Experiment: M9+glucose+arginine
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HER17_RS03750 and HER17_RS03755 are separated by 2 nucleotides HER17_RS03755 and HER17_RS03760 are separated by 406 nucleotides HER17_RS03760 and HER17_RS03765 overlap by 4 nucleotides
HER17_RS03750: HER17_RS03750 - FCD domain-containing protein, at 849,893 to 850,660
_RS03750
HER17_RS03755: HER17_RS03755 - GNAT family N-acetyltransferase, at 850,663 to 851,136
_RS03755
HER17_RS03760: HER17_RS03760 - bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase, at 851,543 to 853,714
_RS03760
HER17_RS03765: HER17_RS03765 - lysophospholipid transporter LplT, at 853,711 to 854,940
_RS03765
Position (kb) 851
852
853
854 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 850.617 kb on - strand at 850.621 kb on - strand at 850.658 kb on + strand at 850.659 kb on - strand at 850.659 kb on - strand at 850.675 kb on - strand at 850.677 kb on + strand at 850.693 kb on + strand at 850.693 kb on + strand at 850.740 kb on - strand, within HER17_RS03755 at 850.797 kb on + strand, within HER17_RS03755 at 850.854 kb on - strand, within HER17_RS03755 at 850.886 kb on + strand, within HER17_RS03755 at 850.927 kb on + strand, within HER17_RS03755 at 850.927 kb on + strand, within HER17_RS03755 at 850.928 kb on - strand, within HER17_RS03755 at 850.928 kb on - strand, within HER17_RS03755 at 850.928 kb on - strand, within HER17_RS03755 at 850.951 kb on - strand, within HER17_RS03755 at 850.982 kb on + strand, within HER17_RS03755 at 850.982 kb on + strand, within HER17_RS03755 at 850.983 kb on - strand, within HER17_RS03755 at 851.020 kb on + strand, within HER17_RS03755 at 851.020 kb on + strand, within HER17_RS03755 at 851.044 kb on + strand, within HER17_RS03755 at 851.114 kb on - strand at 851.164 kb on - strand at 851.183 kb on + strand at 851.199 kb on + strand at 851.201 kb on + strand at 851.202 kb on - strand at 851.202 kb on - strand at 851.206 kb on + strand at 851.206 kb on + strand at 851.206 kb on + strand at 851.207 kb on - strand at 851.255 kb on + strand at 851.255 kb on + strand at 851.255 kb on + strand at 851.271 kb on - strand at 851.271 kb on - strand at 851.283 kb on + strand at 851.283 kb on + strand at 851.283 kb on + strand at 851.283 kb on + strand at 851.285 kb on + strand at 851.285 kb on + strand at 851.286 kb on - strand at 851.286 kb on - strand at 851.300 kb on + strand at 851.300 kb on + strand at 851.300 kb on + strand at 851.301 kb on - strand at 851.301 kb on - strand at 851.342 kb on - strand at 851.439 kb on + strand at 851.455 kb on + strand at 851.456 kb on - strand at 851.464 kb on + strand at 851.464 kb on + strand at 851.464 kb on + strand at 851.464 kb on + strand at 851.464 kb on + strand at 851.464 kb on + strand at 851.464 kb on + strand at 851.464 kb on + strand at 851.464 kb on + strand at 851.464 kb on + strand at 851.464 kb on + strand at 851.464 kb on + strand at 851.464 kb on + strand at 851.464 kb on + strand at 851.465 kb on - strand at 851.465 kb on - strand at 851.465 kb on - strand at 851.465 kb on - strand at 851.465 kb on - strand at 851.465 kb on - strand at 851.465 kb on - strand at 851.465 kb on - strand at 851.465 kb on - strand at 851.465 kb on - strand at 851.465 kb on - strand at 851.465 kb on - strand at 851.465 kb on - strand at 851.465 kb on - strand at 851.465 kb on - strand at 851.465 kb on - strand at 851.465 kb on - strand at 851.465 kb on - strand at 851.465 kb on - strand at 851.465 kb on - strand at 851.468 kb on + strand at 851.468 kb on + strand at 851.469 kb on - strand at 851.469 kb on - strand at 851.469 kb on - strand at 851.471 kb on + strand at 851.471 kb on + strand at 851.472 kb on - strand at 851.482 kb on - strand at 851.530 kb on - strand at 851.552 kb on - strand at 851.559 kb on + strand at 851.559 kb on + strand at 851.560 kb on - strand at 851.627 kb on - strand at 851.627 kb on - strand at 851.627 kb on - strand at 851.714 kb on + strand at 851.715 kb on - strand at 851.715 kb on - strand at 851.759 kb on + strand at 851.759 kb on + strand at 851.759 kb on + strand at 851.759 kb on + strand at 851.759 kb on + strand at 851.760 kb on - strand at 851.760 kb on - strand at 851.760 kb on - strand at 851.760 kb on - strand at 851.761 kb on + strand, within HER17_RS03760 at 851.762 kb on - strand, within HER17_RS03760 at 851.812 kb on + strand, within HER17_RS03760 at 851.812 kb on + strand, within HER17_RS03760 at 851.946 kb on + strand, within HER17_RS03760 at 851.947 kb on - strand, within HER17_RS03760 at 852.022 kb on + strand, within HER17_RS03760 at 852.023 kb on - strand, within HER17_RS03760 at 852.023 kb on - strand, within HER17_RS03760 at 852.032 kb on + strand, within HER17_RS03760 at 852.032 kb on + strand, within HER17_RS03760 at 852.032 kb on + strand, within HER17_RS03760 at 852.047 kb on - strand, within HER17_RS03760 at 852.118 kb on + strand, within HER17_RS03760 at 852.118 kb on + strand, within HER17_RS03760 at 852.139 kb on + strand, within HER17_RS03760 at 852.161 kb on + strand, within HER17_RS03760 at 852.161 kb on + strand, within HER17_RS03760 at 852.243 kb on - strand, within HER17_RS03760 at 852.401 kb on + strand, within HER17_RS03760 at 852.402 kb on - strand, within HER17_RS03760 at 852.402 kb on - strand, within HER17_RS03760 at 852.495 kb on + strand, within HER17_RS03760 at 852.496 kb on - strand, within HER17_RS03760 at 852.496 kb on - strand, within HER17_RS03760 at 852.504 kb on + strand, within HER17_RS03760 at 852.504 kb on + strand, within HER17_RS03760 at 852.505 kb on - strand, within HER17_RS03760 at 852.505 kb on - strand, within HER17_RS03760 at 852.505 kb on - strand, within HER17_RS03760 at 852.505 kb on - strand, within HER17_RS03760 at 852.505 kb on - strand, within HER17_RS03760 at 852.518 kb on - strand, within HER17_RS03760 at 852.536 kb on + strand, within HER17_RS03760 at 852.536 kb on + strand, within HER17_RS03760 at 852.536 kb on + strand, within HER17_RS03760 at 852.537 kb on - strand, within HER17_RS03760 at 852.658 kb on + strand, within HER17_RS03760 at 852.658 kb on + strand, within HER17_RS03760 at 852.736 kb on + strand, within HER17_RS03760 at 852.769 kb on + strand, within HER17_RS03760 at 852.769 kb on + strand, within HER17_RS03760 at 852.940 kb on - strand, within HER17_RS03760 at 852.947 kb on + strand, within HER17_RS03760 at 852.989 kb on + strand, within HER17_RS03760 at 853.242 kb on - strand, within HER17_RS03760 at 853.319 kb on + strand, within HER17_RS03760 at 853.519 kb on + strand at 853.610 kb on + strand at 853.755 kb on + strand at 853.894 kb on + strand, within HER17_RS03765 at 853.894 kb on + strand, within HER17_RS03765 at 853.968 kb on + strand, within HER17_RS03765 at 853.969 kb on - strand, within HER17_RS03765 at 854.056 kb on + strand, within HER17_RS03765 at 854.254 kb on - strand, within HER17_RS03765 at 854.254 kb on - strand, within HER17_RS03765 at 854.388 kb on + strand, within HER17_RS03765 at 854.388 kb on + strand, within HER17_RS03765 at 854.388 kb on + strand, within HER17_RS03765 at 854.388 kb on + strand, within HER17_RS03765 at 854.389 kb on - strand, within HER17_RS03765 at 854.555 kb on + strand, within HER17_RS03765 at 854.556 kb on - strand, within HER17_RS03765 at 854.556 kb on - strand, within HER17_RS03765 at 854.556 kb on - strand, within HER17_RS03765 at 854.595 kb on - strand, within HER17_RS03765 at 854.635 kb on + strand, within HER17_RS03765
Per-strain Table
Position Strand Gene LocusTag Fraction M9+glucose+arginine remove 850,617 - -0.7 850,621 - +1.9 850,658 + -0.1 850,659 - -0.5 850,659 - +0.5 850,675 - +0.6 850,677 + -0.5 850,693 + +2.1 850,693 + -0.2 850,740 - HER17_RS03755 0.16 -1.9 850,797 + HER17_RS03755 0.28 +1.1 850,854 - HER17_RS03755 0.40 -0.6 850,886 + HER17_RS03755 0.47 +1.0 850,927 + HER17_RS03755 0.56 +0.2 850,927 + HER17_RS03755 0.56 +0.6 850,928 - HER17_RS03755 0.56 +0.1 850,928 - HER17_RS03755 0.56 +0.7 850,928 - HER17_RS03755 0.56 +0.1 850,951 - HER17_RS03755 0.61 +0.5 850,982 + HER17_RS03755 0.67 +0.2 850,982 + HER17_RS03755 0.67 +0.4 850,983 - HER17_RS03755 0.68 +0.7 851,020 + HER17_RS03755 0.75 +0.4 851,020 + HER17_RS03755 0.75 +0.6 851,044 + HER17_RS03755 0.80 +1.6 851,114 - -0.1 851,164 - -1.9 851,183 + -0.3 851,199 + +1.0 851,201 + -0.4 851,202 - +1.1 851,202 - +1.4 851,206 + +0.6 851,206 + +2.1 851,206 + -0.9 851,207 - -2.3 851,255 + +1.9 851,255 + +0.8 851,255 + -0.4 851,271 - +0.2 851,271 - +1.5 851,283 + +0.4 851,283 + -0.9 851,283 + +0.0 851,283 + -0.2 851,285 + +0.2 851,285 + +0.3 851,286 - +0.5 851,286 - +1.1 851,300 + +0.4 851,300 + +0.2 851,300 + -0.0 851,301 - +0.3 851,301 - -0.1 851,342 - -0.2 851,439 + +1.4 851,455 + -1.4 851,456 - +1.4 851,464 + -0.9 851,464 + +0.3 851,464 + -2.4 851,464 + -0.5 851,464 + -0.5 851,464 + -2.5 851,464 + -0.3 851,464 + +1.1 851,464 + -0.2 851,464 + +0.4 851,464 + -0.4 851,464 + +0.2 851,464 + -0.6 851,464 + -0.2 851,465 - +0.4 851,465 - -1.0 851,465 - -0.2 851,465 - -0.2 851,465 - -1.1 851,465 - -0.4 851,465 - -0.5 851,465 - -0.3 851,465 - -0.7 851,465 - +0.8 851,465 - +0.6 851,465 - +1.1 851,465 - +2.5 851,465 - -1.0 851,465 - -0.4 851,465 - -1.4 851,465 - +0.9 851,465 - +0.6 851,465 - +0.5 851,465 - -2.2 851,468 + +0.8 851,468 + -0.1 851,469 - +0.7 851,469 - -0.4 851,469 - +0.5 851,471 + +0.9 851,471 + +1.1 851,472 - -0.6 851,482 - -1.9 851,530 - -0.6 851,552 - +0.1 851,559 + +0.5 851,559 + +0.3 851,560 - +0.5 851,627 - -0.1 851,627 - -0.4 851,627 - +1.0 851,714 + -2.9 851,715 - -0.5 851,715 - +0.1 851,759 + -0.6 851,759 + +0.5 851,759 + -1.6 851,759 + +0.4 851,759 + +1.2 851,760 - +0.3 851,760 - +0.7 851,760 - +0.2 851,760 - -0.3 851,761 + HER17_RS03760 0.10 +1.1 851,762 - HER17_RS03760 0.10 -0.4 851,812 + HER17_RS03760 0.12 -0.4 851,812 + HER17_RS03760 0.12 +0.4 851,946 + HER17_RS03760 0.19 -0.3 851,947 - HER17_RS03760 0.19 +0.9 852,022 + HER17_RS03760 0.22 -0.1 852,023 - HER17_RS03760 0.22 +0.6 852,023 - HER17_RS03760 0.22 +1.2 852,032 + HER17_RS03760 0.23 +1.8 852,032 + HER17_RS03760 0.23 +1.0 852,032 + HER17_RS03760 0.23 +0.3 852,047 - HER17_RS03760 0.23 +1.1 852,118 + HER17_RS03760 0.26 -0.1 852,118 + HER17_RS03760 0.26 +0.5 852,139 + HER17_RS03760 0.27 -0.0 852,161 + HER17_RS03760 0.28 +0.6 852,161 + HER17_RS03760 0.28 -0.3 852,243 - HER17_RS03760 0.32 +1.0 852,401 + HER17_RS03760 0.40 +2.1 852,402 - HER17_RS03760 0.40 +0.5 852,402 - HER17_RS03760 0.40 -0.9 852,495 + HER17_RS03760 0.44 +0.8 852,496 - HER17_RS03760 0.44 +1.4 852,496 - HER17_RS03760 0.44 +0.7 852,504 + HER17_RS03760 0.44 +0.9 852,504 + HER17_RS03760 0.44 -1.4 852,505 - HER17_RS03760 0.44 -1.7 852,505 - HER17_RS03760 0.44 -0.1 852,505 - HER17_RS03760 0.44 +0.9 852,505 - HER17_RS03760 0.44 -1.6 852,505 - HER17_RS03760 0.44 -0.1 852,518 - HER17_RS03760 0.45 -2.3 852,536 + HER17_RS03760 0.46 +0.2 852,536 + HER17_RS03760 0.46 -1.4 852,536 + HER17_RS03760 0.46 -0.2 852,537 - HER17_RS03760 0.46 +0.3 852,658 + HER17_RS03760 0.51 +0.8 852,658 + HER17_RS03760 0.51 +1.3 852,736 + HER17_RS03760 0.55 +0.9 852,769 + HER17_RS03760 0.56 +0.1 852,769 + HER17_RS03760 0.56 +1.4 852,940 - HER17_RS03760 0.64 +0.8 852,947 + HER17_RS03760 0.65 +0.9 852,989 + HER17_RS03760 0.67 -0.1 853,242 - HER17_RS03760 0.78 +0.9 853,319 + HER17_RS03760 0.82 +0.5 853,519 + -1.8 853,610 + +0.8 853,755 + +0.6 853,894 + HER17_RS03765 0.15 +0.5 853,894 + HER17_RS03765 0.15 +0.1 853,968 + HER17_RS03765 0.21 -0.2 853,969 - HER17_RS03765 0.21 -1.0 854,056 + HER17_RS03765 0.28 -0.1 854,254 - HER17_RS03765 0.44 +0.5 854,254 - HER17_RS03765 0.44 +0.8 854,388 + HER17_RS03765 0.55 +0.1 854,388 + HER17_RS03765 0.55 +0.3 854,388 + HER17_RS03765 0.55 +1.4 854,388 + HER17_RS03765 0.55 +0.3 854,389 - HER17_RS03765 0.55 -3.2 854,555 + HER17_RS03765 0.69 -0.9 854,556 - HER17_RS03765 0.69 -1.0 854,556 - HER17_RS03765 0.69 -0.0 854,556 - HER17_RS03765 0.69 -0.5 854,595 - HER17_RS03765 0.72 +0.9 854,635 + HER17_RS03765 0.75 +0.1
Or see this region's nucleotide sequence