Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS13830

Experiment: M9+polygalacturonate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+polygalacturonate
2,967,650	+		DZA65_RS13820	0.47	+0.4
2,967,650	+		DZA65_RS13820	0.47	-2.2
2,967,650	+				-1.0
2,967,650	+				-1.0
2,967,650	+		DZA65_RS13820	0.47	-1.2
2,967,651	-		DZA65_RS13820	0.47	+0.8
2,967,651	-		DZA65_RS13820	0.47	-0.4
2,967,651	-		DZA65_RS13820	0.47	+0.0
2,967,651	-		DZA65_RS13820	0.47	+1.4
2,967,651	-		DZA65_RS13820	0.47	-0.9
2,967,651	-		DZA65_RS13820	0.47	-0.2
2,967,744	+		DZA65_RS13820	0.59	-0.9
2,967,744	+		DZA65_RS13820	0.59	-0.6
2,967,744	+		DZA65_RS13820	0.59	+0.4
2,967,744	+		DZA65_RS13820	0.59	-0.6
2,967,744	+		DZA65_RS13820	0.59	+0.0
2,967,744	+		DZA65_RS13820	0.59	-2.1
2,967,745	-		DZA65_RS13820	0.59	+0.1
2,967,745	-		DZA65_RS13820	0.59	-3.1
2,967,747	+		DZA65_RS13820	0.60	-1.0
2,967,747	+		DZA65_RS13820	0.60	-0.4
2,967,747	+		DZA65_RS13820	0.60	+0.4
2,967,747	+		DZA65_RS13820	0.60	+1.4
2,967,747	+		DZA65_RS13820	0.60	+0.7
2,967,748	-		DZA65_RS13820	0.60	+0.0
2,967,763	-		DZA65_RS13820	0.62	-1.6
2,967,846	+		DZA65_RS13820	0.72	-1.0
2,967,853	+		DZA65_RS13820	0.73	-1.0
2,967,853	+		DZA65_RS13820	0.73	-0.6
2,967,866	+		DZA65_RS13820	0.75	-2.6
2,967,866	+		DZA65_RS13820	0.75	+0.7
2,967,866	+		DZA65_RS13820	0.75	-0.9
2,967,866	+		DZA65_RS13820	0.75	-0.3
2,967,866	+		DZA65_RS13820	0.75	-1.3
2,967,866	+		DZA65_RS13820	0.75	+0.4
2,967,866	+		DZA65_RS13820	0.75	+0.7
2,967,866	+		DZA65_RS13820	0.75	-0.1
2,967,866	+		DZA65_RS13820	0.75	+0.4
2,967,866	+		DZA65_RS13820	0.75	-0.2
2,967,867	-		DZA65_RS13820	0.75	-0.4
2,967,867	-		DZA65_RS13820	0.75	+0.5
2,967,867	-		DZA65_RS13820	0.75	+1.4
2,967,867	-		DZA65_RS13820	0.75	+0.0
2,967,867	-		DZA65_RS13820	0.75	+0.1
2,967,867	-		DZA65_RS13820	0.75	-0.4
2,967,928	-		DZA65_RS13820	0.83	+1.7
2,967,933	+		DZA65_RS13820	0.83	+0.0
2,967,933	+		DZA65_RS13820	0.83	-1.0
2,968,066	-				+0.0
2,968,066	-				-0.9
2,968,076	+				-0.0
2,968,076	+				-1.0
2,968,076	+				-1.0
2,968,077	-				-0.4
2,968,097	+				+0.7
2,968,098	-				-2.2
2,968,098	-				+0.2
2,968,147	+				+0.3
2,968,148	-				+1.4
2,968,148	-				+1.0
2,968,150	+				-2.3
2,968,150	+				-0.5
2,968,150	+				-0.1
2,968,150	+				+0.4
2,968,151	-				+0.4
2,968,151	-				-0.9
2,968,151	-				+0.0
2,968,207	+				-0.6
2,968,302	+				-0.1
2,968,303	-				+0.4
2,968,339	+				-0.3
2,968,343	+				+0.0
2,968,343	+				+1.0
2,968,344	-				-0.0
2,968,344	-				+0.4
2,968,362	+				-0.4
2,968,363	-				-0.5
2,968,384	+				+0.9
2,968,384	+				-0.7
2,968,385	-				+0.4
2,968,385	-				-0.0
2,968,385	-				-0.6
2,968,385	-				+0.7
2,968,385	-				-0.6
2,968,385	-				+0.8
2,968,415	+				-0.2
2,968,416	-				-1.0
2,968,416	-				+0.1
2,968,427	+				+0.0
2,968,428	-				-0.2
2,968,428	-				-0.0
2,968,489	+				-1.0
2,968,490	-				-0.0
2,968,503	+				+1.4
2,968,503	+				-0.6
2,968,503	+				+0.4
2,968,503	+				+0.8
2,968,503	+				-0.3
2,968,506	-				+0.4
2,968,506	-				-1.2
2,968,528	-				-1.0
2,968,548	+				-1.2
2,968,548	+				+0.8
2,968,548	+				-0.0
2,968,549	-				+2.2
2,968,554	+				-0.0
2,968,554	+				-0.4
2,968,555	-				+0.4
2,968,602	+				-0.6
2,968,602	+				+0.7
2,968,602	+				+0.7
2,968,602	+				-0.6
2,968,603	-				+0.4
2,968,603	-				+0.1
2,968,624	-				+0.0
2,968,633	-				-1.6
2,968,633	-				-0.2
2,968,633	-				-0.4
2,968,633	-				-0.3
2,968,653	+		DZA65_RS13830	0.11	-0.6
2,968,657	+		DZA65_RS13830	0.12	-0.4
2,968,657	+		DZA65_RS13830	0.12	+2.4
2,968,657	+		DZA65_RS13830	0.12	-0.6
2,968,657	+		DZA65_RS13830	0.12	-0.3
2,968,657	+		DZA65_RS13830	0.12	+0.1
2,968,657	+		DZA65_RS13830	0.12	+2.0
2,968,658	-		DZA65_RS13830	0.12	+0.6
2,968,658	-		DZA65_RS13830	0.12	+0.4
2,968,658	-		DZA65_RS13830	0.12	+0.0
2,968,658	-		DZA65_RS13830	0.12	+0.0
2,968,658	-		DZA65_RS13830	0.12	+0.8
2,968,658	-		DZA65_RS13830	0.12	+0.4
2,968,658	-		DZA65_RS13830	0.12	-0.0
2,968,658	-		DZA65_RS13830	0.12	-0.3
2,968,658	-		DZA65_RS13830	0.12	+0.6
2,968,783	-		DZA65_RS13830	0.36	-0.9
2,968,783	-		DZA65_RS13830	0.36	+3.2
2,968,783	-		DZA65_RS13830	0.36	+1.1
2,968,783	-		DZA65_RS13830	0.36	-1.0
2,968,783	-		DZA65_RS13830	0.36	-1.3
2,968,783	-		DZA65_RS13830	0.36	+0.2
2,968,783	-		DZA65_RS13830	0.36	-0.1
2,968,858	+		DZA65_RS13830	0.51	-0.5
2,968,868	-		DZA65_RS13830	0.53	-0.0
2,968,868	-		DZA65_RS13830	0.53	-0.1
2,968,899	-		DZA65_RS13830	0.59	-1.0
2,968,933	+		DZA65_RS13830	0.65	+1.1
2,968,933	+		DZA65_RS13830	0.65	+1.4
2,968,934	-		DZA65_RS13830	0.65	+2.0
2,968,934	-		DZA65_RS13830	0.65	-0.2
2,968,976	-		DZA65_RS13830	0.74	+0.7
2,968,976	-		DZA65_RS13830	0.74	-1.2
2,968,976	-		DZA65_RS13830	0.74	-0.0
2,968,976	-		DZA65_RS13830	0.74	+0.2
2,968,976	-		DZA65_RS13830	0.74	+0.4
2,969,125	+				+1.0
2,969,126	-				+2.0
2,969,126	-				-0.4
2,969,128	+				+1.2
2,969,128	+				+0.1
2,969,129	-				-0.3
2,969,129	-				+0.1
2,969,129	-				-0.6
2,969,129	-				-0.5
2,969,129	-				-0.4
2,969,138	-				-0.6
2,969,143	+				-0.6
2,969,143	+				+0.4
2,969,143	+				+0.9
2,969,143	+				-0.6
2,969,143	+				+0.4
2,969,143	+				-1.3
2,969,143	+				-0.3
2,969,143	+				-0.4
2,969,143	+				-0.9
2,969,143	+				-1.2
2,969,144	-				+1.4
2,969,144	-				-0.5
2,969,144	-				-0.0
2,969,144	-				-0.1
2,969,144	-				+0.1
2,969,144	-				+0.4
2,969,144	-				-0.4
2,969,144	-				-1.0
2,969,144	-				-1.0
2,969,144	-				-0.3
2,969,144	-				-1.1
2,969,144	-				+0.3
2,969,144	-				-0.2
2,969,144	-				+1.4
2,969,144	-				+0.6
2,969,147	+				-0.3
2,969,147	+				+0.2
2,969,147	+				-2.0
2,969,147	+				-0.6
2,969,147	+				+0.6
2,969,148	-				-2.2
2,969,148	-				+1.7
2,969,148	-				-0.3
2,969,148	-				+0.4
2,969,148	-				+0.4
2,969,148	-				-0.4
2,969,201	+				-1.0
2,969,267	+		DZA65_RS13835	0.14	-0.0
2,969,268	-		DZA65_RS13835	0.14	+1.0
2,969,286	+		DZA65_RS13835	0.17	+2.0
2,969,286	+		DZA65_RS13835	0.17	-0.2
2,969,290	-		DZA65_RS13835	0.17	+2.7
2,969,321	+		DZA65_RS13835	0.22	+1.1
2,969,321	+		DZA65_RS13835	0.22	+0.6
2,969,322	-		DZA65_RS13835	0.22	-0.1
2,969,378	+		DZA65_RS13835	0.29	-0.7
2,969,451	+		DZA65_RS13835	0.40	-0.1
2,969,467	+		DZA65_RS13835	0.42	+0.5
2,969,467	+		DZA65_RS13835	0.42	-2.0
2,969,468	-		DZA65_RS13835	0.42	+0.8
2,969,468	-		DZA65_RS13835	0.42	+1.7
2,969,468	-		DZA65_RS13835	0.42	+0.9
2,969,512	+		DZA65_RS13835	0.48	+0.4
2,969,513	-		DZA65_RS13835	0.48	-0.5
2,969,513	-		DZA65_RS13835	0.48	+0.5
2,969,513	-		DZA65_RS13835	0.48	-1.3
2,969,665	+		DZA65_RS13835	0.69	+0.4
2,969,665	+		DZA65_RS13835	0.69	-0.5
2,969,665	+		DZA65_RS13835	0.69	+0.3
2,969,666	-		DZA65_RS13835	0.69	+1.6
2,969,666	-		DZA65_RS13835	0.69	+0.8
2,969,666	-		DZA65_RS13835	0.69	-1.5
2,969,666	-		DZA65_RS13835	0.69	+0.9
2,969,666	-		DZA65_RS13835	0.69	-1.4
2,969,679	+		DZA65_RS13835	0.71	-0.5
2,969,679	+		DZA65_RS13835	0.71	+1.1
2,969,679	+		DZA65_RS13835	0.71	+1.4
2,969,679	+		DZA65_RS13835	0.71	-0.2
2,969,680	-		DZA65_RS13835	0.71	-1.0
2,969,680	-		DZA65_RS13835	0.71	+1.0
2,969,680	-		DZA65_RS13835	0.71	+0.4
2,969,680	-		DZA65_RS13835	0.71	-0.6
2,969,680	-		DZA65_RS13835	0.71	-0.4
2,969,712	+		DZA65_RS13835	0.76	+0.5
2,969,713	-		DZA65_RS13835	0.76	+0.3
2,969,796	-		DZA65_RS13835	0.87	+1.5
2,969,801	+		DZA65_RS13835	0.88	+0.9
2,969,802	-		DZA65_RS13835	0.88	-0.5
2,969,802	-		DZA65_RS13835	0.88	+0.2
2,969,802	-				+0.7
2,969,830	-				+0.6
2,969,830	-				+0.4
2,969,874	+				-0.1
2,969,874	+				-1.2
2,969,874	+				+1.0
2,969,875	-				+0.4
2,969,875	-				-0.1
2,969,875	-				-0.3
2,969,893	+				-1.6
2,969,893	+				-0.2
2,969,894	-				-0.2
2,969,894	-				+1.4
2,969,897	+				+3.7
2,969,897	+				-0.6
2,969,897	+				-0.6
2,969,897	+				+2.0
2,969,897	+				-2.0
2,969,897	+				-0.5
2,969,897	+				+0.1
2,969,897	+				-2.0
2,969,897	+				+0.8
2,969,898	-				-0.2
2,969,898	-				-1.1
2,969,902	-				-0.4
2,969,904	-				-0.5
2,969,909	+				-0.2
2,969,921	+				+0.8
2,969,927	+				+0.2
2,969,928	-				+1.3
2,969,935	+				-0.2
2,969,935	+				-2.0
2,969,936	-				-1.2
2,969,940	+				+0.1
2,969,940	+				-1.2
2,969,940	+				-0.1
2,969,940	+				-0.2
2,969,941	-				-0.4
2,969,941	-				-0.5
2,969,943	+				+1.5
2,969,943	+				+0.6
2,969,944	-				+1.0
2,969,944	-				-0.6
2,969,944	-				+0.0
2,969,960	+				+0.6
2,969,960	+				-0.0
2,969,961	-				-1.6
2,969,989	-				-1.2
2,970,015	-				-2.1
2,970,028	+				+0.1
2,970,033	+				+0.5
2,970,033	+				+1.2
2,970,034	-				-0.3
2,970,042	+				+0.7
2,970,059	+				-0.6
2,970,059	+				-0.3
2,970,059	+				-1.2
2,970,060	-				-0.9
2,970,078	+				-1.0
2,970,078	+				+1.0
2,970,078	+				-1.0
2,970,078	+				-0.5
2,970,079	-				-0.6
2,970,079	-				+1.4
2,970,079	-				-0.1
2,970,079	-				+2.0
2,970,079	-				-0.1
2,970,094	+				+0.4
2,970,107	+				-0.5
2,970,107	+				-0.1
2,970,108	-				+0.4