Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS15945

Experiment: M9+sucrose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+sucrose
3,459,078	+		DZA65_RS15940	0.22	+0.9
3,459,078	+		DZA65_RS15940	0.22	-1.5
3,459,078	+		DZA65_RS15940	0.22	-0.3
3,459,078	+		DZA65_RS15940	0.22	+0.5
3,459,079	-		DZA65_RS15940	0.22	-0.5
3,459,082	+		DZA65_RS15940	0.22	-0.5
3,459,082	+		DZA65_RS15940	0.22	-0.8
3,459,082	+		DZA65_RS15940	0.22	+0.5
3,459,082	+		DZA65_RS15940	0.22	-0.5
3,459,083	-		DZA65_RS15940	0.23	-0.2
3,459,083	-		DZA65_RS15940	0.23	-0.3
3,459,083	-		DZA65_RS15940	0.23	+0.7
3,459,121	-		DZA65_RS15940	0.26	+1.1
3,459,476	+		DZA65_RS15940	0.55	+1.0
3,459,476	+		DZA65_RS15940	0.55	+0.3
3,459,476	+		DZA65_RS15940	0.55	+0.5
3,459,477	-		DZA65_RS15940	0.55	+0.2
3,459,539	+		DZA65_RS15940	0.60	+0.6
3,459,540	-		DZA65_RS15940	0.60	+0.5
3,459,540	-		DZA65_RS15940	0.60	+1.5
3,459,674	-		DZA65_RS15940	0.71	+0.4
3,459,676	+		DZA65_RS15940	0.71	+0.8
3,459,676	+		DZA65_RS15940	0.71	-0.0
3,459,677	-		DZA65_RS15940	0.71	+0.5
3,459,677	-		DZA65_RS15940	0.71	-0.1
3,459,677	-		DZA65_RS15940	0.71	+0.5
3,459,677	-		DZA65_RS15940	0.71	-0.3
3,459,929	+				+0.2
3,460,031	+				-0.1
3,460,037	+				+1.6
3,460,038	-				+0.3
3,460,038	-				+0.8
3,460,038	-				+0.2
3,460,116	-		DZA65_RS15945	0.12	+0.5
3,460,116	-		DZA65_RS15945	0.12	-0.7
3,460,116	-		DZA65_RS15945	0.12	-0.8
3,460,155	-		DZA65_RS15945	0.17	-2.3
3,460,167	+				-1.8
3,460,167	+		DZA65_RS15945	0.18	-0.2
3,460,212	+		DZA65_RS15945	0.24	+0.1
3,460,212	+		DZA65_RS15945	0.24	-0.5
3,460,263	+		DZA65_RS15945	0.30	-0.4
3,460,263	+		DZA65_RS15945	0.30	-0.5
3,460,263	+		DZA65_RS15945	0.30	+0.9
3,460,263	+		DZA65_RS15945	0.30	+0.5
3,460,263	+		DZA65_RS15945	0.30	-0.1
3,460,263	+		DZA65_RS15945	0.30	-0.5
3,460,263	+		DZA65_RS15945	0.30	+0.5
3,460,264	-		DZA65_RS15945	0.30	+0.2
3,460,264	-		DZA65_RS15945	0.30	-2.3
3,460,264	-		DZA65_RS15945	0.30	+0.5
3,460,265	+		DZA65_RS15945	0.31	-0.1
3,460,265	+		DZA65_RS15945	0.31	-0.1
3,460,265	+		DZA65_RS15945	0.31	+1.6
3,460,266	-		DZA65_RS15945	0.31	+1.0
3,460,266	-		DZA65_RS15945	0.31	-1.0
3,460,266	-		DZA65_RS15945	0.31	-0.7
3,460,387	-		DZA65_RS15945	0.46	+0.5
3,460,387	-		DZA65_RS15945	0.46	+2.5
3,460,438	-		DZA65_RS15945	0.52	-1.1
3,460,629	+		DZA65_RS15945	0.76	-0.3
3,460,629	+		DZA65_RS15945	0.76	+0.1
3,460,629	+		DZA65_RS15945	0.76	+1.5
3,460,629	+		DZA65_RS15945	0.76	+0.5
3,460,629	+		DZA65_RS15945	0.76	-1.1
3,460,697	+		DZA65_RS15945	0.85	-0.5
3,460,697	+		DZA65_RS15945	0.85	-0.7
3,460,697	+		DZA65_RS15945	0.85	+0.2
3,460,698	-		DZA65_RS15945	0.85	-0.8
3,460,698	-		DZA65_RS15945	0.85	-1.1
3,460,698	-		DZA65_RS15945	0.85	+0.6
3,460,698	-		DZA65_RS15945	0.85	-0.5
3,460,698	-		DZA65_RS15945	0.85	-1.2
3,460,698	-		DZA65_RS15945	0.85	+1.5
3,460,698	-		DZA65_RS15945	0.85	+0.7
3,460,701	+		DZA65_RS15945	0.85	-0.3
3,460,701	+		DZA65_RS15945	0.85	+1.5
3,460,701	+		DZA65_RS15945	0.85	+0.2
3,460,701	+		DZA65_RS15945	0.85	+0.1
3,460,701	+		DZA65_RS15945	0.85	-0.1
3,460,701	+		DZA65_RS15945	0.85	-0.2
3,460,701	+		DZA65_RS15945	0.85	+0.9
3,460,701	+		DZA65_RS15945	0.85	-1.3
3,460,701	+		DZA65_RS15945	0.85	-1.5
3,460,702	-		DZA65_RS15945	0.85	-1.1
3,460,702	-		DZA65_RS15945	0.85	-0.9
3,460,702	-		DZA65_RS15945	0.85	-0.0
3,460,702	-		DZA65_RS15945	0.85	+0.5
3,460,702	-		DZA65_RS15945	0.85	-0.1
3,460,702	-		DZA65_RS15945	0.85	+0.1
3,460,702	-		DZA65_RS15945	0.85	+0.5
3,460,702	-		DZA65_RS15945	0.85	+0.3
3,460,702	-		DZA65_RS15945	0.85	-0.5
3,460,702	-				+0.1
3,460,702	-		DZA65_RS15945	0.85	-1.1
3,460,702	-		DZA65_RS15945	0.85	-0.9
3,460,777	+				+1.5
3,460,777	+				-0.2
3,460,778	-				+0.2
3,460,778	-				-0.8
3,460,778	-				+0.9
3,460,778	-				-1.1
3,460,778	-				+0.0
3,460,778	-				-0.3
3,460,809	+				+1.2
3,460,809	+				-0.2
3,460,810	-				+0.0
3,461,080	+		DZA65_RS15950	0.15	-0.1
3,461,080	+		DZA65_RS15950	0.15	-1.1
3,461,080	+		DZA65_RS15950	0.15	-1.0
3,461,080	+		DZA65_RS15950	0.15	+0.1
3,461,080	+		DZA65_RS15950	0.15	+0.5
3,461,080	+		DZA65_RS15950	0.15	-0.7
3,461,081	-		DZA65_RS15950	0.15	-1.5
3,461,081	-		DZA65_RS15950	0.15	-1.2
3,461,146	+		DZA65_RS15950	0.19	+0.5
3,461,149	+		DZA65_RS15950	0.19	-1.1
3,461,149	+		DZA65_RS15950	0.19	-0.4
3,461,149	+		DZA65_RS15950	0.19	+0.5
3,461,150	-		DZA65_RS15950	0.19	+0.1
3,461,150	-		DZA65_RS15950	0.19	+0.2
3,461,150	-		DZA65_RS15950	0.19	+0.7
3,461,155	+		DZA65_RS15950	0.19	-1.3
3,461,156	-		DZA65_RS15950	0.19	-0.4
3,461,156	-		DZA65_RS15950	0.19	-0.5
3,461,156	-		DZA65_RS15950	0.19	+0.1
3,461,411	-		DZA65_RS15950	0.35	-0.1
3,461,411	-		DZA65_RS15950	0.35	-1.2
3,461,411	-		DZA65_RS15950	0.35	-1.0
3,461,457	+		DZA65_RS15950	0.37	-3.1
3,461,486	-		DZA65_RS15950	0.39	+0.6
3,461,560	+		DZA65_RS15950	0.44	+1.1
3,461,560	+		DZA65_RS15950	0.44	+1.2
3,461,561	-		DZA65_RS15950	0.44	+0.5
3,461,617	+		DZA65_RS15950	0.47	-2.1
3,461,618	-		DZA65_RS15950	0.47	+1.3
3,461,618	-		DZA65_RS15950	0.47	+0.4
3,461,636	-		DZA65_RS15950	0.48	-0.2
3,461,655	+		DZA65_RS15950	0.49	+0.5
3,461,655	+		DZA65_RS15950	0.49	-0.8
3,461,655	+		DZA65_RS15950	0.49	-0.5
3,461,655	+		DZA65_RS15950	0.49	-0.0
3,461,655	+		DZA65_RS15950	0.49	+0.2
3,461,655	+		DZA65_RS15950	0.49	-0.5
3,461,655	+		DZA65_RS15950	0.49	+0.4
3,461,655	+		DZA65_RS15950	0.49	+0.0
3,461,655	+		DZA65_RS15950	0.49	-0.8
3,461,656	-		DZA65_RS15950	0.49	+0.2
3,461,656	-		DZA65_RS15950	0.49	-1.3
3,461,656	-		DZA65_RS15950	0.49	-0.4
3,461,656	-		DZA65_RS15950	0.49	-0.5
3,461,656	-		DZA65_RS15950	0.49	+0.0