Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS09955

Experiment: M9+sucrose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+sucrose
2,102,989	+		DZA65_RS09950	0.12	-0.1
2,102,990	-		DZA65_RS09950	0.12	-0.0
2,103,034	-		DZA65_RS09950	0.17	-1.7
2,103,050	+		DZA65_RS09950	0.19	+0.7
2,103,096	+		DZA65_RS09950	0.24	+0.1
2,103,097	-		DZA65_RS09950	0.24	-0.1
2,103,130	+		DZA65_RS09950	0.28	-0.5
2,103,131	-		DZA65_RS09950	0.28	-0.2
2,103,205	+		DZA65_RS09950	0.37	+2.0
2,103,217	+		DZA65_RS09950	0.38	+1.2
2,103,218	-		DZA65_RS09950	0.38	-0.6
2,103,218	-		DZA65_RS09950	0.38	-1.2
2,103,218	-		DZA65_RS09950	0.38	+0.1
2,103,341	+		DZA65_RS09950	0.52	+0.4
2,103,396	+		DZA65_RS09950	0.58	-0.4
2,103,485	+		DZA65_RS09950	0.68	+0.1
2,103,485	+		DZA65_RS09950	0.68	+0.3
2,103,486	-		DZA65_RS09950	0.69	+0.9
2,103,486	-		DZA65_RS09950	0.69	-0.7
2,103,486	-		DZA65_RS09950	0.69	+0.9
2,103,528	+		DZA65_RS09950	0.73	+0.7
2,103,529	-		DZA65_RS09950	0.74	-0.1
2,103,529	-		DZA65_RS09950	0.74	-0.1
2,103,529	-		DZA65_RS09950	0.74	+2.7
2,103,529	-		DZA65_RS09950	0.74	-1.7
2,103,529	-		DZA65_RS09950	0.74	+0.7
2,103,529	-		DZA65_RS09950	0.74	+0.2
2,103,681	+				-0.7
2,103,682	-				+0.5
2,103,682	-				-1.7
2,103,682	-				-1.5
2,103,682	-				-1.8
2,103,755	+				+0.7
2,103,756	-				-0.1
2,103,763	+				-0.9
2,103,763	+				-0.0
2,103,763	+				+0.1
2,103,763	+				+0.7
2,103,764	-				+1.8
2,103,766	+				+0.3
2,103,766	+				-0.3
2,103,767	-				+2.2
2,103,767	-				+0.2
2,103,767	-				+0.0
2,103,767	-				+0.2
2,103,875	-				+0.1
2,103,875	-				+0.0
2,103,875	-				+0.9
2,103,955	+		DZA65_RS09955	0.10	-0.8
2,104,005	+		DZA65_RS09955	0.16	-1.9
2,104,005	+		DZA65_RS09955	0.16	+0.3
2,104,005	+				+0.7
2,104,005	+		DZA65_RS09955	0.16	-0.3
2,104,006	-		DZA65_RS09955	0.16	-0.6
2,104,006	-		DZA65_RS09955	0.16	-0.6
2,104,008	+		DZA65_RS09955	0.16	-0.3
2,104,008	+		DZA65_RS09955	0.16	-0.5
2,104,008	+		DZA65_RS09955	0.16	+0.6
2,104,008	+		DZA65_RS09955	0.16	-0.0
2,104,008	+		DZA65_RS09955	0.16	-0.6
2,104,008	+		DZA65_RS09955	0.16	-0.3
2,104,009	-		DZA65_RS09955	0.16	+0.1
2,104,009	-		DZA65_RS09955	0.16	-1.7
2,104,009	-		DZA65_RS09955	0.16	-1.3
2,104,009	-		DZA65_RS09955	0.16	-1.3
2,104,009	-		DZA65_RS09955	0.16	-1.2
2,104,056	+		DZA65_RS09955	0.21	-1.3
2,104,199	+		DZA65_RS09955	0.37	+0.2
2,104,370	+		DZA65_RS09955	0.56	-1.8
2,104,371	-		DZA65_RS09955	0.56	-0.3
2,104,420	+		DZA65_RS09955	0.61	-0.0
2,104,420	+		DZA65_RS09955	0.61	-0.8
2,104,420	+		DZA65_RS09955	0.61	-0.3
2,104,421	-		DZA65_RS09955	0.61	+0.3
2,104,421	-		DZA65_RS09955	0.61	+0.7
2,104,421	-		DZA65_RS09955	0.61	+1.0
2,104,421	-		DZA65_RS09955	0.61	+0.8
2,104,421	-		DZA65_RS09955	0.61	+0.1
2,104,433	+		DZA65_RS09955	0.63	-1.7
2,104,433	+		DZA65_RS09955	0.63	-0.8
2,104,433	+		DZA65_RS09955	0.63	-1.1
2,104,433	+		DZA65_RS09955	0.63	-0.3
2,104,433	+		DZA65_RS09955	0.63	+0.4
2,104,433	+		DZA65_RS09955	0.63	+0.3
2,104,433	+		DZA65_RS09955	0.63	+1.1
2,104,434	-		DZA65_RS09955	0.63	+0.7
2,104,434	-		DZA65_RS09955	0.63	-0.7
2,104,465	+		DZA65_RS09955	0.66	+0.3
2,104,511	-		DZA65_RS09955	0.71	-0.7
2,104,563	+		DZA65_RS09955	0.77	-0.2
2,104,563	+		DZA65_RS09955	0.77	-2.7
2,104,563	+				-0.9
2,104,564	-		DZA65_RS09955	0.77	+0.3
2,104,564	-		DZA65_RS09955	0.77	-0.1
2,104,564	-		DZA65_RS09955	0.77	-0.3
2,104,564	-		DZA65_RS09955	0.77	+0.7
2,104,564	-		DZA65_RS09955	0.77	+1.2
2,104,564	-		DZA65_RS09955	0.77	+1.1
2,104,564	-		DZA65_RS09955	0.77	+1.0
2,104,616	-		DZA65_RS09955	0.83	-0.7
2,104,658	+		DZA65_RS09955	0.87	+0.6
2,104,658	+		DZA65_RS09955	0.87	+0.1
2,104,658	+		DZA65_RS09955	0.87	+1.5
2,104,658	+		DZA65_RS09955	0.87	-0.7
2,104,659	-		DZA65_RS09955	0.88	-0.8
2,104,659	-		DZA65_RS09955	0.88	+0.1
2,104,667	+		DZA65_RS09955	0.88	+0.3
2,104,668	-		DZA65_RS09955	0.89	+0.1
2,104,668	-		DZA65_RS09955	0.89	+1.1
2,104,770	-				-1.9
2,104,911	+				+0.2
2,104,912	-				+0.2
2,104,912	-				-0.9
2,104,913	+				-0.7
2,104,914	-				+0.1
2,104,927	+				-0.3
2,104,927	+				-0.3
2,104,927	+				+0.7
2,104,928	-				-1.3
2,104,928	-				-0.5
2,104,955	+				-2.1
2,104,955	+				+0.1
2,104,955	+				-1.3
2,104,956	-				-0.4
2,104,979	+				+0.7
2,104,980	-				-1.5
2,105,000	+				+0.5
2,105,001	-				+0.7
2,105,001	-				-0.9
2,105,049	+		DZA65_RS09960	0.13	-0.6
2,105,081	-		DZA65_RS09960	0.16	-0.9
2,105,103	+		DZA65_RS09960	0.17	+1.7
2,105,103	+		DZA65_RS09960	0.17	+0.8
2,105,121	+		DZA65_RS09960	0.19	-0.1
2,105,121	+		DZA65_RS09960	0.19	+1.7
2,105,122	-		DZA65_RS09960	0.19	-0.3
2,105,122	-		DZA65_RS09960	0.19	+0.1
2,105,122	-		DZA65_RS09960	0.19	+0.5
2,105,122	-		DZA65_RS09960	0.19	+0.4
2,105,122	-		DZA65_RS09960	0.19	-0.1
2,105,124	+		DZA65_RS09960	0.19	-0.1
2,105,124	+		DZA65_RS09960	0.19	-0.3
2,105,124	+		DZA65_RS09960	0.19	-0.5
2,105,124	+		DZA65_RS09960	0.19	-0.5
2,105,125	-		DZA65_RS09960	0.19	+0.2
2,105,125	-		DZA65_RS09960	0.19	-0.5
2,105,125	-		DZA65_RS09960	0.19	-0.1
2,105,125	-		DZA65_RS09960	0.19	-0.4
2,105,125	-		DZA65_RS09960	0.19	-0.2
2,105,270	+		DZA65_RS09960	0.32	+1.2
2,105,270	+		DZA65_RS09960	0.32	+0.2
2,105,304	+		DZA65_RS09960	0.35	+0.9
2,105,305	-		DZA65_RS09960	0.35	-1.1
2,105,316	+		DZA65_RS09960	0.36	+1.4
2,105,316	+		DZA65_RS09960	0.36	-1.1
2,105,317	-		DZA65_RS09960	0.36	+0.6
2,105,317	-		DZA65_RS09960	0.36	-0.4
2,105,319	+		DZA65_RS09960	0.36	-2.5
2,105,319	+		DZA65_RS09960	0.36	-0.0
2,105,320	-		DZA65_RS09960	0.36	+1.7
2,105,320	-		DZA65_RS09960	0.36	+0.7
2,105,320	-		DZA65_RS09960	0.36	-0.9
2,105,333	-		DZA65_RS09960	0.38	-0.1
2,105,333	-		DZA65_RS09960	0.38	-0.7
2,105,333	-		DZA65_RS09960	0.38	+0.7
2,105,333	-		DZA65_RS09960	0.38	+0.4
2,105,335	+		DZA65_RS09960	0.38	-0.8
2,105,483	+		DZA65_RS09960	0.51	-0.3
2,105,483	+		DZA65_RS09960	0.51	-1.3
2,105,483	+		DZA65_RS09960	0.51	+0.1
2,105,483	+		DZA65_RS09960	0.51	-0.5
2,105,483	+		DZA65_RS09960	0.51	-0.1
2,105,484	-		DZA65_RS09960	0.51	-0.6
2,105,484	-		DZA65_RS09960	0.51	+0.2
2,105,484	-		DZA65_RS09960	0.51	-1.9
2,105,527	+		DZA65_RS09960	0.54	-0.1
2,105,527	+		DZA65_RS09960	0.54	-0.3
2,105,527	+		DZA65_RS09960	0.54	+1.1
2,105,528	-		DZA65_RS09960	0.54	+0.2
2,105,556	+		DZA65_RS09960	0.57	+0.0
2,105,556	+		DZA65_RS09960	0.57	+0.7
2,105,556	+		DZA65_RS09960	0.57	-0.3
2,105,557	-		DZA65_RS09960	0.57	+0.0
2,105,574	+		DZA65_RS09960	0.58	-0.5
2,105,574	+		DZA65_RS09960	0.58	+0.4
2,105,574	+		DZA65_RS09960	0.58	+0.9
2,105,575	-		DZA65_RS09960	0.59	+0.7
2,105,643	-		DZA65_RS09960	0.64	+1.2
2,105,741	+		DZA65_RS09960	0.73	+1.0
2,105,742	-		DZA65_RS09960	0.73	+0.8
2,105,744	-		DZA65_RS09960	0.73	-0.6
2,105,761	-		DZA65_RS09960	0.75	+1.2