Experiment: M9+glucose+arginine
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HER17_RS00315 and HER17_RS00320 are separated by 392 nucleotides HER17_RS00320 and HER17_RS00325 are separated by 162 nucleotides
HER17_RS00315: HER17_RS00315 - valine--pyruvate transaminase, at 69,727 to 70,977
_RS00315
HER17_RS00320: HER17_RS00320 - aldose 1-epimerase family protein, at 71,370 to 72,578
_RS00320
HER17_RS00325: HER17_RS00325 - O-acetylserine/cysteine exporter, at 72,741 to 73,652
_RS00325
Position (kb) 71
72
73 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 70.478 kb on + strand, within HER17_RS00315 at 70.479 kb on - strand, within HER17_RS00315 at 70.483 kb on - strand, within HER17_RS00315 at 70.483 kb on - strand, within HER17_RS00315 at 70.566 kb on + strand, within HER17_RS00315 at 70.567 kb on - strand, within HER17_RS00315 at 70.567 kb on - strand, within HER17_RS00315 at 70.568 kb on + strand, within HER17_RS00315 at 70.568 kb on + strand, within HER17_RS00315 at 70.569 kb on - strand, within HER17_RS00315 at 70.569 kb on - strand, within HER17_RS00315 at 70.569 kb on - strand, within HER17_RS00315 at 70.628 kb on + strand, within HER17_RS00315 at 70.628 kb on + strand, within HER17_RS00315 at 70.628 kb on + strand, within HER17_RS00315 at 70.628 kb on + strand, within HER17_RS00315 at 70.628 kb on + strand, within HER17_RS00315 at 70.628 kb on + strand, within HER17_RS00315 at 70.629 kb on - strand, within HER17_RS00315 at 70.636 kb on - strand, within HER17_RS00315 at 70.636 kb on - strand, within HER17_RS00315 at 70.639 kb on + strand, within HER17_RS00315 at 70.639 kb on + strand, within HER17_RS00315 at 70.639 kb on + strand, within HER17_RS00315 at 70.640 kb on - strand, within HER17_RS00315 at 70.640 kb on - strand, within HER17_RS00315 at 70.680 kb on + strand, within HER17_RS00315 at 70.681 kb on - strand, within HER17_RS00315 at 70.714 kb on - strand, within HER17_RS00315 at 70.714 kb on - strand, within HER17_RS00315 at 70.747 kb on - strand, within HER17_RS00315 at 70.753 kb on - strand, within HER17_RS00315 at 70.753 kb on - strand, within HER17_RS00315 at 70.769 kb on + strand, within HER17_RS00315 at 70.770 kb on - strand, within HER17_RS00315 at 70.770 kb on - strand, within HER17_RS00315 at 70.832 kb on + strand, within HER17_RS00315 at 70.833 kb on - strand, within HER17_RS00315 at 70.833 kb on - strand, within HER17_RS00315 at 70.833 kb on - strand, within HER17_RS00315 at 70.894 kb on - strand at 70.894 kb on - strand at 70.921 kb on + strand at 70.977 kb on + strand at 70.977 kb on + strand at 70.982 kb on + strand at 70.982 kb on + strand at 70.982 kb on + strand at 70.983 kb on - strand at 71.020 kb on - strand at 71.035 kb on - strand at 71.101 kb on + strand at 71.102 kb on - strand at 71.118 kb on + strand at 71.119 kb on - strand at 71.286 kb on + strand at 71.388 kb on - strand at 71.396 kb on + strand at 71.396 kb on + strand at 71.567 kb on + strand, within HER17_RS00320 at 71.568 kb on - strand, within HER17_RS00320 at 71.644 kb on + strand, within HER17_RS00320 at 71.706 kb on - strand, within HER17_RS00320 at 71.820 kb on + strand, within HER17_RS00320 at 71.820 kb on + strand, within HER17_RS00320 at 71.820 kb on + strand, within HER17_RS00320 at 71.820 kb on + strand, within HER17_RS00320 at 71.820 kb on + strand, within HER17_RS00320 at 71.820 kb on + strand, within HER17_RS00320 at 71.821 kb on - strand, within HER17_RS00320 at 71.821 kb on - strand, within HER17_RS00320 at 71.821 kb on - strand, within HER17_RS00320 at 71.821 kb on - strand, within HER17_RS00320 at 71.821 kb on - strand, within HER17_RS00320 at 71.821 kb on - strand, within HER17_RS00320 at 71.970 kb on + strand, within HER17_RS00320 at 71.971 kb on - strand, within HER17_RS00320 at 72.027 kb on + strand, within HER17_RS00320 at 72.039 kb on + strand, within HER17_RS00320 at 72.048 kb on - strand, within HER17_RS00320 at 72.051 kb on + strand, within HER17_RS00320 at 72.051 kb on + strand, within HER17_RS00320 at 72.052 kb on - strand, within HER17_RS00320 at 72.129 kb on - strand, within HER17_RS00320 at 72.168 kb on + strand, within HER17_RS00320 at 72.169 kb on - strand, within HER17_RS00320 at 72.212 kb on + strand, within HER17_RS00320 at 72.237 kb on - strand, within HER17_RS00320 at 72.354 kb on + strand, within HER17_RS00320 at 72.354 kb on + strand, within HER17_RS00320 at 72.354 kb on + strand, within HER17_RS00320 at 72.355 kb on - strand, within HER17_RS00320 at 72.355 kb on - strand, within HER17_RS00320 at 72.355 kb on - strand, within HER17_RS00320 at 72.380 kb on + strand, within HER17_RS00320 at 72.381 kb on - strand, within HER17_RS00320 at 72.384 kb on + strand, within HER17_RS00320 at 72.384 kb on + strand, within HER17_RS00320 at 72.384 kb on + strand, within HER17_RS00320 at 72.384 kb on + strand, within HER17_RS00320 at 72.384 kb on + strand, within HER17_RS00320 at 72.384 kb on + strand, within HER17_RS00320 at 72.385 kb on - strand, within HER17_RS00320 at 72.385 kb on - strand, within HER17_RS00320 at 72.433 kb on + strand, within HER17_RS00320 at 72.468 kb on + strand at 72.468 kb on + strand at 72.468 kb on + strand at 72.482 kb on + strand at 72.482 kb on + strand at 72.539 kb on + strand at 72.539 kb on + strand at 72.540 kb on - strand at 72.577 kb on - strand at 72.583 kb on + strand at 72.583 kb on + strand at 72.583 kb on + strand at 72.583 kb on + strand at 72.584 kb on - strand at 72.584 kb on - strand at 72.584 kb on - strand at 72.584 kb on - strand at 72.637 kb on + strand at 72.637 kb on + strand at 72.652 kb on - strand at 72.660 kb on - strand at 72.660 kb on - strand at 72.679 kb on + strand at 72.680 kb on - strand at 72.690 kb on + strand at 72.690 kb on + strand at 72.691 kb on - strand at 72.710 kb on + strand at 72.710 kb on + strand at 72.710 kb on + strand at 72.711 kb on - strand at 72.721 kb on + strand at 72.721 kb on + strand at 72.721 kb on + strand at 72.784 kb on + strand at 72.842 kb on - strand, within HER17_RS00325 at 72.853 kb on + strand, within HER17_RS00325 at 72.905 kb on + strand, within HER17_RS00325 at 72.905 kb on + strand, within HER17_RS00325 at 72.905 kb on + strand, within HER17_RS00325 at 72.906 kb on - strand, within HER17_RS00325 at 72.906 kb on - strand, within HER17_RS00325 at 72.906 kb on - strand, within HER17_RS00325 at 72.906 kb on - strand, within HER17_RS00325 at 72.930 kb on + strand, within HER17_RS00325 at 72.931 kb on - strand, within HER17_RS00325 at 72.935 kb on + strand, within HER17_RS00325 at 72.935 kb on + strand, within HER17_RS00325 at 72.936 kb on - strand, within HER17_RS00325 at 72.936 kb on - strand, within HER17_RS00325 at 72.936 kb on - strand, within HER17_RS00325 at 73.015 kb on + strand, within HER17_RS00325 at 73.016 kb on - strand, within HER17_RS00325 at 73.019 kb on - strand, within HER17_RS00325 at 73.173 kb on - strand, within HER17_RS00325 at 73.235 kb on + strand, within HER17_RS00325 at 73.344 kb on - strand, within HER17_RS00325 at 73.344 kb on - strand, within HER17_RS00325 at 73.361 kb on + strand, within HER17_RS00325 at 73.361 kb on + strand, within HER17_RS00325 at 73.362 kb on - strand, within HER17_RS00325 at 73.362 kb on - strand, within HER17_RS00325 at 73.362 kb on - strand, within HER17_RS00325 at 73.366 kb on + strand, within HER17_RS00325 at 73.367 kb on - strand, within HER17_RS00325 at 73.393 kb on + strand, within HER17_RS00325 at 73.394 kb on - strand, within HER17_RS00325 at 73.394 kb on - strand, within HER17_RS00325 at 73.394 kb on - strand, within HER17_RS00325 at 73.394 kb on - strand, within HER17_RS00325 at 73.394 kb on - strand, within HER17_RS00325 at 73.404 kb on + strand, within HER17_RS00325 at 73.404 kb on + strand, within HER17_RS00325
Per-strain Table
Position Strand Gene LocusTag Fraction M9+glucose+arginine remove 70,478 + HER17_RS00315 0.60 -1.5 70,479 - HER17_RS00315 0.60 +0.1 70,483 - HER17_RS00315 0.60 -0.7 70,483 - HER17_RS00315 0.60 +0.9 70,566 + HER17_RS00315 0.67 +1.8 70,567 - HER17_RS00315 0.67 +0.8 70,567 - HER17_RS00315 0.67 -0.6 70,568 + HER17_RS00315 0.67 +0.0 70,568 + HER17_RS00315 0.67 +1.0 70,569 - HER17_RS00315 0.67 +0.3 70,569 - HER17_RS00315 0.67 +0.5 70,569 - HER17_RS00315 0.67 -0.6 70,628 + HER17_RS00315 0.72 +0.7 70,628 + HER17_RS00315 0.72 +1.9 70,628 + HER17_RS00315 0.72 +2.2 70,628 + HER17_RS00315 0.72 -2.1 70,628 + HER17_RS00315 0.72 +0.1 70,628 + HER17_RS00315 0.72 +1.2 70,629 - HER17_RS00315 0.72 +0.1 70,636 - HER17_RS00315 0.73 +0.8 70,636 - HER17_RS00315 0.73 -0.7 70,639 + HER17_RS00315 0.73 -1.4 70,639 + HER17_RS00315 0.73 -0.2 70,639 + HER17_RS00315 0.73 +0.7 70,640 - HER17_RS00315 0.73 +1.0 70,640 - HER17_RS00315 0.73 +0.1 70,680 + HER17_RS00315 0.76 -1.2 70,681 - HER17_RS00315 0.76 +0.3 70,714 - HER17_RS00315 0.79 -0.7 70,714 - HER17_RS00315 0.79 -0.0 70,747 - HER17_RS00315 0.82 -0.1 70,753 - HER17_RS00315 0.82 -1.9 70,753 - HER17_RS00315 0.82 -0.7 70,769 + HER17_RS00315 0.83 -0.7 70,770 - HER17_RS00315 0.83 +0.2 70,770 - HER17_RS00315 0.83 -1.4 70,832 + HER17_RS00315 0.88 +0.0 70,833 - HER17_RS00315 0.88 +1.7 70,833 - HER17_RS00315 0.88 -0.9 70,833 - HER17_RS00315 0.88 +1.2 70,894 - -0.3 70,894 - +0.2 70,921 + -0.3 70,977 + +0.2 70,977 + +0.0 70,982 + -0.5 70,982 + -2.0 70,982 + -1.0 70,983 - -2.5 71,020 - -0.9 71,035 - +1.1 71,101 + -1.4 71,102 - -2.0 71,118 + +0.3 71,119 - -2.5 71,286 + -0.9 71,388 - +0.6 71,396 + -0.2 71,396 + -0.3 71,567 + HER17_RS00320 0.16 -0.9 71,568 - HER17_RS00320 0.16 +0.3 71,644 + HER17_RS00320 0.23 -1.8 71,706 - HER17_RS00320 0.28 +0.4 71,820 + HER17_RS00320 0.37 +0.5 71,820 + HER17_RS00320 0.37 +0.0 71,820 + HER17_RS00320 0.37 -0.1 71,820 + HER17_RS00320 0.37 -1.3 71,820 + HER17_RS00320 0.37 -0.0 71,820 + HER17_RS00320 0.37 +0.5 71,821 - HER17_RS00320 0.37 -0.2 71,821 - HER17_RS00320 0.37 -2.8 71,821 - HER17_RS00320 0.37 -0.2 71,821 - HER17_RS00320 0.37 +1.4 71,821 - HER17_RS00320 0.37 +0.7 71,821 - HER17_RS00320 0.37 +1.5 71,970 + HER17_RS00320 0.50 -1.1 71,971 - HER17_RS00320 0.50 +0.5 72,027 + HER17_RS00320 0.54 +0.9 72,039 + HER17_RS00320 0.55 -0.2 72,048 - HER17_RS00320 0.56 +1.4 72,051 + HER17_RS00320 0.56 +0.3 72,051 + HER17_RS00320 0.56 +1.4 72,052 - HER17_RS00320 0.56 -1.6 72,129 - HER17_RS00320 0.63 +0.0 72,168 + HER17_RS00320 0.66 -0.9 72,169 - HER17_RS00320 0.66 -0.8 72,212 + HER17_RS00320 0.70 -0.8 72,237 - HER17_RS00320 0.72 +1.2 72,354 + HER17_RS00320 0.81 -0.9 72,354 + HER17_RS00320 0.81 -1.1 72,354 + HER17_RS00320 0.81 -1.7 72,355 - HER17_RS00320 0.81 +1.2 72,355 - HER17_RS00320 0.81 -0.6 72,355 - HER17_RS00320 0.81 -0.9 72,380 + HER17_RS00320 0.84 +0.0 72,381 - HER17_RS00320 0.84 +0.0 72,384 + HER17_RS00320 0.84 -0.6 72,384 + HER17_RS00320 0.84 +0.8 72,384 + HER17_RS00320 0.84 +0.3 72,384 + HER17_RS00320 0.84 +0.8 72,384 + HER17_RS00320 0.84 -1.2 72,384 + HER17_RS00320 0.84 +1.6 72,385 - HER17_RS00320 0.84 -0.7 72,385 - HER17_RS00320 0.84 -2.7 72,433 + HER17_RS00320 0.88 +0.3 72,468 + -0.3 72,468 + +0.4 72,468 + -0.2 72,482 + +1.3 72,482 + +0.8 72,539 + -0.0 72,539 + +0.9 72,540 - +0.2 72,577 - +0.1 72,583 + +0.8 72,583 + +0.2 72,583 + -1.6 72,583 + -1.4 72,584 - +1.6 72,584 - +0.0 72,584 - +1.2 72,584 - +1.3 72,637 + +1.4 72,637 + -0.4 72,652 - -1.1 72,660 - -1.0 72,660 - -0.1 72,679 + -1.1 72,680 - -0.6 72,690 + -1.1 72,690 + +1.2 72,691 - +0.5 72,710 + -0.7 72,710 + +0.4 72,710 + +0.9 72,711 - +1.4 72,721 + -0.4 72,721 + -2.0 72,721 + +0.6 72,784 + -0.3 72,842 - HER17_RS00325 0.11 +0.4 72,853 + HER17_RS00325 0.12 -0.4 72,905 + HER17_RS00325 0.18 +0.7 72,905 + HER17_RS00325 0.18 +0.3 72,905 + HER17_RS00325 0.18 +0.1 72,906 - HER17_RS00325 0.18 -1.4 72,906 - HER17_RS00325 0.18 +1.6 72,906 - HER17_RS00325 0.18 -0.2 72,906 - HER17_RS00325 0.18 +0.2 72,930 + HER17_RS00325 0.21 -0.6 72,931 - HER17_RS00325 0.21 -1.1 72,935 + HER17_RS00325 0.21 -0.8 72,935 + HER17_RS00325 0.21 -1.0 72,936 - HER17_RS00325 0.21 +1.1 72,936 - HER17_RS00325 0.21 +0.8 72,936 - HER17_RS00325 0.21 -0.1 73,015 + HER17_RS00325 0.30 -1.6 73,016 - HER17_RS00325 0.30 +1.5 73,019 - HER17_RS00325 0.30 -0.6 73,173 - HER17_RS00325 0.47 -0.7 73,235 + HER17_RS00325 0.54 +0.6 73,344 - HER17_RS00325 0.66 +1.6 73,344 - HER17_RS00325 0.66 +0.6 73,361 + HER17_RS00325 0.68 -0.8 73,361 + HER17_RS00325 0.68 -2.7 73,362 - HER17_RS00325 0.68 -1.3 73,362 - HER17_RS00325 0.68 -0.3 73,362 - HER17_RS00325 0.68 +0.2 73,366 + HER17_RS00325 0.69 -0.6 73,367 - HER17_RS00325 0.69 -0.3 73,393 + HER17_RS00325 0.71 -1.3 73,394 - HER17_RS00325 0.72 -3.5 73,394 - HER17_RS00325 0.72 +0.4 73,394 - HER17_RS00325 0.72 +0.6 73,394 - HER17_RS00325 0.72 +0.1 73,394 - HER17_RS00325 0.72 -0.4 73,404 + HER17_RS00325 0.73 +1.0 73,404 + HER17_RS00325 0.73 +1.3
Or see this region's nucleotide sequence