Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS19525

Experiment: M9+glucose+arginine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glucose+arginine
4,385,845	+		HER17_RS19515	0.89	-0.8
4,385,845	+		HER17_RS19515	0.89	-2.4
4,385,846	-		HER17_RS19515	0.89	+0.1
4,385,846	-		HER17_RS19515	0.89	-1.9
4,385,846	-		HER17_RS19515	0.89	-2.0
4,385,846	-		HER17_RS19515	0.89	-0.1
4,385,846	-		HER17_RS19515	0.89	-1.2
4,385,846	-		HER17_RS19515	0.89	-1.8
4,385,850	-				-0.4
4,385,949	-				-1.1
4,385,991	+				-0.7
4,385,991	+				-0.2
4,385,992	-				-1.7
4,385,992	-				-0.9
4,385,992	-				+0.2
4,385,992	-				+1.3
4,386,044	-		HER17_RS19520	0.13	+2.1
4,386,126	+		HER17_RS19520	0.34	+1.0
4,386,126	+		HER17_RS19520	0.34	-1.1
4,386,254	+		HER17_RS19520	0.67	-0.6
4,386,266	-		HER17_RS19520	0.70	-0.2
4,386,384	-				+0.3
4,386,452	-				-1.2
4,386,460	+				+1.7
4,386,461	-				-0.0
4,386,461	-				+0.2
4,386,461	-				+1.2
4,386,461	-				-1.4
4,386,461	-				-0.2
4,386,521	+				+0.5
4,386,607	-				+0.4
4,386,626	-				-1.1
4,386,658	+				-2.2
4,386,659	-				-0.4
4,386,660	+				-0.2
4,386,660	+				-1.3
4,386,661	-				-0.2
4,386,685	+				+0.1
4,386,692	-				-0.1
4,386,893	+				+1.5
4,386,893	+				-0.3
4,386,894	-				+1.7
4,386,894	-				-0.5
4,386,894	-				+0.6
4,386,948	+				-0.6
4,386,948	+				-1.3
4,386,948	+				-0.2
4,386,948	+				+1.9
4,386,948	+				-0.5
4,386,949	-				+0.8
4,386,949	-				+0.7
4,387,002	-		HER17_RS19525	0.10	+1.2
4,387,018	+		HER17_RS19525	0.11	+0.2
4,387,018	+		HER17_RS19525	0.11	-2.8
4,387,019	-		HER17_RS19525	0.11	-0.2
4,387,019	-		HER17_RS19525	0.11	+0.2
4,387,019	-		HER17_RS19525	0.11	+0.2
4,387,019	-		HER17_RS19525	0.11	+2.0
4,387,019	-		HER17_RS19525	0.11	-2.3
4,387,022	+		HER17_RS19525	0.11	+0.3
4,387,023	-		HER17_RS19525	0.11	+0.2
4,387,023	-		HER17_RS19525	0.11	-1.7
4,387,032	-		HER17_RS19525	0.12	-1.7
4,387,147	+		HER17_RS19525	0.17	+0.2
4,387,148	-		HER17_RS19525	0.17	-0.4
4,387,148	-		HER17_RS19525	0.17	-0.2
4,387,211	+		HER17_RS19525	0.20	-1.3
4,387,211	+		HER17_RS19525	0.20	-0.2
4,387,211	+		HER17_RS19525	0.20	-0.3
4,387,212	-		HER17_RS19525	0.20	+0.8
4,387,212	-		HER17_RS19525	0.20	+0.6
4,387,212	-		HER17_RS19525	0.20	-0.0
4,387,212	-		HER17_RS19525	0.20	+1.3
4,387,212	-		HER17_RS19525	0.20	+0.0
4,387,212	-		HER17_RS19525	0.20	-0.8
4,387,263	-		HER17_RS19525	0.22	+0.1
4,387,278	-		HER17_RS19525	0.23	+1.0
4,387,300	+		HER17_RS19525	0.24	+1.0
4,387,439	+		HER17_RS19525	0.31	-1.0
4,387,440	-		HER17_RS19525	0.31	-0.2
4,387,440	-		HER17_RS19525	0.31	-0.7
4,387,440	-		HER17_RS19525	0.31	-0.2
4,387,463	-		HER17_RS19525	0.32	-0.1
4,387,553	+		HER17_RS19525	0.36	-0.5
4,387,554	-		HER17_RS19525	0.36	+2.3
4,387,561	-		HER17_RS19525	0.36	+0.1
4,387,583	+		HER17_RS19525	0.37	-0.5
4,387,584	-		HER17_RS19525	0.37	-2.3
4,387,616	-		HER17_RS19525	0.39	+0.2
4,387,820	+		HER17_RS19525	0.49	+0.2
4,387,821	-		HER17_RS19525	0.49	+0.7
4,387,821	-		HER17_RS19525	0.49	+0.5
4,387,883	+		HER17_RS19525	0.51	+1.1
4,387,883	+		HER17_RS19525	0.51	+0.1
4,387,883	+		HER17_RS19525	0.51	-0.7
4,387,883	+		HER17_RS19525	0.51	-1.1
4,387,884	-		HER17_RS19525	0.52	+1.2
4,387,884	-		HER17_RS19525	0.52	+0.1
4,387,990	+		HER17_RS19525	0.56	-1.3
4,387,990	+		HER17_RS19525	0.56	+0.5
4,387,991	-		HER17_RS19525	0.57	+1.0
4,387,995	+		HER17_RS19525	0.57	+2.4
4,387,995	+		HER17_RS19525	0.57	+0.5
4,387,995	+		HER17_RS19525	0.57	-1.3
4,388,159	+		HER17_RS19525	0.64	+1.2
4,388,159	+		HER17_RS19525	0.64	-1.1
4,388,159	+		HER17_RS19525	0.64	+0.9
4,388,159	+		HER17_RS19525	0.64	-0.6
4,388,159	+		HER17_RS19525	0.64	-0.6
4,388,159	+		HER17_RS19525	0.64	-0.2
4,388,160	-		HER17_RS19525	0.64	+0.3
4,388,160	-		HER17_RS19525	0.64	-0.3
4,388,161	+		HER17_RS19525	0.64	+1.1
4,388,249	+		HER17_RS19525	0.69	+0.7
4,388,250	-		HER17_RS19525	0.69	+0.4
4,388,405	+		HER17_RS19525	0.76	+0.9
4,388,406	-		HER17_RS19525	0.76	-0.7
4,388,496	-		HER17_RS19525	0.80	+0.3
4,388,496	-		HER17_RS19525	0.80	+1.7
4,388,496	-		HER17_RS19525	0.80	+0.1
4,388,498	+		HER17_RS19525	0.80	-0.6
4,388,499	-		HER17_RS19525	0.80	+0.1
4,388,660	+		HER17_RS19525	0.88	+0.5
4,388,660	+		HER17_RS19525	0.88	+0.6
4,388,666	+		HER17_RS19525	0.88	+0.9
4,388,667	-		HER17_RS19525	0.88	+1.3
4,388,667	-		HER17_RS19525	0.88	-1.8
4,388,681	+		HER17_RS19525	0.89	-0.1
4,388,681	+		HER17_RS19525	0.89	-0.1
4,388,682	-		HER17_RS19525	0.89	+0.6
4,388,715	-				-0.9
4,388,715	-				+0.5
4,388,898	+				-1.0
4,388,899	-				+0.1
4,388,899	-				+0.5
4,388,983	+				+1.3
4,388,983	+				+0.4
4,389,000	+				+1.3
4,389,000	+				-0.8
4,389,001	-				-1.2
4,389,007	+				+2.1
4,389,007	+				+0.7
4,389,008	-				+0.2
4,389,017	-				+0.6
4,389,017	-				+0.1
4,389,017	-				+0.1
4,389,100	+		HER17_RS19530	0.21	-1.1
4,389,100	+		HER17_RS19530	0.21	-1.1
4,389,101	-		HER17_RS19530	0.22	+1.0
4,389,101	-		HER17_RS19530	0.22	-0.1
4,389,141	+		HER17_RS19530	0.30	+0.1
4,389,141	+		HER17_RS19530	0.30	+0.7
4,389,301	-		HER17_RS19530	0.65	-0.0
4,389,301	-		HER17_RS19530	0.65	-1.6
4,389,301	-		HER17_RS19530	0.65	+0.2
4,389,319	+		HER17_RS19530	0.68	-1.3
4,389,319	+		HER17_RS19530	0.68	+0.1
4,389,377	+		HER17_RS19530	0.81	+1.0
4,389,510	+				-0.4
4,389,511	-				-1.2
4,389,511	-				+0.8
4,389,511	-				+0.8
4,389,511	-				+0.3
4,389,766	+		HER17_RS19535	0.44	+0.2
4,389,869	-		HER17_RS19535	0.60	+0.3
4,389,869	-		HER17_RS19535	0.60	-0.5
4,389,893	+		HER17_RS19535	0.64	+0.8
4,389,894	-		HER17_RS19535	0.64	-0.3