Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS15940

Experiment: M9+starch

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+starch
3,457,823	-		DZA65_RS15935	0.21	+0.9
3,457,830	+		DZA65_RS15935	0.22	-1.0
3,457,830	+		DZA65_RS15935	0.22	-2.0
3,457,830	+		DZA65_RS15935	0.22	-0.9
3,457,830	+		DZA65_RS15935	0.22	-0.5
3,457,830	+		DZA65_RS15935	0.22	+0.2
3,457,830	+		DZA65_RS15935	0.22	+0.7
3,457,831	-		DZA65_RS15935	0.22	-0.6
3,457,831	-		DZA65_RS15935	0.22	-0.4
3,457,831	-		DZA65_RS15935	0.22	-1.0
3,457,831	-		DZA65_RS15935	0.22	+0.5
3,457,831	-		DZA65_RS15935	0.22	+0.4
3,457,831	-		DZA65_RS15935	0.22	-0.8
3,457,831	-		DZA65_RS15935	0.22	-1.4
3,457,848	+		DZA65_RS15935	0.24	+0.4
3,457,848	+		DZA65_RS15935	0.24	-0.3
3,457,849	-		DZA65_RS15935	0.24	-0.8
3,457,849	-		DZA65_RS15935	0.24	-0.4
3,457,849	-		DZA65_RS15935	0.24	+1.1
3,457,849	-		DZA65_RS15935	0.24	+2.4
3,457,849	-		DZA65_RS15935	0.24	+1.5
3,457,849	-		DZA65_RS15935	0.24	+0.7
3,457,889	+		DZA65_RS15935	0.29	+1.8
3,457,889	+		DZA65_RS15935	0.29	-0.7
3,457,889	+		DZA65_RS15935	0.29	+0.0
3,457,889	+		DZA65_RS15935	0.29	-0.3
3,457,890	-		DZA65_RS15935	0.29	+0.6
3,457,890	-		DZA65_RS15935	0.29	+0.1
3,457,890	-		DZA65_RS15935	0.29	+1.0
3,457,890	-		DZA65_RS15935	0.29	-0.5
3,457,893	+		DZA65_RS15935	0.29	-0.6
3,457,893	+		DZA65_RS15935	0.29	-0.6
3,457,893	+		DZA65_RS15935	0.29	+0.2
3,457,893	+		DZA65_RS15935	0.29	-1.6
3,457,893	+		DZA65_RS15935	0.29	-0.6
3,457,894	-		DZA65_RS15935	0.29	+0.4
3,457,894	-		DZA65_RS15935	0.29	+0.3
3,457,894	-		DZA65_RS15935	0.29	-0.4
3,457,894	-		DZA65_RS15935	0.29	+0.6
3,457,894	-		DZA65_RS15935	0.29	-0.0
3,457,894	-		DZA65_RS15935	0.29	+0.6
3,457,894	-		DZA65_RS15935	0.29	+1.5
3,457,917	+		DZA65_RS15935	0.32	+0.0
3,457,925	+		DZA65_RS15935	0.33	-2.0
3,458,007	+		DZA65_RS15935	0.42	+0.6
3,458,051	+		DZA65_RS15935	0.47	-0.6
3,458,051	+		DZA65_RS15935	0.47	-2.0
3,458,051	+		DZA65_RS15935	0.47	-0.6
3,458,052	-		DZA65_RS15935	0.47	+0.2
3,458,130	+		DZA65_RS15935	0.56	-1.2
3,458,130	+		DZA65_RS15935	0.56	-0.4
3,458,131	-		DZA65_RS15935	0.56	+0.8
3,458,138	+		DZA65_RS15935	0.57	+0.0
3,458,138	+		DZA65_RS15935	0.57	-0.2
3,458,208	+		DZA65_RS15935	0.65	-1.2
3,458,209	-		DZA65_RS15935	0.65	+0.6
3,458,209	-		DZA65_RS15935	0.65	+1.5
3,458,209	-		DZA65_RS15935	0.65	-0.8
3,458,322	+		DZA65_RS15935	0.78	-0.0
3,458,322	+		DZA65_RS15935	0.78	+0.8
3,458,322	+		DZA65_RS15935	0.78	+1.4
3,458,322	+		DZA65_RS15935	0.78	-0.7
3,458,322	+		DZA65_RS15935	0.78	-0.2
3,458,338	+		DZA65_RS15935	0.80	+0.4
3,458,339	-		DZA65_RS15935	0.80	+1.0
3,458,342	+		DZA65_RS15935	0.81	+1.1
3,458,342	+		DZA65_RS15935	0.81	+0.4
3,458,342	+		DZA65_RS15935	0.81	-0.4
3,458,342	+		DZA65_RS15935	0.81	+0.1
3,458,342	+		DZA65_RS15935	0.81	+1.1
3,458,342	+		DZA65_RS15935	0.81	-3.2
3,458,342	+		DZA65_RS15935	0.81	+0.2
3,458,343	-		DZA65_RS15935	0.81	+0.6
3,458,343	-		DZA65_RS15935	0.81	-2.0
3,458,343	-		DZA65_RS15935	0.81	+0.6
3,458,343	-				+0.4
3,458,343	-		DZA65_RS15935	0.81	-1.4
3,458,343	-		DZA65_RS15935	0.81	-1.2
3,458,343	-		DZA65_RS15935	0.81	+1.4
3,458,365	-		DZA65_RS15935	0.83	-0.4
3,458,427	+				-0.6
3,458,433	+				+0.1
3,458,433	+				-0.8
3,458,433	+				-2.0
3,458,433	+				-0.0
3,458,433	+				-1.1
3,458,433	+				+1.4
3,458,433	+				+0.4
3,458,433	+				+1.2
3,458,433	+				-0.0
3,458,433	+				+0.2
3,458,434	-				-1.5
3,458,434	-				+0.7
3,458,434	-				+0.0
3,458,434	-				-0.5
3,458,434	-				+0.1
3,458,434	-				+1.2
3,458,434	-				-0.0
3,458,434	-				+1.1
3,458,434	-				+0.6
3,458,480	+				-0.3
3,458,480	+				-1.0
3,458,481	-				-2.0
3,458,481	-				+0.2
3,458,481	-				+0.4
3,458,481	-				+0.7
3,458,481	-				+1.8
3,458,482	+				+1.2
3,458,482	+				-0.3
3,458,482	+				-3.7
3,458,482	+				-0.1
3,458,482	+				-0.4
3,458,483	-				+0.4
3,458,483	-				+0.6
3,458,483	-				+3.5
3,458,483	-				-0.7
3,458,486	+				-0.6
3,458,486	+				+0.9
3,458,486	+				-0.2
3,458,486	+				+0.2
3,458,486	+				-0.2
3,458,486	+				-0.0
3,458,486	+				-1.2
3,458,486	+				-0.3
3,458,487	-				+1.4
3,458,487	-				-0.8
3,458,487	-				-1.4
3,458,487	-				-0.1
3,458,487	-				+0.4
3,458,487	-				+0.1
3,458,487	-				-0.6
3,458,487	-				-1.0
3,458,487	-				-0.2
3,458,620	+				+1.0
3,458,664	+				+1.4
3,458,664	+				-0.3
3,458,674	+				-0.0
3,458,674	+				-0.9
3,458,674	+				-0.2
3,458,674	+				-0.2
3,458,674	+				-0.0
3,458,674	+				-1.2
3,458,675	-				-2.0
3,458,675	-				+0.1
3,458,683	+				+0.4
3,458,683	+				+0.4
3,458,683	+				-0.6
3,458,683	+				-0.4
3,458,683	+				-1.4
3,458,684	-				+0.1
3,458,684	-				-1.2
3,458,684	-				+1.1
3,458,684	-				-1.6
3,458,684	-				-0.8
3,458,684	-				-0.6
3,458,684	-				-0.4
3,458,684	-				-0.6
3,458,684	-				-0.1
3,458,684	-				+0.2
3,458,684	-				-1.2
3,458,684	-				+0.8
3,458,728	+				+0.6
3,458,728	+				-1.2
3,458,728	+				+1.5
3,458,729	-				-0.0
3,458,767	-				+1.0
3,458,768	+				+0.3
3,458,780	-				-0.4
3,458,787	+				-0.8
3,458,953	-		DZA65_RS15940	0.12	+0.4
3,458,953	-		DZA65_RS15940	0.12	-0.2
3,458,957	+		DZA65_RS15940	0.12	+0.3
3,458,957	+		DZA65_RS15940	0.12	-2.0
3,458,957	+		DZA65_RS15940	0.12	-1.3
3,458,957	+		DZA65_RS15940	0.12	-1.8
3,458,957	+		DZA65_RS15940	0.12	+0.0
3,458,958	-		DZA65_RS15940	0.12	+0.0
3,458,958	-		DZA65_RS15940	0.12	-0.5
3,458,958	-		DZA65_RS15940	0.12	+1.4
3,458,994	+		DZA65_RS15940	0.15	-0.7
3,458,995	-		DZA65_RS15940	0.15	-0.2
3,459,078	+		DZA65_RS15940	0.22	-0.2
3,459,078	+		DZA65_RS15940	0.22	-0.3
3,459,078	+		DZA65_RS15940	0.22	-0.4
3,459,078	+		DZA65_RS15940	0.22	-0.6
3,459,079	-		DZA65_RS15940	0.22	+1.1
3,459,082	+		DZA65_RS15940	0.22	-0.6
3,459,082	+		DZA65_RS15940	0.22	-1.0
3,459,082	+		DZA65_RS15940	0.22	-0.6
3,459,082	+		DZA65_RS15940	0.22	-0.6
3,459,083	-		DZA65_RS15940	0.23	-2.3
3,459,083	-		DZA65_RS15940	0.23	+0.4
3,459,083	-		DZA65_RS15940	0.23	-0.1
3,459,121	-		DZA65_RS15940	0.26	+0.9
3,459,476	+		DZA65_RS15940	0.55	+1.6
3,459,476	+		DZA65_RS15940	0.55	-1.0
3,459,476	+		DZA65_RS15940	0.55	+0.7
3,459,477	-		DZA65_RS15940	0.55	-0.0
3,459,539	+		DZA65_RS15940	0.60	+0.1
3,459,540	-		DZA65_RS15940	0.60	-0.1
3,459,540	-		DZA65_RS15940	0.60	+1.4
3,459,674	-		DZA65_RS15940	0.71	-1.1
3,459,676	+		DZA65_RS15940	0.71	-0.2
3,459,676	+		DZA65_RS15940	0.71	+1.2
3,459,677	-		DZA65_RS15940	0.71	-0.2
3,459,677	-		DZA65_RS15940	0.71	+1.7
3,459,677	-		DZA65_RS15940	0.71	-0.6
3,459,677	-		DZA65_RS15940	0.71	-0.2
3,459,929	+				-0.2
3,460,031	+				-0.1
3,460,037	+				-0.2
3,460,038	-				-0.0
3,460,038	-				-0.0
3,460,038	-				+0.2
3,460,116	-		DZA65_RS15945	0.12	-0.6
3,460,116	-		DZA65_RS15945	0.12	+1.1
3,460,116	-		DZA65_RS15945	0.12	-1.0
3,460,155	-		DZA65_RS15945	0.17	+0.7
3,460,167	+				+1.2
3,460,167	+		DZA65_RS15945	0.18	-1.0
3,460,212	+		DZA65_RS15945	0.24	-0.8
3,460,212	+		DZA65_RS15945	0.24	-0.0
3,460,263	+		DZA65_RS15945	0.30	-0.7
3,460,263	+		DZA65_RS15945	0.30	+1.7
3,460,263	+		DZA65_RS15945	0.30	+0.1
3,460,263	+		DZA65_RS15945	0.30	-1.2
3,460,263	+		DZA65_RS15945	0.30	-1.2
3,460,263	+		DZA65_RS15945	0.30	-0.6
3,460,263	+		DZA65_RS15945	0.30	-0.6
3,460,264	-		DZA65_RS15945	0.30	+0.4
3,460,264	-		DZA65_RS15945	0.30	-2.4
3,460,264	-		DZA65_RS15945	0.30	+0.4
3,460,265	+		DZA65_RS15945	0.31	+2.0
3,460,265	+		DZA65_RS15945	0.31	-0.3
3,460,265	+		DZA65_RS15945	0.31	+0.4
3,460,266	-		DZA65_RS15945	0.31	-2.0
3,460,266	-		DZA65_RS15945	0.31	+0.1
3,460,266	-		DZA65_RS15945	0.31	-1.3
3,460,387	-		DZA65_RS15945	0.46	+0.4
3,460,387	-		DZA65_RS15945	0.46	+2.0
3,460,438	-		DZA65_RS15945	0.52	-1.2
3,460,629	+		DZA65_RS15945	0.76	-0.3
3,460,629	+		DZA65_RS15945	0.76	+1.3
3,460,629	+		DZA65_RS15945	0.76	-0.6
3,460,629	+		DZA65_RS15945	0.76	+1.6
3,460,629	+		DZA65_RS15945	0.76	-0.2
3,460,697	+		DZA65_RS15945	0.85	-0.2
3,460,697	+		DZA65_RS15945	0.85	-0.8
3,460,697	+		DZA65_RS15945	0.85	+0.1
3,460,698	-		DZA65_RS15945	0.85	-1.4
3,460,698	-		DZA65_RS15945	0.85	+1.0
3,460,698	-		DZA65_RS15945	0.85	+0.5
3,460,698	-		DZA65_RS15945	0.85	+0.6
3,460,698	-		DZA65_RS15945	0.85	-0.7
3,460,698	-		DZA65_RS15945	0.85	+0.4
3,460,698	-		DZA65_RS15945	0.85	+0.2
3,460,701	+		DZA65_RS15945	0.85	+0.1
3,460,701	+		DZA65_RS15945	0.85	+1.0
3,460,701	+		DZA65_RS15945	0.85	+0.2
3,460,701	+		DZA65_RS15945	0.85	-0.2
3,460,701	+		DZA65_RS15945	0.85	-0.0
3,460,701	+		DZA65_RS15945	0.85	-0.4
3,460,701	+		DZA65_RS15945	0.85	+1.1
3,460,701	+		DZA65_RS15945	0.85	-2.4
3,460,701	+		DZA65_RS15945	0.85	-0.6
3,460,702	-		DZA65_RS15945	0.85	+0.1
3,460,702	-		DZA65_RS15945	0.85	-1.2
3,460,702	-		DZA65_RS15945	0.85	+0.1
3,460,702	-		DZA65_RS15945	0.85	-0.6
3,460,702	-		DZA65_RS15945	0.85	-1.0
3,460,702	-		DZA65_RS15945	0.85	-1.2
3,460,702	-		DZA65_RS15945	0.85	-0.6
3,460,702	-		DZA65_RS15945	0.85	+0.2
3,460,702	-		DZA65_RS15945	0.85	-0.3
3,460,702	-				-0.0
3,460,702	-		DZA65_RS15945	0.85	+0.4
3,460,702	-		DZA65_RS15945	0.85	-0.0
3,460,777	+				+0.4
3,460,777	+				+0.4
3,460,778	-				-0.6
3,460,778	-				+0.9
3,460,778	-				+0.4
3,460,778	-				+0.8
3,460,778	-				-2.4
3,460,778	-				-1.1
3,460,809	+				-1.2
3,460,809	+				-0.5
3,460,810	-				+0.4