Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS07330

Experiment: M9+polygalacturonate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+polygalacturonate
1,522,426	-		DZA65_RS07320	0.72	-1.1
1,522,437	-		DZA65_RS07320	0.74	+2.5
1,522,437	-		DZA65_RS07320	0.74	-1.2
1,522,437	-		DZA65_RS07320	0.74	-1.5
1,522,504	+		DZA65_RS07320	0.88	+0.1
1,522,505	-		DZA65_RS07320	0.88	-0.6
1,522,507	-		DZA65_RS07320	0.88	-0.3
1,522,511	-		DZA65_RS07320	0.89	-0.1
1,522,624	-				-1.1
1,522,648	-				+0.9
1,522,651	+				-0.2
1,522,651	+				+0.5
1,522,652	-				-0.5
1,522,707	+				-0.2
1,522,708	-				-0.5
1,522,708	-				-0.1
1,522,733	+				+0.2
1,522,796	-				-1.1
1,522,854	+				+0.3
1,522,855	-				+0.3
1,522,856	+				+1.0
1,522,856	+				-0.0
1,522,873	+				+0.1
1,522,938	-				-0.5
1,522,991	+				-0.0
1,522,996	-				+0.5
1,522,999	-				-0.3
1,523,060	+				-1.5
1,523,060	+				+0.7
1,523,075	-				+0.5
1,523,084	+				-0.1
1,523,128	-				-1.8
1,523,134	-				+0.5
1,523,204	-				-1.5
1,523,229	+				+0.1
1,523,279	-				+0.4
1,523,359	+				+0.3
1,523,377	+				+0.0
1,523,378	-				+0.0
1,523,422	+				+1.0
1,523,507	-				-0.6
1,523,507	-				+0.4
1,523,653	+				+0.5
1,523,775	+				-1.1
1,523,777	+				+0.9
1,523,777	+				+0.1
1,523,780	+				+2.3
1,524,076	+		DZA65_RS07330	0.12	-0.8
1,524,146	+		DZA65_RS07330	0.14	-0.1
1,524,147	-		DZA65_RS07330	0.14	-1.8
1,524,164	+		DZA65_RS07330	0.14	+0.5
1,524,165	-		DZA65_RS07330	0.14	-1.1
1,524,175	-		DZA65_RS07330	0.14	+0.4
1,524,281	-		DZA65_RS07330	0.16	+0.9
1,524,318	+		DZA65_RS07330	0.17	+0.5
1,524,322	+		DZA65_RS07330	0.17	+0.4
1,524,322	+		DZA65_RS07330	0.17	-1.8
1,524,322	+		DZA65_RS07330	0.17	-0.5
1,524,322	+		DZA65_RS07330	0.17	-0.5
1,524,323	-		DZA65_RS07330	0.17	-1.0
1,524,323	-		DZA65_RS07330	0.17	-0.0
1,524,323	-		DZA65_RS07330	0.17	+0.1
1,524,323	-		DZA65_RS07330	0.17	-0.7
1,524,323	-		DZA65_RS07330	0.17	+0.1
1,524,324	+		DZA65_RS07330	0.17	-0.3
1,524,351	+		DZA65_RS07330	0.17	+1.6
1,524,366	+		DZA65_RS07330	0.18	+1.1
1,524,367	-		DZA65_RS07330	0.18	+0.8
1,524,413	-		DZA65_RS07330	0.18	+1.0
1,524,413	-		DZA65_RS07330	0.18	-0.8
1,524,413	-		DZA65_RS07330	0.18	+0.4
1,524,434	-		DZA65_RS07330	0.19	-0.2
1,524,505	-		DZA65_RS07330	0.20	+1.1
1,524,509	-				-1.1
1,524,514	+		DZA65_RS07330	0.20	+0.8
1,524,555	+		DZA65_RS07330	0.21	+0.6
1,524,555	+		DZA65_RS07330	0.21	-0.1
1,524,555	+		DZA65_RS07330	0.21	+0.3
1,524,555	+		DZA65_RS07330	0.21	+0.5
1,524,555	+		DZA65_RS07330	0.21	+0.9
1,524,556	-		DZA65_RS07330	0.21	+0.2
1,524,556	-		DZA65_RS07330	0.21	+0.8
1,524,559	+		DZA65_RS07330	0.21	+1.2
1,524,559	+		DZA65_RS07330	0.21	-0.0
1,524,560	-		DZA65_RS07330	0.21	-0.9
1,524,562	+		DZA65_RS07330	0.21	+0.8
1,524,562	+		DZA65_RS07330	0.21	+0.3
1,524,565	+		DZA65_RS07330	0.21	+0.1
1,524,566	-		DZA65_RS07330	0.21	+1.2
1,524,566	-		DZA65_RS07330	0.21	-0.3
1,524,575	-		DZA65_RS07330	0.21	+0.1
1,524,656	-		DZA65_RS07330	0.23	-0.1
1,524,782	-		DZA65_RS07330	0.25	-0.5
1,524,797	-		DZA65_RS07330	0.25	+0.5
1,524,853	+		DZA65_RS07330	0.26	-1.5
1,525,030	+		DZA65_RS07330	0.30	+0.8
1,525,033	-		DZA65_RS07330	0.30	+0.4
1,525,150	+		DZA65_RS07330	0.32	+1.9
1,525,194	+		DZA65_RS07330	0.33	+0.2
1,525,259	-		DZA65_RS07330	0.34	-1.5
1,525,261	+		DZA65_RS07330	0.34	+2.1
1,525,328	-		DZA65_RS07330	0.35	-1.2
1,525,471	+		DZA65_RS07330	0.38	-0.6
1,525,543	-		DZA65_RS07330	0.39	+0.6
1,525,580	-		DZA65_RS07330	0.40	+0.5
1,525,632	+		DZA65_RS07330	0.41	-0.6
1,525,651	-		DZA65_RS07330	0.41	+0.1
1,525,659	+		DZA65_RS07330	0.41	+0.0
1,525,847	-		DZA65_RS07330	0.44	-0.9
1,525,861	-		DZA65_RS07330	0.45	-0.2
1,525,903	+		DZA65_RS07330	0.45	-0.2
1,525,995	+		DZA65_RS07330	0.47	+0.3
1,525,996	-		DZA65_RS07330	0.47	-1.0
1,525,996	-		DZA65_RS07330	0.47	+2.2
1,525,996	-		DZA65_RS07330	0.47	-0.1
1,526,049	-		DZA65_RS07330	0.48	+0.0
1,526,063	+		DZA65_RS07330	0.48	+0.5
1,526,131	+		DZA65_RS07330	0.50	-0.2
1,526,135	+		DZA65_RS07330	0.50	+0.1
1,526,135	+		DZA65_RS07330	0.50	-0.4
1,526,135	+		DZA65_RS07330	0.50	+0.8
1,526,237	+		DZA65_RS07330	0.52	+0.9
1,526,315	+		DZA65_RS07330	0.53	-0.6
1,526,315	+		DZA65_RS07330	0.53	-0.5
1,526,338	+		DZA65_RS07330	0.53	+0.5
1,526,353	-		DZA65_RS07330	0.54	-0.5
1,526,382	+		DZA65_RS07330	0.54	+0.8
1,526,442	+		DZA65_RS07330	0.55	-0.1
1,526,587	+		DZA65_RS07330	0.58	-0.1
1,526,618	+		DZA65_RS07330	0.58	+0.7
1,526,691	-		DZA65_RS07330	0.60	+1.1
1,526,776	-		DZA65_RS07330	0.61	+2.1
1,526,797	-		DZA65_RS07330	0.62	-0.0
1,526,797	-		DZA65_RS07330	0.62	+1.0
1,526,797	-		DZA65_RS07330	0.62	-0.5
1,526,797	-		DZA65_RS07330	0.62	+1.0
1,526,829	+		DZA65_RS07330	0.62	+0.9
1,526,829	+		DZA65_RS07330	0.62	-1.1
1,526,830	-		DZA65_RS07330	0.62	+3.1
1,526,868	+		DZA65_RS07330	0.63	+0.8
1,526,869	-		DZA65_RS07330	0.63	-0.3
1,526,905	+		DZA65_RS07330	0.64	+0.4
1,526,917	+		DZA65_RS07330	0.64	+0.7
1,526,917	+		DZA65_RS07330	0.64	-0.9
1,526,917	+		DZA65_RS07330	0.64	+0.2
1,526,918	-		DZA65_RS07330	0.64	-0.2
1,526,918	-		DZA65_RS07330	0.64	+0.2
1,526,927	-		DZA65_RS07330	0.64	-1.1
1,526,940	+		DZA65_RS07330	0.64	+0.5
1,526,940	+		DZA65_RS07330	0.64	+1.7
1,526,941	-		DZA65_RS07330	0.64	+0.4
1,526,956	+		DZA65_RS07330	0.65	+0.6
1,526,977	+		DZA65_RS07330	0.65	-0.7
1,526,977	+		DZA65_RS07330	0.65	+0.4
1,526,978	-		DZA65_RS07330	0.65	+0.2
1,526,978	-		DZA65_RS07330	0.65	-0.3
1,526,978	-		DZA65_RS07330	0.65	-1.8
1,527,046	-		DZA65_RS07330	0.66	-1.9
1,527,066	+		DZA65_RS07330	0.67	-1.2
1,527,076	-		DZA65_RS07330	0.67	+0.8
1,527,084	+		DZA65_RS07330	0.67	-0.8
1,527,104	-		DZA65_RS07330	0.67	-0.2
1,527,112	-		DZA65_RS07330	0.67	-2.3
1,527,117	+		DZA65_RS07330	0.67	+0.2
1,527,117	+		DZA65_RS07330	0.67	+0.0
1,527,117	+		DZA65_RS07330	0.67	+0.5
1,527,138	+		DZA65_RS07330	0.68	-0.5
1,527,228	+		DZA65_RS07330	0.69	-0.3
1,527,228	+		DZA65_RS07330	0.69	-0.8
1,527,228	+		DZA65_RS07330	0.69	+0.5
1,527,229	-		DZA65_RS07330	0.70	-0.5
1,527,229	-		DZA65_RS07330	0.70	-0.3
1,527,229	-		DZA65_RS07330	0.70	-0.3
1,527,229	-		DZA65_RS07330	0.70	+0.2
1,527,229	-		DZA65_RS07330	0.70	-0.4
1,527,229	-		DZA65_RS07330	0.70	-1.5
1,527,282	-		DZA65_RS07330	0.70	+1.2
1,527,282	-		DZA65_RS07330	0.70	+1.1
1,527,344	+		DZA65_RS07330	0.72	-1.5
1,527,344	+		DZA65_RS07330	0.72	-0.5
1,527,344	+		DZA65_RS07330	0.72	-0.7
1,527,344	+		DZA65_RS07330	0.72	+2.5
1,527,344	+		DZA65_RS07330	0.72	-1.5
1,527,344	+		DZA65_RS07330	0.72	-0.9
1,527,344	+		DZA65_RS07330	0.72	+0.8
1,527,345	-		DZA65_RS07330	0.72	+0.5
1,527,345	-		DZA65_RS07330	0.72	-0.8
1,527,345	-		DZA65_RS07330	0.72	-2.1
1,527,345	-		DZA65_RS07330	0.72	+0.2
1,527,345	-				+0.2
1,527,346	+		DZA65_RS07330	0.72	-0.3
1,527,346	+		DZA65_RS07330	0.72	-0.1
1,527,346	+		DZA65_RS07330	0.72	-0.7
1,527,346	+		DZA65_RS07330	0.72	+0.1
1,527,347	-				-1.1
1,527,347	-		DZA65_RS07330	0.72	+0.3
1,527,362	+		DZA65_RS07330	0.72	-0.5
1,527,363	-		DZA65_RS07330	0.72	-0.7
1,527,363	-		DZA65_RS07330	0.72	-0.3
1,527,364	+		DZA65_RS07330	0.72	+0.5
1,527,364	+		DZA65_RS07330	0.72	+1.1
1,527,364	+		DZA65_RS07330	0.72	+0.5
1,527,364	+		DZA65_RS07330	0.72	+0.2
1,527,364	+		DZA65_RS07330	0.72	+0.6
1,527,364	+		DZA65_RS07330	0.72	+0.2
1,527,364	+		DZA65_RS07330	0.72	-0.2
1,527,364	+		DZA65_RS07330	0.72	-0.2
1,527,365	-		DZA65_RS07330	0.72	-1.3
1,527,365	-		DZA65_RS07330	0.72	-0.1
1,527,365	-		DZA65_RS07330	0.72	-1.4
1,527,365	-		DZA65_RS07330	0.72	+0.2
1,527,365	-		DZA65_RS07330	0.72	-0.8
1,527,365	-		DZA65_RS07330	0.72	-0.5
1,527,365	-		DZA65_RS07330	0.72	-0.8
1,527,365	-		DZA65_RS07330	0.72	-0.1
1,527,435	+		DZA65_RS07330	0.73	+0.1
1,527,435	+		DZA65_RS07330	0.73	-0.1
1,527,436	-		DZA65_RS07330	0.73	-0.8
1,527,436	-		DZA65_RS07330	0.73	+0.9
1,527,436	-		DZA65_RS07330	0.73	-0.2
1,527,485	+		DZA65_RS07330	0.74	+0.5
1,527,508	-		DZA65_RS07330	0.75	-0.3
1,527,523	+		DZA65_RS07330	0.75	+0.1
1,527,541	-		DZA65_RS07330	0.75	-0.7
1,527,541	-		DZA65_RS07330	0.75	-1.6
1,527,541	-		DZA65_RS07330	0.75	-0.5
1,527,541	-		DZA65_RS07330	0.75	-0.2
1,527,558	+		DZA65_RS07330	0.75	-1.3
1,527,558	+		DZA65_RS07330	0.75	-0.5
1,527,565	+		DZA65_RS07330	0.76	-1.5
1,527,566	-		DZA65_RS07330	0.76	+0.3
1,527,570	+		DZA65_RS07330	0.76	+0.6
1,527,570	+		DZA65_RS07330	0.76	-0.2
1,527,571	-		DZA65_RS07330	0.76	-0.3
1,527,664	+		DZA65_RS07330	0.77	-0.4
1,527,668	-		DZA65_RS07330	0.77	+2.3
1,527,683	+		DZA65_RS07330	0.78	-0.1
1,527,683	+		DZA65_RS07330	0.78	+0.1
1,527,704	+		DZA65_RS07330	0.78	+0.6
1,527,704	+		DZA65_RS07330	0.78	-1.2
1,527,705	-		DZA65_RS07330	0.78	-0.8
1,527,706	+		DZA65_RS07330	0.78	+1.1
1,527,706	+		DZA65_RS07330	0.78	+2.5
1,527,706	+		DZA65_RS07330	0.78	+1.1
1,527,797	+		DZA65_RS07330	0.80	+0.8
1,527,797	+		DZA65_RS07330	0.80	+0.3
1,527,797	+		DZA65_RS07330	0.80	-0.0
1,527,798	-		DZA65_RS07330	0.80	+0.4
1,527,798	-		DZA65_RS07330	0.80	+0.2
1,527,798	-		DZA65_RS07330	0.80	-0.7
1,527,805	+		DZA65_RS07330	0.80	+0.3
1,527,806	-		DZA65_RS07330	0.80	+0.1
1,527,852	+		DZA65_RS07330	0.81	+0.8
1,527,853	-		DZA65_RS07330	0.81	+1.5
1,527,853	-		DZA65_RS07330	0.81	+0.8
1,527,862	+		DZA65_RS07330	0.81	-0.2
1,527,867	+		DZA65_RS07330	0.81	-1.8
1,527,878	+		DZA65_RS07330	0.81	-0.7
1,527,932	-		DZA65_RS07330	0.82	+1.1
1,527,936	+		DZA65_RS07330	0.82	+0.3
1,527,936	+				-0.9
1,527,937	-		DZA65_RS07330	0.82	+0.4
1,527,951	+		DZA65_RS07330	0.83	-0.2
1,528,000	+		DZA65_RS07330	0.83	-0.2
1,528,001	-		DZA65_RS07330	0.84	+0.9
1,528,017	+		DZA65_RS07330	0.84	-0.5
1,528,017	+		DZA65_RS07330	0.84	-0.3
1,528,023	+		DZA65_RS07330	0.84	-2.3
1,528,024	-		DZA65_RS07330	0.84	+1.1
1,528,056	-		DZA65_RS07330	0.85	-1.1
1,528,056	-		DZA65_RS07330	0.85	-0.5
1,528,060	+		DZA65_RS07330	0.85	-0.6
1,528,060	+		DZA65_RS07330	0.85	-1.3
1,528,060	+		DZA65_RS07330	0.85	+0.6
1,528,061	-		DZA65_RS07330	0.85	-0.9
1,528,061	-		DZA65_RS07330	0.85	+0.3
1,528,061	-		DZA65_RS07330	0.85	-0.5
1,528,061	-		DZA65_RS07330	0.85	+0.8
1,528,061	-		DZA65_RS07330	0.85	-0.5
1,528,061	-		DZA65_RS07330	0.85	-1.1
1,528,062	+		DZA65_RS07330	0.85	+0.4
1,528,062	+		DZA65_RS07330	0.85	-1.1
1,528,062	+		DZA65_RS07330	0.85	+0.5
1,528,062	+		DZA65_RS07330	0.85	+1.2
1,528,062	+		DZA65_RS07330	0.85	-0.7
1,528,062	+		DZA65_RS07330	0.85	-0.1
1,528,062	+		DZA65_RS07330	0.85	+0.7
1,528,063	-		DZA65_RS07330	0.85	-0.9
1,528,063	-		DZA65_RS07330	0.85	+0.5
1,528,063	-		DZA65_RS07330	0.85	-0.4
1,528,063	-		DZA65_RS07330	0.85	+1.1
1,528,066	+		DZA65_RS07330	0.85	-0.5
1,528,066	+		DZA65_RS07330	0.85	+0.1
1,528,066	+		DZA65_RS07330	0.85	+0.4
1,528,066	+		DZA65_RS07330	0.85	-0.7
1,528,066	+		DZA65_RS07330	0.85	+0.5
1,528,067	-		DZA65_RS07330	0.85	-2.3
1,528,067	-		DZA65_RS07330	0.85	+0.3
1,528,067	-		DZA65_RS07330	0.85	+0.5
1,528,067	-		DZA65_RS07330	0.85	+0.5
1,528,081	+		DZA65_RS07330	0.85	-0.5
1,528,081	+		DZA65_RS07330	0.85	+1.1
1,528,081	+		DZA65_RS07330	0.85	-0.8
1,528,081	+		DZA65_RS07330	0.85	+0.7
1,528,088	+		DZA65_RS07330	0.85	-0.5
1,528,088	+		DZA65_RS07330	0.85	-0.2
1,528,088	+		DZA65_RS07330	0.85	-0.5
1,528,089	-		DZA65_RS07330	0.85	-1.5
1,528,089	-		DZA65_RS07330	0.85	-0.2
1,528,089	-		DZA65_RS07330	0.85	+1.5
1,528,125	+				-0.5
1,528,125	+		DZA65_RS07330	0.86	-1.1
1,528,125	+		DZA65_RS07330	0.86	+0.2
1,528,126	-				-1.8
1,528,126	-		DZA65_RS07330	0.86	+2.3
1,528,177	+		DZA65_RS07330	0.87	-1.0
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