Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS17190

Experiment: M9+glucose+arginine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glucose+arginine
3,869,197	+		HER17_RS17180	0.89	-1.7
3,869,197	+		HER17_RS17180	0.89	-0.9
3,869,198	-		HER17_RS17180	0.89	-1.3
3,869,198	-		HER17_RS17180	0.89	-0.7
3,869,202	+		HER17_RS17180	0.89	-2.3
3,869,202	+		HER17_RS17180	0.89	-2.6
3,869,202	+		HER17_RS17180	0.89	-1.3
3,869,288	+				-0.3
3,869,289	-				-2.3
3,869,346	+				-0.6
3,869,369	-				+0.5
3,869,401	+				+0.6
3,869,405	+				-0.5
3,869,406	-				+0.8
3,869,406	-				-1.3
3,869,499	+				-1.1
3,869,499	+				+1.0
3,869,504	+				-0.3
3,869,504	+				+0.1
3,869,507	-				-0.0
3,869,507	-				-1.7
3,869,507	-				+2.7
3,869,520	-				-2.7
3,869,520	-				-0.6
3,869,522	+				-0.7
3,869,529	+				-0.9
3,869,529	+				-2.8
3,869,530	-				+0.8
3,870,006	-				+0.3
3,870,060	+				-1.6
3,870,061	-				+1.0
3,870,061	-				+0.9
3,870,072	-				+0.8
3,870,072	-				-1.8
3,870,074	+				+0.4
3,870,075	-				+1.0
3,870,075	-				+0.5
3,870,154	-				+0.3
3,870,186	-				-0.9
3,870,186	-				-0.2
3,870,238	+				-1.2
3,870,288	-		HER17_RS17190	0.12	+0.1
3,870,299	+		HER17_RS17190	0.13	-3.0
3,870,299	+		HER17_RS17190	0.13	+0.2
3,870,403	-		HER17_RS17190	0.21	+0.3
3,870,403	-		HER17_RS17190	0.21	+0.2
3,870,524	-		HER17_RS17190	0.30	+0.2
3,870,572	-		HER17_RS17190	0.33	-2.2
3,870,585	-		HER17_RS17190	0.34	+0.1
3,870,632	+		HER17_RS17190	0.38	+0.8
3,870,632	+		HER17_RS17190	0.38	+0.5
3,870,632	+		HER17_RS17190	0.38	+0.5
3,870,633	-		HER17_RS17190	0.38	+1.5
3,870,678	+		HER17_RS17190	0.41	-1.3
3,870,678	+		HER17_RS17190	0.41	+0.7
3,870,678	+		HER17_RS17190	0.41	-0.2
3,870,678	+		HER17_RS17190	0.41	+1.7
3,870,678	+		HER17_RS17190	0.41	-2.0
3,870,678	+		HER17_RS17190	0.41	-1.6
3,870,679	-		HER17_RS17190	0.41	-1.4
3,870,679	-		HER17_RS17190	0.41	+0.6
3,870,679	-		HER17_RS17190	0.41	-0.5
3,870,680	+		HER17_RS17190	0.41	-1.5
3,870,680	+		HER17_RS17190	0.41	-0.1
3,870,680	+		HER17_RS17190	0.41	-0.0
3,870,680	+		HER17_RS17190	0.41	+0.6
3,870,681	-		HER17_RS17190	0.41	-1.8
3,870,681	-		HER17_RS17190	0.41	-0.5
3,870,681	-		HER17_RS17190	0.41	+1.5
3,870,681	-		HER17_RS17190	0.41	-0.5
3,870,854	+		HER17_RS17190	0.54	-0.8
3,870,854	+		HER17_RS17190	0.54	-2.7
3,871,074	+		HER17_RS17190	0.70	-0.7
3,871,075	-		HER17_RS17190	0.70	+0.8
3,871,075	-		HER17_RS17190	0.70	+1.3
3,871,075	-		HER17_RS17190	0.70	+0.8
3,871,075	-		HER17_RS17190	0.70	-0.9
3,871,075	-		HER17_RS17190	0.70	+0.4
3,871,116	+		HER17_RS17190	0.73	-0.3
3,871,119	-		HER17_RS17190	0.73	+0.8
3,871,119	-		HER17_RS17190	0.73	-0.3
3,871,119	-		HER17_RS17190	0.73	+0.2
3,871,119	-		HER17_RS17190	0.73	+0.1
3,871,240	+		HER17_RS17190	0.82	+0.9
3,871,240	+		HER17_RS17190	0.82	-0.6
3,871,240	+		HER17_RS17190	0.82	-0.3
3,871,241	-		HER17_RS17190	0.82	+0.4
3,871,241	-		HER17_RS17190	0.82	-0.5
3,871,565	-		HER17_RS17195	0.12	+0.9
3,871,565	-		HER17_RS17195	0.12	+1.3
3,871,596	+		HER17_RS17195	0.16	-2.8
3,871,796	-		HER17_RS17195	0.46	+0.5
3,871,796	-		HER17_RS17195	0.46	+0.1
3,871,821	-		HER17_RS17195	0.49	+1.0
3,871,821	-		HER17_RS17195	0.49	-0.1
3,871,867	+		HER17_RS17195	0.56	-1.9
3,871,873	+		HER17_RS17195	0.57	+0.2
3,871,873	+		HER17_RS17195	0.57	+1.7
3,871,873	+		HER17_RS17195	0.57	+0.2
3,871,873	+		HER17_RS17195	0.57	+0.9
3,871,873	+		HER17_RS17195	0.57	-0.6
3,871,874	-		HER17_RS17195	0.57	+0.1
3,871,874	-		HER17_RS17195	0.57	-0.2
3,871,874	-		HER17_RS17195	0.57	-0.0
3,871,874	-		HER17_RS17195	0.57	-1.6
3,871,874	-		HER17_RS17195	0.57	+1.0
3,871,874	-		HER17_RS17195	0.57	+1.2
3,871,875	+		HER17_RS17195	0.57	+0.4
3,871,875	+		HER17_RS17195	0.57	-0.8
3,871,875	+		HER17_RS17195	0.57	-1.5
3,871,875	+		HER17_RS17195	0.57	-0.0
3,871,875	+		HER17_RS17195	0.57	-1.7
3,871,875	+		HER17_RS17195	0.57	-2.3
3,871,876	-		HER17_RS17195	0.58	-1.7
3,871,876	-		HER17_RS17195	0.58	+0.5
3,871,876	-		HER17_RS17195	0.58	-0.4
3,871,876	-		HER17_RS17195	0.58	+0.0
3,871,876	-		HER17_RS17195	0.58	-0.8
3,871,876	-		HER17_RS17195	0.58	+0.4
3,871,876	-		HER17_RS17195	0.58	+0.8
3,871,939	+		HER17_RS17195	0.67	-0.7
3,871,939	+		HER17_RS17195	0.67	+0.7
3,871,939	+		HER17_RS17195	0.67	-1.5
3,871,939	+		HER17_RS17195	0.67	+0.6
3,871,939	+		HER17_RS17195	0.67	+0.1
3,871,939	+		HER17_RS17195	0.67	+0.6
3,871,940	-		HER17_RS17195	0.67	-0.6
3,871,940	-		HER17_RS17195	0.67	+0.8
3,871,940	-		HER17_RS17195	0.67	-1.8
3,871,940	-		HER17_RS17195	0.67	+1.0
3,872,031	+		HER17_RS17195	0.80	+0.8
3,872,031	+		HER17_RS17195	0.80	-1.8
3,872,032	-		HER17_RS17195	0.80	-1.0
3,872,032	-		HER17_RS17195	0.80	-1.4
3,872,109	+				-1.0
3,872,109	+				+0.2
3,872,135	+				-2.1
3,872,135	+				-0.9
3,872,135	+				+0.2
3,872,136	-				+0.5
3,872,136	-				-0.1
3,872,136	-				-1.0
3,872,153	+				-1.8
3,872,159	-				+0.2
3,872,165	-				+0.1
3,872,188	+				-1.4
3,872,188	+				-3.6
3,872,188	+				-0.0
3,872,189	-				+0.6
3,872,193	+				+0.8
3,872,193	+				-0.3
3,872,193	+				-1.8
3,872,193	+				+0.4
3,872,194	-				-0.5
3,872,194	-				+0.5
3,872,194	-				+0.6
3,872,197	+				+1.4
3,872,198	-				+0.2
3,872,237	+				-0.4
3,872,237	+				-0.9
3,872,237	+				-1.5
3,872,237	+				+0.9
3,872,237	+				-0.5
3,872,237	+				+0.4
3,872,238	-				+0.7
3,872,238	-				+1.3
3,872,238	-				-0.5
3,872,242	+				+0.7
3,872,242	+				+0.1
3,872,243	-				+0.3
3,872,243	-				+0.9
3,872,243	-				+1.6
3,872,243	-				-1.8
3,872,243	-				-0.2
3,872,246	+				+2.8
3,872,246	+				+0.7
3,872,247	-				-0.2
3,872,247	-				-2.6
3,872,247	-				+0.6
3,872,247	-				+0.4
3,872,247	-				+0.1
3,872,248	+				+0.3
3,872,248	+				-1.7
3,872,248	+				-1.0
3,872,248	+				-1.4
3,872,248	+				-0.8
3,872,248	+				-1.0
3,872,248	+				+0.3
3,872,248	+				+1.0
3,872,248	+				+1.5
3,872,248	+				+0.7
3,872,248	+				-0.6
3,872,248	+				+0.4
3,872,248	+				+0.4
3,872,248	+				-1.2
3,872,248	+				+1.0
3,872,248	+				+1.1
3,872,248	+				-0.5
3,872,249	-				-1.1
3,872,249	-				+0.3
3,872,249	-				+0.3
3,872,249	-				+0.8
3,872,249	-				-0.8
3,872,249	-				-0.2
3,872,249	-				-1.7
3,872,249	-				+0.4
3,872,249	-				+0.3
3,872,249	-				-1.1
3,872,249	-				-1.4
3,872,249	-				+0.7
3,872,249	-				+0.5
3,872,249	-				+0.3
3,872,249	-				+0.5
3,872,249	-				-1.0
3,872,249	-				-0.1
3,872,249	-				+0.6
3,872,257	+				+0.4
3,872,258	-				-0.7
3,872,258	-				-1.1
3,872,258	-				+0.5
3,872,278	+				-1.1
3,872,278	+				-0.1
3,872,294	+				+0.1
3,872,299	-				+0.5
3,872,299	-				+0.9
3,872,299	-				-1.5
3,872,357	+				-0.7
3,872,357	+				-3.1
3,872,370	+				-0.1
3,872,374	+				-1.3
3,872,375	-				-3.0
3,872,375	-				-2.5
3,872,397	+				+0.5
3,872,397	+				+0.5