Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS13340

Experiment: M9+starch

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+starch
2,855,131	+		DZA65_RS13330	0.66	+0.2
2,855,131	+		DZA65_RS13330	0.66	-0.0
2,855,132	-		DZA65_RS13330	0.66	-1.7
2,855,132	-		DZA65_RS13330	0.66	-0.5
2,855,425	+				-0.3
2,855,425	+				+0.5
2,855,425	+				+2.3
2,855,425	+				-2.6
2,855,426	-				-2.0
2,855,426	-				-0.4
2,855,426	-				+1.6
2,855,426	-				-0.5
2,855,557	-				-1.7
2,855,560	-				-1.5
2,855,565	+				-1.4
2,855,619	-				+1.1
2,855,619	-				+0.2
2,855,669	-				+0.6
2,855,729	+				-0.7
2,855,732	+				-0.3
2,855,732	+				-0.1
2,855,732	+				-0.8
2,855,733	-				+0.3
2,855,733	-				-0.9
2,855,733	-				-1.3
2,855,733	-				+0.0
2,855,733	-				-1.7
2,855,748	+				+0.7
2,855,748	+				-0.1
2,855,749	-				-1.3
2,855,749	-				+0.3
2,855,749	-				-0.5
2,855,760	-				-0.7
2,855,794	+				-0.5
2,855,794	+				-0.7
2,855,795	-				-3.5
2,855,795	-				+0.9
2,855,795	-				-1.3
2,855,795	-				+0.3
2,855,814	+				-0.1
2,855,814	+				-1.1
2,855,814	+				+0.1
2,855,814	+				-0.7
2,855,815	-				-2.2
2,855,815	-				-3.0
2,855,921	+				+0.6
2,855,921	+				+0.8
2,855,921	+				-1.0
2,855,922	-				-0.6
2,855,922	-				-0.2
2,855,966	+				+0.8
2,855,969	+				-0.7
2,855,969	+				+0.5
2,855,969	+				-2.5
2,855,969	+				+1.3
2,855,970	-				+0.2
2,855,970	-				+0.6
2,856,013	+				+0.3
2,856,034	-				+0.0
2,856,034	-				+1.9
2,856,148	+				-0.5
2,856,148	+				+1.0
2,856,152	+				-1.0
2,856,153	-				+0.9
2,856,153	-				-1.0
2,856,153	-				-0.6
2,856,153	-				+0.1
2,856,444	+		DZA65_RS13340	0.18	+2.3
2,856,444	+		DZA65_RS13340	0.18	-0.7
2,856,444	+		DZA65_RS13340	0.18	+2.1
2,856,444	+		DZA65_RS13340	0.18	-0.9
2,856,445	-		DZA65_RS13340	0.18	-1.0
2,856,445	-		DZA65_RS13340	0.18	+2.9
2,856,445	-		DZA65_RS13340	0.18	+1.0
2,856,445	-		DZA65_RS13340	0.18	-2.0
2,856,445	-		DZA65_RS13340	0.18	-1.0
2,856,445	-		DZA65_RS13340	0.18	-1.7
2,856,445	-		DZA65_RS13340	0.18	-1.2
2,856,445	-		DZA65_RS13340	0.18	-0.5
2,856,445	-		DZA65_RS13340	0.18	-1.0
2,856,459	+		DZA65_RS13340	0.19	-0.2
2,856,459	+		DZA65_RS13340	0.19	+0.2
2,856,459	+		DZA65_RS13340	0.19	+0.9
2,856,459	+		DZA65_RS13340	0.19	-1.3
2,856,460	-		DZA65_RS13340	0.19	+0.9
2,856,460	-		DZA65_RS13340	0.19	-1.0
2,856,460	-		DZA65_RS13340	0.19	+0.2
2,856,460	-		DZA65_RS13340	0.19	+0.6
2,856,460	-		DZA65_RS13340	0.19	+1.0
2,856,460	-		DZA65_RS13340	0.19	-0.1
2,856,460	-		DZA65_RS13340	0.19	+0.0
2,856,550	+		DZA65_RS13340	0.23	+0.5
2,856,550	+		DZA65_RS13340	0.23	-1.3
2,856,550	+		DZA65_RS13340	0.23	+0.0
2,856,550	+		DZA65_RS13340	0.23	+0.4
2,856,551	-		DZA65_RS13340	0.23	+0.7
2,856,629	-		DZA65_RS13340	0.26	+0.3
2,856,724	+		DZA65_RS13340	0.30	-0.4
2,856,724	+		DZA65_RS13340	0.30	+0.1
2,856,724	+		DZA65_RS13340	0.30	+0.9
2,856,725	-		DZA65_RS13340	0.30	+1.6
2,856,725	-		DZA65_RS13340	0.30	+0.9
2,856,725	-		DZA65_RS13340	0.30	+0.1
2,856,725	-		DZA65_RS13340	0.30	+1.0
2,856,725	-		DZA65_RS13340	0.30	-0.7
2,856,745	+		DZA65_RS13340	0.31	+0.8
2,856,745	+		DZA65_RS13340	0.31	-1.5
2,856,833	+		DZA65_RS13340	0.35	-1.7
2,856,833	+		DZA65_RS13340	0.35	+0.3
2,856,834	-		DZA65_RS13340	0.35	-0.4
2,856,834	-		DZA65_RS13340	0.35	+0.0
2,856,834	-		DZA65_RS13340	0.35	+0.0
2,856,834	-		DZA65_RS13340	0.35	-2.2
2,856,834	-		DZA65_RS13340	0.35	+0.3
2,856,834	-		DZA65_RS13340	0.35	+0.8
2,856,834	-		DZA65_RS13340	0.35	-0.7
2,856,929	+		DZA65_RS13340	0.39	+1.3
2,856,929	+		DZA65_RS13340	0.39	+0.3
2,857,000	+		DZA65_RS13340	0.42	+0.0
2,857,000	+		DZA65_RS13340	0.42	-1.0
2,857,006	+		DZA65_RS13340	0.42	+0.7
2,857,006	+		DZA65_RS13340	0.42	+1.3
2,857,006	+		DZA65_RS13340	0.42	-1.7
2,857,007	-		DZA65_RS13340	0.42	-0.4
2,857,340	-		DZA65_RS13340	0.56	-0.4
2,857,394	+		DZA65_RS13340	0.58	+0.5
2,857,395	-		DZA65_RS13340	0.58	+0.2
2,857,395	-		DZA65_RS13340	0.58	-0.2
2,857,395	-		DZA65_RS13340	0.58	-0.7
2,857,395	-		DZA65_RS13340	0.58	-0.0
2,857,396	+		DZA65_RS13340	0.58	-0.3
2,857,396	+		DZA65_RS13340	0.58	-0.4
2,857,396	+		DZA65_RS13340	0.58	+1.8
2,857,396	+		DZA65_RS13340	0.58	+0.2
2,857,396	+		DZA65_RS13340	0.58	-1.4
2,857,396	+		DZA65_RS13340	0.58	-0.0
2,857,396	+		DZA65_RS13340	0.58	+0.9
2,857,396	+		DZA65_RS13340	0.58	-0.8
2,857,396	+				+0.3
2,857,396	+		DZA65_RS13340	0.58	+0.3
2,857,396	+		DZA65_RS13340	0.58	-0.4
2,857,396	+		DZA65_RS13340	0.58	-0.1
2,857,396	+		DZA65_RS13340	0.58	-1.7
2,857,396	+		DZA65_RS13340	0.58	+0.3
2,857,396	+		DZA65_RS13340	0.58	-0.1
2,857,397	-		DZA65_RS13340	0.58	-1.0
2,857,397	-		DZA65_RS13340	0.58	-0.5
2,857,397	-		DZA65_RS13340	0.58	+1.0
2,857,397	-		DZA65_RS13340	0.58	-0.6
2,857,397	-		DZA65_RS13340	0.58	-2.3
2,857,397	-		DZA65_RS13340	0.58	-0.3
2,857,397	-		DZA65_RS13340	0.58	-1.3
2,857,397	-		DZA65_RS13340	0.58	+2.3
2,857,397	-		DZA65_RS13340	0.58	+0.6
2,857,397	-		DZA65_RS13340	0.58	-0.2
2,857,397	-		DZA65_RS13340	0.58	+0.6
2,857,397	-		DZA65_RS13340	0.58	+0.0
2,857,397	-		DZA65_RS13340	0.58	+0.0
2,857,397	-		DZA65_RS13340	0.58	-1.2
2,857,397	-		DZA65_RS13340	0.58	+1.5
2,857,397	-		DZA65_RS13340	0.58	+0.5
2,857,397	-		DZA65_RS13340	0.58	-2.0
2,857,397	-		DZA65_RS13340	0.58	-2.0
2,857,582	+		DZA65_RS13340	0.66	+0.7
2,857,583	-		DZA65_RS13340	0.66	-1.7
2,857,583	-		DZA65_RS13340	0.66	+0.3
2,857,620	+		DZA65_RS13340	0.68	+0.2
2,857,620	+		DZA65_RS13340	0.68	+0.6
2,857,620	+		DZA65_RS13340	0.68	+1.3
2,857,621	-		DZA65_RS13340	0.68	-0.4
2,857,621	-		DZA65_RS13340	0.68	+1.5
2,857,621	-		DZA65_RS13340	0.68	-0.4
2,857,623	+		DZA65_RS13340	0.68	+0.5
2,857,623	+		DZA65_RS13340	0.68	-0.1
2,857,624	-		DZA65_RS13340	0.68	-0.3
2,857,640	+		DZA65_RS13340	0.68	-0.3
2,857,641	-		DZA65_RS13340	0.68	+1.3
2,857,655	+		DZA65_RS13340	0.69	-0.4
2,857,655	+		DZA65_RS13340	0.69	+0.2
2,857,656	-		DZA65_RS13340	0.69	-0.5
2,857,663	+		DZA65_RS13340	0.69	+0.3
2,857,663	+		DZA65_RS13340	0.69	-0.2
2,857,663	+		DZA65_RS13340	0.69	-1.3
2,857,664	-		DZA65_RS13340	0.69	-1.9
2,857,664	-		DZA65_RS13340	0.69	-0.5
2,857,664	-		DZA65_RS13340	0.69	-0.3
2,857,664	-		DZA65_RS13340	0.69	-0.1
2,857,664	-		DZA65_RS13340	0.69	-0.2
2,857,727	+		DZA65_RS13340	0.72	-1.7
2,857,727	+		DZA65_RS13340	0.72	-0.7
2,857,727	+		DZA65_RS13340	0.72	+2.3
2,857,766	+		DZA65_RS13340	0.74	+0.4
2,857,766	+		DZA65_RS13340	0.74	-1.2
2,857,767	-		DZA65_RS13340	0.74	+1.1
2,857,767	-		DZA65_RS13340	0.74	-0.2
2,857,864	+		DZA65_RS13340	0.78	+0.3
2,857,868	-		DZA65_RS13340	0.78	-0.3
2,857,871	+		DZA65_RS13340	0.78	+1.3
2,857,938	+		DZA65_RS13340	0.81	-0.6
2,857,938	+		DZA65_RS13340	0.81	+1.3
2,857,938	+		DZA65_RS13340	0.81	+1.2
2,857,938	+		DZA65_RS13340	0.81	-0.7
2,857,938	+		DZA65_RS13340	0.81	+0.5
2,857,939	-		DZA65_RS13340	0.81	-0.9
2,857,939	-		DZA65_RS13340	0.81	-1.3
2,857,939	-		DZA65_RS13340	0.81	+0.4
2,858,053	+		DZA65_RS13340	0.86	-1.0
2,858,053	+		DZA65_RS13340	0.86	-1.1
2,858,179	+				+0.0
2,858,179	+				+1.3
2,858,179	+				-0.5
2,858,179	+				+0.2
2,858,179	+				+0.0
2,858,179	+				-0.8
2,858,179	+				+0.9
2,858,179	+				-0.4
2,858,179	+				-0.7
2,858,179	+				-0.2
2,858,180	-				-1.1
2,858,180	-				+0.3
2,858,180	-				-0.5
2,858,180	-				+0.6
2,858,180	-				+1.8
2,858,180	-				+0.7
2,858,180	-				-0.1
2,858,183	+				+0.6
2,858,183	+				+0.5
2,858,183	+				-0.7
2,858,183	+				+1.0
2,858,184	-				-0.0
2,858,220	-				-0.2
2,858,336	+				+0.3
2,858,337	-				+1.1
2,858,337	-				-1.0
2,858,337	-				+0.5
2,858,350	+				-0.1
2,858,350	+				+1.0
2,858,350	+				+0.7
2,858,351	-				+0.5
2,858,351	-				-1.3
2,858,351	-				-0.8
2,858,351	-				-1.0
2,858,351	-				-0.5
2,858,351	-				+1.4
2,858,363	+				-1.2
2,858,363	+				-1.1
2,858,364	-				-1.2
2,858,364	-				+0.1
2,858,370	-				-2.2
2,858,384	+				+0.7
2,858,384	+				-1.7
2,858,385	-				-0.9
2,858,385	-				+1.7
2,858,412	-				+0.7
2,858,417	+				+0.2
2,858,418	-				-0.4
2,858,418	-				+0.8
2,858,418	-				-0.9
2,858,418	-				+0.7
2,858,418	-				-0.7
2,858,418	-				-1.9
2,858,418	-				+0.6
2,858,471	+				+0.1
2,858,472	-				-0.7
2,858,472	-				+0.1
2,858,480	-				+0.2
2,858,480	-				+1.7
2,858,580	+				+0.8
2,858,585	+				-0.1
2,858,586	-				+1.6
2,858,591	-				-0.9
2,858,591	-				-0.5
2,858,591	-				-2.4
2,858,593	+				-2.3
2,858,593	+				+0.4
2,858,593	+				+0.3
2,858,677	+				+2.6
2,858,690	+				+0.3
2,858,691	-				+1.1
2,858,691	-				+0.7
2,858,719	+				-0.9
2,858,724	+				-0.8
2,858,724	+				-0.1
2,858,724	+				+1.1
2,858,724	+				+0.2
2,858,724	+				-0.3
2,858,724	+				+0.5
2,858,725	-				-0.1
2,858,725	-				-0.1
2,858,725	-				+1.0
2,858,805	+		DZA65_RS13345	0.12	+0.5
2,858,805	+		DZA65_RS13345	0.12	+0.1
2,858,805	+		DZA65_RS13345	0.12	-1.7
2,858,805	+		DZA65_RS13345	0.12	-0.2
2,858,805	+		DZA65_RS13345	0.12	+2.0
2,858,806	-		DZA65_RS13345	0.12	+0.2
2,858,806	-		DZA65_RS13345	0.12	-0.4
2,858,806	-		DZA65_RS13345	0.12	-0.2
2,858,807	+		DZA65_RS13345	0.12	-0.0
2,858,808	-		DZA65_RS13345	0.12	+0.3
2,858,808	-		DZA65_RS13345	0.12	-0.9
2,858,808	-		DZA65_RS13345	0.12	+0.5
2,858,808	-		DZA65_RS13345	0.12	+0.2
2,858,864	+		DZA65_RS13345	0.19	-0.0
2,858,865	-		DZA65_RS13345	0.19	-1.1
2,858,865	-		DZA65_RS13345	0.19	+0.4
2,858,869	+		DZA65_RS13345	0.20	+1.0
2,858,869	+		DZA65_RS13345	0.20	+0.8
2,858,869	+		DZA65_RS13345	0.20	+0.6
2,858,869	+		DZA65_RS13345	0.20	-0.1
2,858,869	+		DZA65_RS13345	0.20	+0.2
2,858,869	+		DZA65_RS13345	0.20	+0.8
2,858,869	+		DZA65_RS13345	0.20	-2.2
2,858,869	+		DZA65_RS13345	0.20	+0.3
2,858,869	+		DZA65_RS13345	0.20	+0.4
2,858,870	-		DZA65_RS13345	0.20	+0.7
2,858,870	-		DZA65_RS13345	0.20	-0.6
2,858,870	-		DZA65_RS13345	0.20	-0.6
2,858,870	-		DZA65_RS13345	0.20	+0.3
2,858,870	-		DZA65_RS13345	0.20	-1.6
2,858,870	-		DZA65_RS13345	0.20	+2.1
2,858,870	-		DZA65_RS13345	0.20	+0.7
2,858,870	-		DZA65_RS13345	0.20	-0.4
2,858,870	-		DZA65_RS13345	0.20	-0.9
2,858,870	-		DZA65_RS13345	0.20	+0.3
2,858,870	-		DZA65_RS13345	0.20	-0.1
2,858,870	-		DZA65_RS13345	0.20	-0.3
2,858,871	+		DZA65_RS13345	0.20	+0.0
2,858,871	+		DZA65_RS13345	0.20	-0.3
2,858,871	+		DZA65_RS13345	0.20	+0.1
2,858,871	+		DZA65_RS13345	0.20	+0.5
2,858,871	+		DZA65_RS13345	0.20	+0.6
2,858,871	+		DZA65_RS13345	0.20	+0.1
2,858,872	-		DZA65_RS13345	0.20	+0.1
2,858,872	-		DZA65_RS13345	0.20	-0.7
2,858,872	-		DZA65_RS13345	0.20	+0.3
2,858,872	-		DZA65_RS13345	0.20	+0.3
2,858,872	-		DZA65_RS13345	0.20	+1.2
2,858,872	-		DZA65_RS13345	0.20	+0.6
2,858,872	-		DZA65_RS13345	0.20	+0.0
2,858,872	-		DZA65_RS13345	0.20	-0.7
2,858,872	-		DZA65_RS13345	0.20	-0.2
2,858,872	-		DZA65_RS13345	0.20	-0.0
2,858,904	+		DZA65_RS13345	0.24	-0.1
2,858,904	+		DZA65_RS13345	0.24	+0.4
2,858,904	+		DZA65_RS13345	0.24	+0.8
2,858,904	+		DZA65_RS13345	0.24	+0.1
2,858,905	-		DZA65_RS13345	0.24	+0.7
2,858,905	-		DZA65_RS13345	0.24	-0.5
2,858,933	+		DZA65_RS13345	0.28	+0.4
2,859,069	+		DZA65_RS13345	0.44	-0.2
2,859,069	+		DZA65_RS13345	0.44	-0.2
2,859,069	+		DZA65_RS13345	0.44	+1.1
2,859,070	-		DZA65_RS13345	0.44	-0.3
2,859,081	-		DZA65_RS13345	0.46	+0.2
2,859,198	+		DZA65_RS13345	0.60	-0.7
2,859,199	-		DZA65_RS13345	0.60	-0.6
2,859,234	+		DZA65_RS13345	0.64	+0.0
2,859,234	+		DZA65_RS13345	0.64	+0.8
2,859,234	+		DZA65_RS13345	0.64	+0.2
2,859,234	+		DZA65_RS13345	0.64	-0.1
2,859,235	-		DZA65_RS13345	0.64	+0.3
2,859,235	-		DZA65_RS13345	0.64	+1.3
2,859,235	-		DZA65_RS13345	0.64	+1.2
2,859,235	-		DZA65_RS13345	0.64	+0.7
2,859,235	-		DZA65_RS13345	0.64	+0.8
2,859,235	-		DZA65_RS13345	0.64	+0.6