55	+1.0
2,974,870	-		DZA65_RS13855	0.55	+0.4
2,974,870	-		DZA65_RS13855	0.55	-0.4
2,974,870	-		DZA65_RS13855	0.55	+0.4
2,974,870	-		DZA65_RS13855	0.55	+0.4
2,974,870	-		DZA65_RS13855	0.55	+1.8
2,974,925	+		DZA65_RS13855	0.60	+0.7
2,974,926	-		DZA65_RS13855	0.60	-0.7
2,974,966	+		DZA65_RS13855	0.63	-0.1
2,974,966	+		DZA65_RS13855	0.63	-0.2
2,974,967	-		DZA65_RS13855	0.63	-1.2
2,974,967	-		DZA65_RS13855	0.63	+0.2
2,975,022	-		DZA65_RS13855	0.68	+1.4
2,975,022	-		DZA65_RS13855	0.68	+0.0
2,975,055	-		DZA65_RS13855	0.71	+1.2
2,975,066	-		DZA65_RS13855	0.72	+1.5
2,975,164	+		DZA65_RS13855	0.80	-0.3
2,975,165	-		DZA65_RS13855	0.80	+0.4
2,975,165	-		DZA65_RS13855	0.80	+1.7
2,975,165	-		DZA65_RS13855	0.80	-0.6
2,975,165	-		DZA65_RS13855	0.80	+0.1
2,975,165	-		DZA65_RS13855	0.80	+0.4
2,975,193	-		DZA65_RS13855	0.82	+0.9
2,975,193	-		DZA65_RS13855	0.82	-0.9
2,975,193	-		DZA65_RS13855	0.82	+1.3
2,975,198	+		DZA65_RS13855	0.83	-0.4
2,975,198	+		DZA65_RS13855	0.83	+2.3