Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS09855

Experiment: M9+polygalacturonate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+polygalacturonate
2,076,017	+				-0.3
2,076,018	-				-0.9
2,076,049	-				+1.2
2,076,074	+				-0.2
2,076,074	+				+0.4
2,076,074	+				+0.4
2,076,075	-				+0.9
2,076,166	-				-1.6
2,076,166	-				+0.2
2,076,183	+		DZA65_RS09850	0.12	-0.0
2,076,249	+		DZA65_RS09850	0.19	-0.0
2,076,249	+		DZA65_RS09850	0.19	-2.2
2,076,249	+		DZA65_RS09850	0.19	-0.3
2,076,249	+		DZA65_RS09850	0.19	-0.1
2,076,249	+		DZA65_RS09850	0.19	-0.5
2,076,249	+		DZA65_RS09850	0.19	+0.4
2,076,250	-		DZA65_RS09850	0.20	+0.6
2,076,250	-		DZA65_RS09850	0.20	-1.6
2,076,250	-		DZA65_RS09850	0.20	-0.1
2,076,250	-		DZA65_RS09850	0.20	-2.8
2,076,250	-		DZA65_RS09850	0.20	+1.4
2,076,312	+		DZA65_RS09850	0.27	-0.9
2,076,312	+		DZA65_RS09850	0.27	+0.6
2,076,408	+		DZA65_RS09850	0.37	+0.0
2,076,409	-		DZA65_RS09850	0.38	+1.4
2,076,510	+		DZA65_RS09850	0.49	+0.1
2,076,510	+		DZA65_RS09850	0.49	-0.4
2,076,510	+		DZA65_RS09850	0.49	-0.3
2,076,510	+				-1.6
2,076,510	+		DZA65_RS09850	0.49	-0.9
2,076,510	+		DZA65_RS09850	0.49	+0.1
2,076,510	+		DZA65_RS09850	0.49	+0.8
2,076,510	+		DZA65_RS09850	0.49	+1.0
2,076,511	-		DZA65_RS09850	0.49	+0.7
2,076,511	-		DZA65_RS09850	0.49	-0.3
2,076,511	-		DZA65_RS09850	0.49	+0.1
2,076,511	-		DZA65_RS09850	0.49	-0.3
2,076,512	+		DZA65_RS09850	0.49	-0.6
2,076,620	+		DZA65_RS09850	0.61	-0.4
2,076,621	-		DZA65_RS09850	0.62	-0.1
2,076,621	-		DZA65_RS09850	0.62	+0.6
2,076,708	+		DZA65_RS09850	0.71	-1.0
2,076,708	+		DZA65_RS09850	0.71	+0.4
2,076,709	-		DZA65_RS09850	0.72	-1.8
2,076,729	+		DZA65_RS09850	0.74	-0.9
2,076,729	+		DZA65_RS09850	0.74	-1.4
2,076,729	+				-0.2
2,076,823	+		DZA65_RS09850	0.84	-0.4
2,076,823	+		DZA65_RS09850	0.84	-2.2
2,076,824	-		DZA65_RS09850	0.85	-0.4
2,076,861	+		DZA65_RS09850	0.89	-0.6
2,076,861	+		DZA65_RS09850	0.89	+1.2
2,076,861	+		DZA65_RS09850	0.89	+0.4
2,076,919	-				-1.0
2,077,088	+				-0.4
2,077,088	+				-2.2
2,077,089	-				-0.6
2,077,121	-				+0.3
2,077,121	-				+1.1
2,077,308	+		DZA65_RS09855	0.21	-0.2
2,077,309	-		DZA65_RS09855	0.21	-0.4
2,077,309	-		DZA65_RS09855	0.21	+0.5
2,077,334	-		DZA65_RS09855	0.23	-0.6
2,077,334	-		DZA65_RS09855	0.23	+0.4
2,077,334	-		DZA65_RS09855	0.23	-0.9
2,077,353	+		DZA65_RS09855	0.24	-1.8
2,077,354	-		DZA65_RS09855	0.24	+0.4
2,077,354	-		DZA65_RS09855	0.24	-0.1
2,077,354	-		DZA65_RS09855	0.24	-0.2
2,077,354	-		DZA65_RS09855	0.24	+0.2
2,077,362	+		DZA65_RS09855	0.25	+1.0
2,077,362	+		DZA65_RS09855	0.25	-0.4
2,077,362	+		DZA65_RS09855	0.25	-0.4
2,077,397	-		DZA65_RS09855	0.27	-0.5
2,077,475	-		DZA65_RS09855	0.32	+0.4
2,077,493	-		DZA65_RS09855	0.33	-0.6
2,077,502	-		DZA65_RS09855	0.34	-0.8
2,077,502	-		DZA65_RS09855	0.34	+0.1
2,077,502	-		DZA65_RS09855	0.34	-0.1
2,077,537	+		DZA65_RS09855	0.36	+0.4
2,077,719	-		DZA65_RS09855	0.49	-1.2
2,077,719	-		DZA65_RS09855	0.49	+1.4
2,077,819	+		DZA65_RS09855	0.56	-0.0
2,077,820	-		DZA65_RS09855	0.56	+0.4
2,077,820	-		DZA65_RS09855	0.56	-1.6
2,077,820	-		DZA65_RS09855	0.56	-0.4
2,077,820	-		DZA65_RS09855	0.56	-0.5
2,077,828	+		DZA65_RS09855	0.56	-0.2
2,077,828	+		DZA65_RS09855	0.56	+0.7
2,077,829	-		DZA65_RS09855	0.56	-0.0
2,077,874	-		DZA65_RS09855	0.59	-1.1
2,077,894	+		DZA65_RS09855	0.61	+0.5
2,077,894	+		DZA65_RS09855	0.61	+0.4
2,077,895	-		DZA65_RS09855	0.61	-0.6
2,077,979	+		DZA65_RS09855	0.67	-0.1
2,078,051	+		DZA65_RS09855	0.72	-1.9
2,078,064	+		DZA65_RS09855	0.72	+0.4
2,078,064	+		DZA65_RS09855	0.72	-0.1
2,078,065	-		DZA65_RS09855	0.72	-1.9
2,078,065	-		DZA65_RS09855	0.72	-1.5
2,078,124	+		DZA65_RS09855	0.76	-0.6
2,078,137	+		DZA65_RS09855	0.77	-0.6
2,078,137	+		DZA65_RS09855	0.77	-1.1
2,078,137	+		DZA65_RS09855	0.77	-1.6
2,078,138	-		DZA65_RS09855	0.77	-0.4
2,078,138	-		DZA65_RS09855	0.77	+0.6
2,078,138	-		DZA65_RS09855	0.77	-0.5
2,078,138	-		DZA65_RS09855	0.77	+0.8
2,078,138	-		DZA65_RS09855	0.77	-1.2
2,078,138	-		DZA65_RS09855	0.77	-1.5
2,078,138	-		DZA65_RS09855	0.77	-2.6
2,078,142	+		DZA65_RS09855	0.78	-1.9
2,078,142	+		DZA65_RS09855	0.78	-0.3
2,078,142	+		DZA65_RS09855	0.78	-0.4
2,078,143	-		DZA65_RS09855	0.78	+0.6
2,078,143	-		DZA65_RS09855	0.78	-0.0
2,078,163	-		DZA65_RS09855	0.79	-0.0
2,078,163	-		DZA65_RS09855	0.79	-0.6
2,078,197	+		DZA65_RS09855	0.81	+0.1
2,078,245	+		DZA65_RS09855	0.85	-0.8
2,078,245	+		DZA65_RS09855	0.85	-0.8
2,078,245	+		DZA65_RS09855	0.85	-0.6
2,078,245	+		DZA65_RS09855	0.85	+0.7
2,078,245	+		DZA65_RS09855	0.85	+0.4
2,078,245	+		DZA65_RS09855	0.85	-1.8
2,078,246	-		DZA65_RS09855	0.85	-0.0
2,078,246	-		DZA65_RS09855	0.85	-0.0
2,078,246	-		DZA65_RS09855	0.85	-1.1
2,078,248	+		DZA65_RS09855	0.85	-0.6
2,078,255	+		DZA65_RS09855	0.85	-1.2
2,078,255	+		DZA65_RS09855	0.85	-0.5
2,078,256	-		DZA65_RS09855	0.85	+0.1
2,078,256	-		DZA65_RS09855	0.85	+0.4
2,078,256	-		DZA65_RS09855	0.85	-0.1
2,078,256	-		DZA65_RS09855	0.85	-0.6
2,078,268	+		DZA65_RS09855	0.86	+0.4
2,078,288	-		DZA65_RS09855	0.88	-0.6
2,078,288	-		DZA65_RS09855	0.88	-0.8
2,078,288	-		DZA65_RS09855	0.88	+0.7
2,078,308	+		DZA65_RS09855	0.89	+1.4
2,078,308	+		DZA65_RS09855	0.89	+1.4
2,078,308	+		DZA65_RS09855	0.89	+0.7
2,078,308	+		DZA65_RS09855	0.89	+0.4
2,078,309	-		DZA65_RS09855	0.89	-2.2
2,078,309	-		DZA65_RS09855	0.89	+0.5
2,078,309	-		DZA65_RS09855	0.89	-0.9
2,078,319	+		DZA65_RS09855	0.90	-0.4
2,078,319	+		DZA65_RS09855	0.90	-0.6
2,078,319	+		DZA65_RS09855	0.90	+0.1
2,078,319	+		DZA65_RS09855	0.90	-0.4
2,078,320	-		DZA65_RS09855	0.90	-0.0
2,078,354	+				-0.2
2,078,422	+				-0.9
2,078,422	+				+0.7
2,078,422	+				-0.6
2,078,423	-				-0.5
2,078,541	+				+0.7
2,078,541	+				-1.2
2,078,542	-				+1.4
2,078,542	-				-0.2
2,078,542	-				+2.1
2,078,543	+				+0.5
2,078,543	+				+0.4
2,078,544	-				+0.4
2,078,544	-				-0.2
2,078,544	-				+1.1
2,078,544	-				+0.1
2,078,544	-				+2.0
2,078,544	-				+0.4
2,078,551	+				-0.7
2,078,552	-				-0.1
2,078,552	-				+0.7
2,078,552	-				-1.9
2,078,552	-				+0.4
2,078,552	-				+0.1
2,078,552	-				-0.6
2,078,552	-				-0.3
2,078,552	-				+0.1
2,078,552	-				-0.1
2,078,552	-				-0.1
2,078,612	-				+0.4
2,078,620	+				+1.0
2,078,620	+				+0.6
2,078,620	+				+0.4
2,078,620	+				-0.6
2,078,621	-				-0.3
2,078,621	-				-0.7
2,078,621	-				+0.1
2,078,621	-				-0.2
2,078,621	-				-0.3
2,078,621	-				+0.9
2,078,621	-				-0.7
2,078,625	+				+1.2
2,078,625	+				-2.2
2,078,625	+				-0.2
2,078,625	+				+0.7
2,078,625	+				-1.6
2,078,625	+				-0.3
2,078,625	+				+0.8
2,078,625	+				+0.1
2,078,625	+				+0.2
2,078,626	-				-0.6
2,078,626	-				-0.2
2,078,626	-				+0.6
2,078,626	-				+0.1
2,078,626	-				+0.2
2,078,626	-				+1.0
2,078,626	-				-1.2
2,078,628	+				-0.0
2,078,628	+				+2.0
2,078,628	+				-0.6
2,078,628	+				+0.2
2,078,629	-				+0.5
2,078,629	-				+0.8
2,078,629	-				-0.4
2,078,631	-				-0.8
2,078,708	+				+0.4
2,078,708	+				+0.7
2,078,708	+				+0.6
2,078,708	+				+1.7
2,078,708	+				-0.9
2,078,708	+				+0.4
2,078,708	+				-0.9
2,078,708	+				-1.2
2,078,708	+				+0.4
2,078,708	+				+0.1
2,078,708	+				-0.4
2,078,708	+				-1.1
2,078,708	+				-1.4
2,078,708	+				-1.5
2,078,709	-				-0.0
2,078,709	-				+0.1
2,078,709	-				+0.5
2,078,709	-				+0.4
2,078,709	-				-0.4
2,078,709	-				+0.4
2,078,709	-				-0.1
2,078,790	+				-0.6
2,078,791	-				+1.0
2,078,791	-				-0.9
2,078,791	-				-0.4
2,078,791	-				-1.6
2,078,865	-				-3.2
2,078,866	+				+0.6
2,078,866	+				+0.7
2,078,866	+				+0.2
2,078,866	+				+0.4
2,078,866	+				-0.5
2,078,866	+				-0.0
2,078,866	+				-0.6
2,078,866	+				+0.9
2,078,866	+				+0.4
2,078,867	-		DZA65_RS09860	0.10	-1.9
2,078,867	-		DZA65_RS09860	0.10	+0.1
2,078,867	-		DZA65_RS09860	0.10	-0.6
2,078,867	-		DZA65_RS09860	0.10	+1.4
2,078,867	-		DZA65_RS09860	0.10	-0.9
2,078,867	-				-1.2
2,078,883	-		DZA65_RS09860	0.12	-0.3
2,078,891	+		DZA65_RS09860	0.12	-0.3
2,078,892	-				-1.2
2,078,892	-		DZA65_RS09860	0.12	-0.2
2,079,077	+		DZA65_RS09860	0.31	-0.6
2,079,077	+		DZA65_RS09860	0.31	+0.1
2,079,077	+		DZA65_RS09860	0.31	-0.9
2,079,118	-		DZA65_RS09860	0.35	-0.6
2,079,118	-		DZA65_RS09860	0.35	-0.3
2,079,118	-		DZA65_RS09860	0.35	+0.4
2,079,128	+		DZA65_RS09860	0.36	+0.8
2,079,128	+		DZA65_RS09860	0.36	+0.5
2,079,128	+		DZA65_RS09860	0.36	-0.9
2,079,128	+		DZA65_RS09860	0.36	+2.4
2,079,128	+		DZA65_RS09860	0.36	-0.2
2,079,128	+		DZA65_RS09860	0.36	-0.2
2,079,128	+		DZA65_RS09860	0.36	-0.1
2,079,128	+		DZA65_RS09860	0.36	+0.9
2,079,128	+		DZA65_RS09860	0.36	+0.0
2,079,129	-				-0.9
2,079,129	-		DZA65_RS09860	0.36	+1.4
2,079,129	-		DZA65_RS09860	0.36	+0.4
2,079,129	-		DZA65_RS09860	0.36	-0.3
2,079,129	-		DZA65_RS09860	0.36	-0.9
2,079,129	-		DZA65_RS09860	0.36	+0.4
2,079,130	+		DZA65_RS09860	0.36	+0.2
2,079,130	+		DZA65_RS09860	0.36	-0.9
2,079,130	+		DZA65_RS09860	0.36	+0.5
2,079,130	+		DZA65_RS09860	0.36	+0.7
2,079,130	+		DZA65_RS09860	0.36	+0.2
2,079,130	+		DZA65_RS09860	0.36	+0.9
2,079,130	+		DZA65_RS09860	0.36	-1.6
2,079,130	+		DZA65_RS09860	0.36	-0.5
2,079,130	+		DZA65_RS09860	0.36	-0.6
2,079,130	+		DZA65_RS09860	0.36	-0.0
2,079,130	+		DZA65_RS09860	0.36	+0.2
2,079,130	+		DZA65_RS09860	0.36	+0.4
2,079,130	+		DZA65_RS09860	0.36	+0.4
2,079,130	+		DZA65_RS09860	0.36	-0.5
2,079,131	-		DZA65_RS09860	0.36	+0.8
2,079,131	-		DZA65_RS09860	0.36	-1.2
2,079,131	-		DZA65_RS09860	0.36	-0.8
2,079,131	-		DZA65_RS09860	0.36	-0.6
2,079,131	-		DZA65_RS09860	0.36	+0.5
2,079,131	-		DZA65_RS09860	0.36	-0.6
2,079,131	-		DZA65_RS09860	0.36	+0.4
2,079,131	-		DZA65_RS09860	0.36	-0.3
2,079,131	-		DZA65_RS09860	0.36	+0.8
2,079,131	-		DZA65_RS09860	0.36	+0.4
2,079,131	-		DZA65_RS09860	0.36	+0.4
2,079,131	-		DZA65_RS09860	0.36	-2.8
2,079,131	-		DZA65_RS09860	0.36	-1.5
2,079,131	-		DZA65_RS09860	0.36	-1.0
2,079,131	-		DZA65_RS09860	0.36	-0.3
2,079,405	-		DZA65_RS09860	0.63	+0.7
2,079,434	-		DZA65_RS09860	0.66	+0.6