Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS14085

Experiment: M9+polygalacturonate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+polygalacturonate
3,020,739	+		DZA65_RS14080	0.18	-0.0
3,020,782	-		DZA65_RS14080	0.22	-0.8
3,020,800	+		DZA65_RS14080	0.24	-0.1
3,020,814	+		DZA65_RS14080	0.25	+0.7
3,020,815	-		DZA65_RS14080	0.25	-0.3
3,020,815	-		DZA65_RS14080	0.25	-0.4
3,020,935	+		DZA65_RS14080	0.36	-0.2
3,020,936	-		DZA65_RS14080	0.36	-0.4
3,020,962	+		DZA65_RS14080	0.38	-1.7
3,020,962	+		DZA65_RS14080	0.38	-0.2
3,020,963	-		DZA65_RS14080	0.38	-1.2
3,020,963	-		DZA65_RS14080	0.38	+1.3
3,020,963	-		DZA65_RS14080	0.38	-0.7
3,020,963	-		DZA65_RS14080	0.38	+0.3
3,020,968	+		DZA65_RS14080	0.38	-0.7
3,020,977	-		DZA65_RS14080	0.39	-0.4
3,020,995	+		DZA65_RS14080	0.41	+0.3
3,020,995	+		DZA65_RS14080	0.41	-0.7
3,020,995	+		DZA65_RS14080	0.41	-0.1
3,020,995	+		DZA65_RS14080	0.41	-1.2
3,020,995	+		DZA65_RS14080	0.41	-1.5
3,020,995	+		DZA65_RS14080	0.41	-0.6
3,020,996	-		DZA65_RS14080	0.41	-1.0
3,020,996	-		DZA65_RS14080	0.41	-0.7
3,021,048	+		DZA65_RS14080	0.46	-0.3
3,021,049	-		DZA65_RS14080	0.46	+0.2
3,021,049	-		DZA65_RS14080	0.46	+0.3
3,021,054	-		DZA65_RS14080	0.46	+0.6
3,021,054	-		DZA65_RS14080	0.46	+0.6
3,021,121	-		DZA65_RS14080	0.52	-0.6
3,021,164	+		DZA65_RS14080	0.56	-1.1
3,021,164	+		DZA65_RS14080	0.56	+0.3
3,021,164	+		DZA65_RS14080	0.56	-0.9
3,021,164	+		DZA65_RS14080	0.56	+0.2
3,021,165	-		DZA65_RS14080	0.56	-1.0
3,021,165	-		DZA65_RS14080	0.56	+0.1
3,021,165	-		DZA65_RS14080	0.56	-0.9
3,021,193	-		DZA65_RS14080	0.58	+0.3
3,021,210	+		DZA65_RS14080	0.60	+0.7
3,021,211	-		DZA65_RS14080	0.60	-0.1
3,021,211	-		DZA65_RS14080	0.60	+0.6
3,021,279	+		DZA65_RS14080	0.66	-0.1
3,021,280	-		DZA65_RS14080	0.66	-0.9
3,021,337	-		DZA65_RS14080	0.71	+0.4
3,021,360	+		DZA65_RS14080	0.73	-0.2
3,021,360	+		DZA65_RS14080	0.73	-0.0
3,021,360	+		DZA65_RS14080	0.73	-0.1
3,021,360	+		DZA65_RS14080	0.73	-2.3
3,021,360	+		DZA65_RS14080	0.73	-0.1
3,021,361	-		DZA65_RS14080	0.73	-0.0
3,021,361	-		DZA65_RS14080	0.73	+0.8
3,021,361	-		DZA65_RS14080	0.73	-0.1
3,021,361	-		DZA65_RS14080	0.73	+0.2
3,021,361	-		DZA65_RS14080	0.73	+0.8
3,021,363	+		DZA65_RS14080	0.73	-0.3
3,021,363	+		DZA65_RS14080	0.73	-0.5
3,021,363	+		DZA65_RS14080	0.73	-0.0
3,021,364	-		DZA65_RS14080	0.73	+1.0
3,021,399	+		DZA65_RS14080	0.77	-2.3
3,021,400	-		DZA65_RS14080	0.77	+0.6
3,021,400	-		DZA65_RS14080	0.77	+0.6
3,021,488	+		DZA65_RS14080	0.84	-1.7
3,021,581	+				-0.9
3,021,581	+				-1.3
3,021,582	-				+1.0
3,021,582	-				+0.0
3,021,628	-				+1.0
3,021,628	-				+2.1
3,021,628	-				+0.5
3,021,704	+				+1.2
3,021,704	+				-2.0
3,021,704	+				-1.0
3,021,705	-				-0.6
3,021,705	-				+1.3
3,021,710	+				+0.8
3,021,710	+				+0.9
3,021,710	+				+0.3
3,021,711	-				-0.4
3,021,729	-				+0.2
3,021,751	+		DZA65_RS14085	0.10	-0.1
3,021,752	-		DZA65_RS14085	0.10	-0.2
3,021,762	-		DZA65_RS14085	0.11	-1.9
3,021,762	-		DZA65_RS14085	0.11	+0.7
3,021,793	+		DZA65_RS14085	0.15	+0.3
3,021,867	+		DZA65_RS14085	0.23	+0.5
3,021,867	+		DZA65_RS14085	0.23	+0.4
3,021,867	+		DZA65_RS14085	0.23	-0.7
3,021,867	+		DZA65_RS14085	0.23	-0.4
3,021,867	+		DZA65_RS14085	0.23	-0.1
3,021,867	+				+0.3
3,021,868	-		DZA65_RS14085	0.23	+0.1
3,021,868	-		DZA65_RS14085	0.23	-1.0
3,021,868	-		DZA65_RS14085	0.23	+0.9
3,021,868	-		DZA65_RS14085	0.23	-0.7
3,021,868	-		DZA65_RS14085	0.23	+1.9
3,021,868	-		DZA65_RS14085	0.23	+0.9
3,021,888	+		DZA65_RS14085	0.26	+0.1
3,021,888	+		DZA65_RS14085	0.26	-1.7
3,021,888	+		DZA65_RS14085	0.26	+3.3
3,021,889	-		DZA65_RS14085	0.26	-0.6
3,021,898	+		DZA65_RS14085	0.27	-0.3
3,021,898	+		DZA65_RS14085	0.27	-1.3
3,021,911	+		DZA65_RS14085	0.28	-0.2
3,021,912	-		DZA65_RS14085	0.28	-0.7
3,021,923	+		DZA65_RS14085	0.30	-0.6
3,021,923	+		DZA65_RS14085	0.30	+0.1
3,021,924	-		DZA65_RS14085	0.30	-0.8
3,021,924	-		DZA65_RS14085	0.30	+0.4
3,021,924	-		DZA65_RS14085	0.30	-0.0
3,021,927	+		DZA65_RS14085	0.30	+0.6
3,021,927	+		DZA65_RS14085	0.30	+0.5
3,021,927	+		DZA65_RS14085	0.30	+1.8
3,021,927	+		DZA65_RS14085	0.30	+0.7
3,021,927	+		DZA65_RS14085	0.30	+1.8
3,021,927	+		DZA65_RS14085	0.30	-0.5
3,021,927	+		DZA65_RS14085	0.30	+1.9
3,021,928	-		DZA65_RS14085	0.30	-0.4
3,021,928	-		DZA65_RS14085	0.30	-0.8
3,021,928	-		DZA65_RS14085	0.30	-0.2
3,021,928	-		DZA65_RS14085	0.30	+1.6
3,021,928	-		DZA65_RS14085	0.30	-1.0
3,021,928	-		DZA65_RS14085	0.30	+0.0
3,021,928	-		DZA65_RS14085	0.30	+2.1
3,022,146	-		DZA65_RS14085	0.55	+1.2
3,022,163	-		DZA65_RS14085	0.57	+0.8
3,022,179	+		DZA65_RS14085	0.58	-0.4
3,022,184	+		DZA65_RS14085	0.59	-0.2
3,022,186	+		DZA65_RS14085	0.59	+0.4
3,022,186	+		DZA65_RS14085	0.59	+1.4
3,022,186	+		DZA65_RS14085	0.59	+1.6
3,022,186	+		DZA65_RS14085	0.59	+1.9
3,022,186	+		DZA65_RS14085	0.59	+0.5
3,022,186	+		DZA65_RS14085	0.59	-0.0
3,022,186	+		DZA65_RS14085	0.59	+1.5
3,022,186	+		DZA65_RS14085	0.59	+0.5
3,022,186	+		DZA65_RS14085	0.59	+0.9
3,022,187	-		DZA65_RS14085	0.59	+0.3
3,022,187	-		DZA65_RS14085	0.59	+0.4
3,022,187	-		DZA65_RS14085	0.59	+0.8
3,022,187	-		DZA65_RS14085	0.59	+0.3
3,022,187	-		DZA65_RS14085	0.59	-0.4
3,022,187	-		DZA65_RS14085	0.59	-0.5
3,022,302	+		DZA65_RS14085	0.72	+0.4
3,022,302	+		DZA65_RS14085	0.72	+0.2
3,022,303	-		DZA65_RS14085	0.72	+0.7
3,022,303	-		DZA65_RS14085	0.72	+0.6
3,022,303	-		DZA65_RS14085	0.72	+0.3
3,022,305	+		DZA65_RS14085	0.73	+1.3
3,022,324	+		DZA65_RS14085	0.75	+1.0
3,022,324	+		DZA65_RS14085	0.75	+1.2
3,022,324	+		DZA65_RS14085	0.75	+0.5
3,022,324	+		DZA65_RS14085	0.75	-0.7
3,022,324	+		DZA65_RS14085	0.75	+1.2
3,022,324	+		DZA65_RS14085	0.75	+0.3
3,022,324	+		DZA65_RS14085	0.75	+1.2
3,022,324	+		DZA65_RS14085	0.75	+1.5
3,022,324	+		DZA65_RS14085	0.75	+0.4
3,022,324	+		DZA65_RS14085	0.75	-1.1
3,022,324	+		DZA65_RS14085	0.75	+2.5
3,022,324	+		DZA65_RS14085	0.75	+0.3
3,022,325	-		DZA65_RS14085	0.75	-2.7
3,022,325	-		DZA65_RS14085	0.75	+3.0
3,022,325	-		DZA65_RS14085	0.75	+0.7
3,022,325	-		DZA65_RS14085	0.75	+1.0
3,022,325	-		DZA65_RS14085	0.75	-1.2
3,022,325	-		DZA65_RS14085	0.75	-0.5
3,022,325	-		DZA65_RS14085	0.75	+1.0
3,022,325	-		DZA65_RS14085	0.75	-0.4
3,022,325	-		DZA65_RS14085	0.75	+0.1
3,022,325	-		DZA65_RS14085	0.75	+1.6
3,022,325	-		DZA65_RS14085	0.75	-0.1
3,022,325	-				+1.4
3,022,326	+		DZA65_RS14085	0.75	-0.1
3,022,337	+		DZA65_RS14085	0.76	+1.0
3,022,337	+		DZA65_RS14085	0.76	+0.3
3,022,338	-		DZA65_RS14085	0.76	+0.8
3,022,338	-		DZA65_RS14085	0.76	+2.1
3,022,338	-		DZA65_RS14085	0.76	+1.4
3,022,338	-		DZA65_RS14085	0.76	+1.6
3,022,338	-		DZA65_RS14085	0.76	-0.1
3,022,338	-		DZA65_RS14085	0.76	-0.5
3,022,339	+		DZA65_RS14085	0.76	+1.3
3,022,340	-		DZA65_RS14085	0.77	+0.8
3,022,404	-		DZA65_RS14085	0.84	+0.1
3,022,412	+		DZA65_RS14085	0.85	+1.6
3,022,412	+		DZA65_RS14085	0.85	+0.6
3,022,413	-		DZA65_RS14085	0.85	+0.4
3,022,413	-		DZA65_RS14085	0.85	+0.5
3,022,413	-		DZA65_RS14085	0.85	-0.1
3,022,413	-		DZA65_RS14085	0.85	+0.4
3,022,413	-		DZA65_RS14085	0.85	+0.1
3,022,413	-				+0.0
3,022,439	+		DZA65_RS14085	0.88	+0.9
3,022,439	+		DZA65_RS14085	0.88	-0.2
3,022,462	+				-0.9
3,022,462	+				-0.3
3,022,462	+				+1.5
3,022,463	-				-0.3
3,022,463	-				+1.4
3,022,463	-				+0.3
3,022,506	+				+0.3
3,022,506	+				-1.0
3,022,506	+				+1.5
3,022,506	+				+1.0
3,022,506	+				+0.8
3,022,506	+				+0.3
3,022,506	+				-0.8
3,022,506	+				-0.1
3,022,506	+				+0.7
3,022,507	-				+0.0
3,022,507	-				+0.7
3,022,507	-				+0.6
3,022,507	-				+0.7
3,022,507	-				+1.1
3,022,507	-				-0.3
3,022,508	+				+0.1
3,022,508	+				+0.8
3,022,508	+				-0.3
3,022,508	+				+0.8
3,022,508	+				+0.6
3,022,509	-				+0.3
3,022,515	+				+1.1
3,022,515	+				-0.3
3,022,515	+				+0.9
3,022,515	+				+0.1
3,022,515	+				+1.5
3,022,516	-				-0.3
3,022,516	-				+1.3
3,022,516	-				+1.2
3,022,517	+				+0.8
3,022,517	+				+0.7
3,022,528	+				+0.8
3,022,536	+				+1.6
3,022,536	+				+0.8
3,022,537	-				+3.0
3,022,537	-				+0.1
3,022,537	-				+0.3
3,022,538	+				+0.9
3,022,538	+				+0.6
3,022,538	+				+1.4
3,022,539	-				-0.7
3,022,539	-				+0.5
3,022,559	-				+2.3
3,022,560	+				+1.3
3,022,560	+				-0.3
3,022,561	-				+0.9
3,022,561	-				-1.7
3,022,561	-				+0.7
3,022,561	-				+0.2
3,022,561	-				-1.0
3,022,561	-				+0.8
3,022,561	-				-0.3
3,022,564	+				+0.6
3,022,567	+				+1.3
3,022,568	-				+1.3
3,022,590	+				+0.9
3,022,591	-				+0.9
3,022,603	-				+1.2
3,022,720	+				-0.3
3,022,720	+				+0.7
3,022,720	+				-0.7
3,022,721	-				-0.4
3,022,721	-				-2.3
3,022,759	+		DZA65_RS14090	0.13	+0.0
3,022,760	-		DZA65_RS14090	0.14	+1.3
3,022,784	-		DZA65_RS14090	0.18	+1.1
3,022,784	-		DZA65_RS14090	0.18	-0.0
3,022,800	+		DZA65_RS14090	0.21	+1.3
3,022,800	+		DZA65_RS14090	0.21	+1.1
3,022,825	-		DZA65_RS14090	0.25	+1.6
3,022,827	+		DZA65_RS14090	0.25	+1.0
3,022,827	+		DZA65_RS14090	0.25	+1.2
3,022,827	+		DZA65_RS14090	0.25	+1.5
3,022,827	+		DZA65_RS14090	0.25	+2.1
3,022,828	-		DZA65_RS14090	0.25	+1.4
3,022,828	-		DZA65_RS14090	0.25	+1.1
3,022,828	-		DZA65_RS14090	0.25	+0.3
3,022,828	-		DZA65_RS14090	0.25	+2.1
3,022,828	-		DZA65_RS14090	0.25	+1.6
3,022,828	-		DZA65_RS14090	0.25	+1.9
3,022,828	-		DZA65_RS14090	0.25	+1.5
3,022,848	+		DZA65_RS14090	0.29	-0.2
3,022,848	+		DZA65_RS14090	0.29	+0.8
3,022,848	+		DZA65_RS14090	0.29	+1.1
3,022,848	+		DZA65_RS14090	0.29	+0.5
3,022,848	+		DZA65_RS14090	0.29	+1.3
3,022,848	+		DZA65_RS14090	0.29	+1.0
3,022,848	+		DZA65_RS14090	0.29	-0.6
3,022,848	+		DZA65_RS14090	0.29	+1.3
3,022,848	+		DZA65_RS14090	0.29	+1.3
3,022,848	+		DZA65_RS14090	0.29	+1.0
3,022,848	+		DZA65_RS14090	0.29	+0.5
3,022,848	+		DZA65_RS14090	0.29	-1.3
3,022,849	-		DZA65_RS14090	0.29	+0.3
3,022,849	-		DZA65_RS14090	0.29	-1.9
3,022,849	-		DZA65_RS14090	0.29	+1.4
3,022,849	-		DZA65_RS14090	0.29	+1.6
3,022,849	-		DZA65_RS14090	0.29	+1.4
3,022,849	-		DZA65_RS14090	0.29	+1.2
3,022,864	+		DZA65_RS14090	0.32	+2.9
3,022,864	+		DZA65_RS14090	0.32	+1.1
3,022,864	+		DZA65_RS14090	0.32	+1.2
3,022,864	+		DZA65_RS14090	0.32	+0.6
3,022,864	+		DZA65_RS14090	0.32	+1.2
3,022,864	+		DZA65_RS14090	0.32	+0.7
3,022,865	-		DZA65_RS14090	0.32	+1.1
3,022,865	-		DZA65_RS14090	0.32	+1.1
3,022,865	-		DZA65_RS14090	0.32	+1.6
3,022,865	-		DZA65_RS14090	0.32	+0.0
3,022,865	-		DZA65_RS14090	0.32	+1.4
3,022,865	-		DZA65_RS14090	0.32	+0.3
3,022,865	-		DZA65_RS14090	0.32	+1.3
3,022,865	-		DZA65_RS14090	0.32	+1.5
3,022,869	+		DZA65_RS14090	0.32	+0.2
3,022,955	+		DZA65_RS14090	0.47	+2.1
3,022,964	+		DZA65_RS14090	0.49	-1.0
3,022,965	-		DZA65_RS14090	0.49	+1.3
3,022,975	+		DZA65_RS14090	0.51	+1.7
3,022,976	-		DZA65_RS14090	0.51	+1.5
3,022,976	-		DZA65_RS14090	0.51	+0.1
3,022,992	+		DZA65_RS14090	0.54	+0.3
3,022,992	+		DZA65_RS14090	0.54	+1.5
3,022,993	-		DZA65_RS14090	0.54	+1.7
3,022,993	-		DZA65_RS14090	0.54	+0.9
3,022,993	-		DZA65_RS14090	0.54	+0.5
3,022,993	-		DZA65_RS14090	0.54	+0.7
3,023,021	+		DZA65_RS14090	0.59	+2.1
3,023,021	+		DZA65_RS14090	0.59	+1.2
3,023,022	-		DZA65_RS14090	0.59	+1.9
3,023,028	+		DZA65_RS14090	0.60	+1.3
3,023,028	+		DZA65_RS14090	0.60	+0.9
3,023,029	-		DZA65_RS14090	0.60	+1.5
3,023,030	+		DZA65_RS14090	0.60	+0.7
3,023,030	+		DZA65_RS14090	0.60	+1.6
3,023,030	+		DZA65_RS14090	0.60	-0.4
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3,023,030	+		DZA65_RS14090	0.60	+0.9
3,023,030	+		DZA65_RS14090	0.60	+1.8
3,023,030	+		DZA65_RS14090	0.60	+1.4
3,023,031	-		DZA65_RS14090	0.60	+1.1
3,023,031	-		DZA65_RS14090	0.60	+0.6
3,023,031	-		DZA65_RS14090	0.60	+0.1
3,023,031	-		DZA65_RS14090	0.60	+1.4
3,023,031	-		DZA65_RS14090	0.60	+1.2
3,023,031	-		DZA65_RS14090	0.60	+0.7
3,023,049	+		DZA65_RS14090	0.64	+1.1
3,023,049	+		DZA65_RS14090	0.64	+1.6
3,023,068	-		DZA65_RS14090	0.67	-0.6
3,023,080	-		DZA65_RS14090	0.69	+0.6
3,023,119	+		DZA65_RS14090	0.76	+1.5
3,023,120	-		DZA65_RS14090	0.76	+2.2
3,023,120	-		DZA65_RS14090	0.76	+0.8
3,023,128	-		DZA65_RS14090	0.77	+1.8
3,023,128	-		DZA65_RS14090	0.77	+2.8
3,023,128	-		DZA65_RS14090	0.77	+1.9
3,023,129	+		DZA65_RS14090	0.77	+1.3
3,023,129	+		DZA65_RS14090	0.77	+2.3
3,023,129	+		DZA65_RS14090	0.77	+1.0
3,023,129	+		DZA65_RS14090	0.77	+1.6
3,023,129	+		DZA65_RS14090	0.77	+1.3
3,023,140	+		DZA65_RS14090	0.79	+0.8
3,023,141	-		DZA65_RS14090	0.79	+1.0
3,023,155	+		DZA65_RS14090	0.82	+2.4
3,023,229	+				+0.3
3,023,229	+				+1.0
3,023,229	+				+1.2
3,023,229	+				+1.0
3,023,229	+				+1.9
3,023,230	-				+0.6
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3,023,245	-				+1.5
3,023,263	+				-0.1
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3,023,277	-				+0.3
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3,023,379	+		DZA65_RS14095	0.33	+1.1
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3,023,382	+		DZA65_RS14095	0.34	+2.3
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3,023,421	+		DZA65_RS14095	0.45	+1.1
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3,023,425	-		DZA65_RS14095	0.46	+1.8
3,023,425	-		DZA65_RS14095	0.46	+1.4
3,023,425	-		DZA65_RS14095	0.46	+0.9
3,023,425	-		DZA65_RS14095	0.46	+0.6
3,023,448	+		DZA65_RS14095	0.53	+1.8
3,023,538	+		DZA65_RS14095	0.79	+0.8
3,023,539	-		DZA65_RS14095	0.79	+1.4
3,023,539	-		DZA65_RS14095	0.79	+1.2
3,023,539	-		DZA65_RS14095	0.79	+1.3
3,023,541	+		DZA65_RS14095	0.79	+1.2