Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS22415

Experiment: M9+polygalacturonate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+polygalacturonate
4,846,668	+				-1.0
4,846,906	+		DZA65_RS22410	0.44	-1.0
4,847,031	+				+1.6
4,847,031	+		DZA65_RS22410	0.74	-1.8
4,847,031	+		DZA65_RS22410	0.74	-0.5
4,847,031	+		DZA65_RS22410	0.74	-1.1
4,847,031	+		DZA65_RS22410	0.74	-1.1
4,847,032	-		DZA65_RS22410	0.75	-0.3
4,847,032	-		DZA65_RS22410	0.75	-1.3
4,847,040	+		DZA65_RS22410	0.77	-1.6
4,847,059	+		DZA65_RS22410	0.81	-0.3
4,847,060	-		DZA65_RS22410	0.81	-0.2
4,847,134	+				+0.0
4,847,134	+				-1.5
4,847,134	+				-1.3
4,847,134	+				+0.6
4,847,134	+				-0.1
4,847,134	+				+0.0
4,847,135	-				-1.1
4,847,135	-				+0.0
4,847,149	+				+0.3
4,847,149	+				+1.0
4,847,149	+				-1.3
4,847,149	+				-2.0
4,847,150	-				-1.3
4,847,150	-				+0.2
4,847,150	-				-0.9
4,847,150	-				+0.0
4,847,150	-				-0.2
4,847,150	-				+0.0
4,847,167	+				+0.4
4,847,167	+				-0.4
4,847,167	+				+1.4
4,847,167	+				-1.2
4,847,167	+				-2.1
4,847,167	+				+0.0
4,847,168	-				-0.8
4,847,168	-				-0.5
4,847,168	-				-0.5
4,847,168	-				+0.5
4,847,168	-				-1.0
4,847,168	-				-2.1
4,847,168	-				-0.3
4,847,184	+				+1.2
4,847,184	+				+0.5
4,847,185	-				+2.6
4,847,274	+				+0.2
4,847,274	+				+1.5
4,847,275	-				+0.1
4,847,275	-				+1.0
4,847,275	-				-2.0
4,847,317	+				+0.3
4,847,317	+				-0.3
4,847,317	+				+2.3
4,847,318	-				+0.3
4,847,318	-				+0.0
4,847,364	+				-1.3
4,847,364	+				+0.2
4,847,365	-				+0.0
4,847,424	+				-1.8
4,847,424	+				+0.6
4,847,424	+				+2.0
4,847,424	+				-0.5
4,847,424	+				+0.6
4,847,424	+				-0.3
4,847,424	+				-1.0
4,847,424	+				+1.0
4,847,424	+				+1.2
4,847,425	-				+0.0
4,847,425	-				+1.0
4,847,425	-				-1.5
4,847,425	-				-0.3
4,847,425	-				-1.5
4,847,425	-				+0.7
4,847,425	-				-1.8
4,847,425	-				-0.7
4,847,425	-				+0.2
4,847,425	-				-2.0
4,847,425	-				+1.4
4,847,425	-				+1.0
4,847,425	-				-0.9
4,847,425	-				-0.5
4,847,425	-				-0.8
4,847,463	+				-0.7
4,847,463	+				+0.2
4,847,463	+				-0.2
4,847,463	+				+2.6
4,847,463	+				-1.7
4,847,463	+				+0.5
4,847,463	+				+1.5
4,847,463	+				-1.0
4,847,463	+				-0.6
4,847,463	+				-0.5
4,847,464	-				+1.0
4,847,464	-				+0.5
4,847,464	-				+1.6
4,847,464	-				-0.3
4,847,464	-				-1.8
4,847,464	-				+0.0
4,847,464	-				-1.7
4,847,479	+				-0.1
4,847,506	+		DZA65_RS22415	0.10	+0.0
4,847,506	+		DZA65_RS22415	0.10	-2.7
4,847,507	-		DZA65_RS22415	0.10	-0.5
4,847,507	-		DZA65_RS22415	0.10	+0.4
4,847,526	+		DZA65_RS22415	0.11	-1.3
4,847,526	+		DZA65_RS22415	0.11	-1.4
4,847,527	-		DZA65_RS22415	0.11	-0.1
4,847,527	-		DZA65_RS22415	0.11	-0.8
4,847,529	+		DZA65_RS22415	0.11	+0.9
4,847,529	+		DZA65_RS22415	0.11	+0.6
4,847,529	+				+0.0
4,847,529	+		DZA65_RS22415	0.11	+0.0
4,847,530	-		DZA65_RS22415	0.11	+0.0
4,847,549	-		DZA65_RS22415	0.12	-0.5
4,847,653	+		DZA65_RS22415	0.17	-1.3
4,847,653	+		DZA65_RS22415	0.17	+1.5
4,847,653	+		DZA65_RS22415	0.17	+0.1
4,847,653	+		DZA65_RS22415	0.17	+0.6
4,847,653	+		DZA65_RS22415	0.17	+0.3
4,847,653	+		DZA65_RS22415	0.17	-0.7
4,847,654	-		DZA65_RS22415	0.17	+0.0
4,847,654	-		DZA65_RS22415	0.17	+1.0
4,847,654	-		DZA65_RS22415	0.17	-0.2
4,847,654	-		DZA65_RS22415	0.17	-0.5
4,847,654	-		DZA65_RS22415	0.17	-0.1
4,847,698	+				+1.0
4,847,699	-		DZA65_RS22415	0.19	+1.8
4,847,699	-		DZA65_RS22415	0.19	-0.5
4,847,699	-		DZA65_RS22415	0.19	-1.5
4,847,833	+		DZA65_RS22415	0.25	+0.6
4,847,927	-		DZA65_RS22415	0.29	-3.5
4,848,081	+		DZA65_RS22415	0.36	+1.0
4,848,111	-		DZA65_RS22415	0.38	+0.0
4,848,142	+		DZA65_RS22415	0.39	+1.6
4,848,142	+		DZA65_RS22415	0.39	-0.4
4,848,143	-		DZA65_RS22415	0.39	-0.1
4,848,179	+		DZA65_RS22415	0.41	+0.0
4,848,180	-		DZA65_RS22415	0.41	+1.0
4,848,192	+		DZA65_RS22415	0.41	+0.0
4,848,230	+		DZA65_RS22415	0.43	-0.1
4,848,309	+		DZA65_RS22415	0.47	+0.2
4,848,309	+		DZA65_RS22415	0.47	+0.2
4,848,309	+		DZA65_RS22415	0.47	-1.3
4,848,309	+		DZA65_RS22415	0.47	-0.2
4,848,310	-		DZA65_RS22415	0.47	+0.5
4,848,310	-		DZA65_RS22415	0.47	+0.8
4,848,310	-		DZA65_RS22415	0.47	-0.3
4,848,310	-		DZA65_RS22415	0.47	-1.0
4,848,310	-		DZA65_RS22415	0.47	-1.1
4,848,310	-		DZA65_RS22415	0.47	-0.5
4,848,310	-		DZA65_RS22415	0.47	+1.5
4,848,310	-		DZA65_RS22415	0.47	-1.6
4,848,396	+		DZA65_RS22415	0.51	+1.0
4,848,396	+		DZA65_RS22415	0.51	-1.1
4,848,396	+		DZA65_RS22415	0.51	+0.8
4,848,397	-		DZA65_RS22415	0.51	-0.7
4,848,397	-		DZA65_RS22415	0.51	+0.9
4,848,397	-		DZA65_RS22415	0.51	-0.3
4,848,397	-		DZA65_RS22415	0.51	+0.6
4,848,397	-		DZA65_RS22415	0.51	+0.9
4,848,397	-		DZA65_RS22415	0.51	-1.1
4,848,450	+		DZA65_RS22415	0.53	-0.1
4,848,451	-		DZA65_RS22415	0.53	-0.1
4,848,520	+		DZA65_RS22415	0.56	-0.2
4,848,522	+		DZA65_RS22415	0.56	-0.5
4,848,522	+		DZA65_RS22415	0.56	-0.1
4,848,522	+		DZA65_RS22415	0.56	+2.6
4,848,522	+		DZA65_RS22415	0.56	-0.7
4,848,522	+		DZA65_RS22415	0.56	-0.2
4,848,522	+		DZA65_RS22415	0.56	+1.0
4,848,522	+		DZA65_RS22415	0.56	-0.5
4,848,522	+		DZA65_RS22415	0.56	+0.6
4,848,522	+		DZA65_RS22415	0.56	-0.8
4,848,522	+		DZA65_RS22415	0.56	+0.4
4,848,523	-		DZA65_RS22415	0.56	+0.0
4,848,523	-		DZA65_RS22415	0.56	-0.5
4,848,523	-		DZA65_RS22415	0.56	-0.8
4,848,523	-		DZA65_RS22415	0.56	+0.4
4,848,523	-		DZA65_RS22415	0.56	-1.4
4,848,523	-		DZA65_RS22415	0.56	-0.4
4,848,523	-				-0.5
4,848,523	-		DZA65_RS22415	0.56	+0.4
4,848,523	-		DZA65_RS22415	0.56	+1.0
4,848,546	+		DZA65_RS22415	0.57	-0.5
4,848,546	+		DZA65_RS22415	0.57	-0.5
4,848,578	+		DZA65_RS22415	0.59	+0.5
4,848,578	+		DZA65_RS22415	0.59	-0.3
4,848,579	-		DZA65_RS22415	0.59	-0.1
4,848,579	-		DZA65_RS22415	0.59	+0.6
4,848,579	-		DZA65_RS22415	0.59	+0.0
4,848,579	-		DZA65_RS22415	0.59	+0.8
4,848,579	-		DZA65_RS22415	0.59	+1.7
4,848,579	-		DZA65_RS22415	0.59	-0.1
4,848,579	-		DZA65_RS22415	0.59	-1.8
4,848,662	-		DZA65_RS22415	0.63	-0.2
4,848,671	+		DZA65_RS22415	0.63	-1.5
4,848,671	+		DZA65_RS22415	0.63	+1.0
4,848,671	+		DZA65_RS22415	0.63	+0.3
4,848,705	+		DZA65_RS22415	0.65	+0.2
4,848,705	+		DZA65_RS22415	0.65	+0.6
4,848,705	+		DZA65_RS22415	0.65	+1.6
4,848,705	+		DZA65_RS22415	0.65	-1.2
4,848,705	+		DZA65_RS22415	0.65	+1.0
4,848,705	+		DZA65_RS22415	0.65	-0.5
4,848,705	+		DZA65_RS22415	0.65	+0.2
4,848,705	+		DZA65_RS22415	0.65	-0.8
4,848,705	+		DZA65_RS22415	0.65	+0.0
4,848,705	+		DZA65_RS22415	0.65	+0.2
4,848,705	+		DZA65_RS22415	0.65	-0.5
4,848,705	+		DZA65_RS22415	0.65	+0.0
4,848,705	+		DZA65_RS22415	0.65	-0.3
4,848,705	+		DZA65_RS22415	0.65	-0.4
4,848,705	+		DZA65_RS22415	0.65	+0.3
4,848,705	+		DZA65_RS22415	0.65	-1.3
4,848,705	+		DZA65_RS22415	0.65	+1.0
4,848,705	+		DZA65_RS22415	0.65	-1.5
4,848,705	+		DZA65_RS22415	0.65	-1.3
4,848,705	+		DZA65_RS22415	0.65	+0.2
4,848,705	+		DZA65_RS22415	0.65	+0.5
4,848,705	+		DZA65_RS22415	0.65	+0.0
4,848,705	+		DZA65_RS22415	0.65	+0.0
4,848,705	+		DZA65_RS22415	0.65	+0.0
4,848,705	+		DZA65_RS22415	0.65	-1.5
4,848,705	+		DZA65_RS22415	0.65	-1.1
4,848,705	+		DZA65_RS22415	0.65	+0.4
4,848,705	+		DZA65_RS22415	0.65	-2.0
4,848,705	+		DZA65_RS22415	0.65	-0.1
4,848,705	+		DZA65_RS22415	0.65	+0.7
4,848,705	+		DZA65_RS22415	0.65	-0.4
4,848,705	+		DZA65_RS22415	0.65	-0.3
4,848,706	-		DZA65_RS22415	0.65	-1.1
4,848,706	-		DZA65_RS22415	0.65	-0.2
4,848,706	-		DZA65_RS22415	0.65	+2.1
4,848,706	-		DZA65_RS22415	0.65	+0.0
4,848,706	-		DZA65_RS22415	0.65	-0.1
4,848,706	-		DZA65_RS22415	0.65	+0.2
4,848,706	-		DZA65_RS22415	0.65	-0.8
4,848,706	-		DZA65_RS22415	0.65	-0.2
4,848,706	-		DZA65_RS22415	0.65	+1.0
4,848,706	-		DZA65_RS22415	0.65	+1.0
4,848,706	-		DZA65_RS22415	0.65	+0.5
4,848,706	-		DZA65_RS22415	0.65	-0.9
4,848,706	-		DZA65_RS22415	0.65	+0.6
4,848,706	-		DZA65_RS22415	0.65	+0.1
4,848,706	-		DZA65_RS22415	0.65	-0.4
4,848,706	-		DZA65_RS22415	0.65	+1.0
4,848,706	-		DZA65_RS22415	0.65	-1.5
4,848,706	-		DZA65_RS22415	0.65	-0.5
4,848,706	-		DZA65_RS22415	0.65	-1.1
4,848,706	-		DZA65_RS22415	0.65	-0.1
4,848,706	-		DZA65_RS22415	0.65	+0.0
4,848,706	-		DZA65_RS22415	0.65	-0.2
4,848,706	-		DZA65_RS22415	0.65	+1.4
4,848,706	-		DZA65_RS22415	0.65	-1.5
4,848,706	-		DZA65_RS22415	0.65	+0.2
4,848,708	+		DZA65_RS22415	0.65	+0.4
4,848,708	+		DZA65_RS22415	0.65	-1.0
4,848,708	+		DZA65_RS22415	0.65	+0.2
4,848,708	+		DZA65_RS22415	0.65	+0.0
4,848,708	+		DZA65_RS22415	0.65	+0.0
4,848,708	+		DZA65_RS22415	0.65	+0.0
4,848,708	+		DZA65_RS22415	0.65	-1.0
4,848,708	+		DZA65_RS22415	0.65	-0.7
4,848,708	+		DZA65_RS22415	0.65	+0.6
4,848,708	+		DZA65_RS22415	0.65	+0.6
4,848,709	-		DZA65_RS22415	0.65	-1.0
4,848,709	-		DZA65_RS22415	0.65	-1.2
4,848,709	-		DZA65_RS22415	0.65	-0.4
4,848,709	-				+0.5
4,848,709	-		DZA65_RS22415	0.65	+0.3
4,848,789	+		DZA65_RS22415	0.68	-1.5
4,848,790	-		DZA65_RS22415	0.68	+0.2
4,848,870	+		DZA65_RS22415	0.72	+0.9
4,848,871	-		DZA65_RS22415	0.72	+1.8
4,848,871	-		DZA65_RS22415	0.72	-0.4
4,848,968	-		DZA65_RS22415	0.76	-0.8
4,848,968	-		DZA65_RS22415	0.76	+0.0
4,849,023	+		DZA65_RS22415	0.79	-0.0
4,849,024	-		DZA65_RS22415	0.79	+1.0
4,849,210	+		DZA65_RS22415	0.87	+0.5
4,849,210	+		DZA65_RS22415	0.87	+2.2
4,849,211	-		DZA65_RS22415	0.87	-1.0
4,849,211	-		DZA65_RS22415	0.87	+0.5
4,849,211	-		DZA65_RS22415	0.87	-0.4
4,849,244	-		DZA65_RS22415	0.89	-0.8
4,849,244	-		DZA65_RS22415	0.89	+0.2
4,849,274	+				+1.0
4,849,274	+				-0.1
4,849,275	-				-1.7
4,849,447	+				+0.0
4,849,447	+				+1.4
4,849,448	-				+0.0
4,849,460	+				+0.0
4,849,460	+				+0.9
4,849,460	+				+1.5
4,849,461	-				+1.0
4,849,461	-				-0.2
4,849,479	+				+1.0
4,849,479	+				-0.5
4,849,479	+				-0.7
4,849,479	+				+2.0
4,849,479	+				-0.3
4,849,479	+				-1.0
4,849,479	+				-1.7
4,849,479	+				-1.3
4,849,479	+				+1.0
4,849,479	+				+0.9
4,849,479	+				+0.3
4,849,479	+				+0.4
4,849,479	+				+0.2
4,849,480	-				-0.9
4,849,480	-				-0.3
4,849,480	-				-0.1
4,849,480	-				-0.7
4,849,480	-				-1.3
4,849,480	-				-1.1
4,849,480	-				+0.4
4,849,480	-				+0.3
4,849,480	-				-1.0
4,849,480	-				+0.4
4,849,480	-				+0.0
4,849,480	-				+0.3
4,849,480	-				-1.0
4,849,480	-				+0.8
4,849,480	-				+0.0
4,849,480	-				+0.1
4,849,480	-				-0.1
4,849,480	-				-0.2
4,849,480	-				-0.1
4,849,501	+				-0.5
4,849,501	+				+0.2
4,849,501	+				+0.0
4,849,501	+				+0.0
4,849,501	+				-0.2
4,849,501	+				-1.0
4,849,501	+				-1.8
4,849,501	+				+0.6
4,849,502	-				+0.4
4,849,502	-				+0.5
4,849,502	-				+0.2
4,849,502	-				+0.3
4,849,502	-				+0.4
4,849,502	-				+0.5
4,849,502	-				+0.9
4,849,502	-				-1.0
4,849,502	-				+0.2
4,849,502	-				-1.8
4,849,502	-				-0.5
4,849,502	-				-0.4
4,849,502	-				-1.0
4,849,502	-				+0.5
4,849,502	-				+0.5
4,849,502	-				+0.2
4,849,502	-				+0.2
4,849,502	-				-0.4
4,849,502	-				+0.9
4,849,502	-				-0.3
4,849,523	+				+0.2
4,849,523	+				+0.0
4,849,523	+				-0.3
4,849,523	+				+0.6
4,849,523	+				-2.5
4,849,523	+				+0.6
4,849,524	-				+0.0
4,849,524	-				-0.7
4,849,554	+				+0.4
4,849,570	+				-0.4
4,849,607	-				+0.7
4,849,627	+				-0.5
4,849,627	+				-0.1
4,849,627	+				+0.2
4,849,627	+				+0.5
4,849,627	+				+1.3
4,849,627	+				-1.0
4,849,628	-				-0.8
4,849,628	-				-0.1
4,849,628	-				-0.1
4,849,628	-				+0.1
4,849,628	-				+0.9
4,849,630	+				+1.0
4,849,630	+				+0.4
4,849,630	+				+0.0
4,849,631	-				-0.4
4,849,631	-				-0.5
4,849,631	-				+1.0
4,849,652	+				-0.3