Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS17610

Experiment: M9+polygalacturonate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+polygalacturonate
3,960,644	+		HER17_RS17605	0.19	+0.4
3,960,644	+		HER17_RS17605	0.19	-0.0
3,960,644	+		HER17_RS17605	0.19	+0.2
3,960,645	-		HER17_RS17605	0.19	-0.6
3,960,645	-		HER17_RS17605	0.19	-0.0
3,960,645	-		HER17_RS17605	0.19	+0.7
3,960,645	-		HER17_RS17605	0.19	+0.3
3,960,645	-		HER17_RS17605	0.19	+0.6
3,960,721	-		HER17_RS17605	0.27	-0.4
3,960,721	-		HER17_RS17605	0.27	+0.2
3,960,753	+		HER17_RS17605	0.30	+0.3
3,960,753	+		HER17_RS17605	0.30	+0.6
3,960,753	+		HER17_RS17605	0.30	-0.5
3,960,754	-		HER17_RS17605	0.30	+1.2
3,960,754	-		HER17_RS17605	0.30	-0.1
3,960,754	-		HER17_RS17605	0.30	+0.7
3,960,754	-		HER17_RS17605	0.30	+0.0
3,960,754	-		HER17_RS17605	0.30	-1.8
3,960,957	+		HER17_RS17605	0.50	+0.8
3,960,957	+		HER17_RS17605	0.50	-0.1
3,960,957	+		HER17_RS17605	0.50	+0.0
3,960,958	-		HER17_RS17605	0.50	+0.7
3,960,958	-		HER17_RS17605	0.50	+0.8
3,960,959	+		HER17_RS17605	0.50	-0.1
3,960,959	+		HER17_RS17605	0.50	+1.0
3,960,960	-		HER17_RS17605	0.50	+0.3
3,960,960	-		HER17_RS17605	0.50	+1.4
3,960,960	-		HER17_RS17605	0.50	+0.2
3,960,960	-		HER17_RS17605	0.50	+1.5
3,960,960	-		HER17_RS17605	0.50	-0.5
3,960,960	-		HER17_RS17605	0.50	+0.4
3,960,983	-		HER17_RS17605	0.53	+1.3
3,961,050	+		HER17_RS17605	0.59	+0.3
3,961,050	+		HER17_RS17605	0.59	+0.1
3,961,095	+		HER17_RS17605	0.64	+0.7
3,961,096	-		HER17_RS17605	0.64	+1.5
3,961,121	+		HER17_RS17605	0.66	+0.7
3,961,122	-		HER17_RS17605	0.66	-0.3
3,961,149	+		HER17_RS17605	0.69	+0.0
3,961,232	-		HER17_RS17605	0.77	-1.5
3,961,344	-		HER17_RS17605	0.88	-0.4
3,961,344	-		HER17_RS17605	0.88	+0.5
3,961,344	-		HER17_RS17605	0.88	+0.2
3,961,373	-				-0.9
3,961,382	-				+0.5
3,961,393	+				-0.2
3,961,393	+				+0.5
3,961,394	-				+0.2
3,961,394	-				+0.2
3,961,395	+				+1.2
3,961,395	+				+0.5
3,961,395	+				-1.8
3,961,396	-				-0.8
3,961,410	+				+0.1
3,961,410	+				-0.3
3,961,450	+				+0.6
3,961,451	-				-0.7
3,961,451	-				+0.0
3,961,510	+				+0.7
3,961,511	-				-1.8
3,961,511	-				+0.1
3,961,511	-				+0.6
3,961,515	+				+0.4
3,961,543	+				-0.6
3,961,543	+				-0.0
3,961,543	+				-0.5
3,961,543	+				+0.0
3,961,543	+				+0.4
3,961,543	+				-0.6
3,961,543	+				-1.6
3,961,544	-				+0.4
3,961,544	-				+0.2
3,961,544	-				+1.4
3,961,544	-				+0.2
3,961,544	-				-0.5
3,961,544	-				+0.8
3,961,545	+				+0.0
3,961,545	+				+0.3
3,961,545	+				+0.1
3,961,545	+				-0.5
3,961,545	+				-0.9
3,961,545	+				-0.5
3,961,545	+				+0.1
3,961,545	+				+0.4
3,961,545	+				+0.1
3,961,546	-				+0.2
3,961,546	-				-0.3
3,961,546	-				-0.3
3,961,546	-				-0.1
3,961,546	-				+2.2
3,961,546	-				+0.5
3,961,546	-				+1.2
3,961,547	+				+0.9
3,961,547	+				+1.3
3,961,547	+				+0.3
3,961,547	+				+0.0
3,961,547	+				+0.1
3,961,547	+				+0.5
3,961,547	+				+0.2
3,961,548	-				+0.2
3,961,548	-				+0.2
3,961,548	-				+0.2
3,961,548	-				-2.8
3,961,548	-				+0.1
3,961,548	-				-0.3
3,961,548	-				+0.8
3,961,548	-				-0.1
3,961,548	-				-0.3
3,961,548	-				+1.1
3,961,548	-				-0.2
3,961,549	+				+0.7
3,961,549	+				+1.0
3,961,549	+				-0.1
3,961,550	-				+0.7
3,961,550	-				-1.4
3,961,550	-				+0.7
3,961,550	-				-0.2
3,961,561	-				+0.2
3,961,561	-				+0.2
3,961,561	-				-0.1
3,961,618	+				-0.2
3,961,728	-		HER17_RS17610	0.10	-2.0
3,961,728	-		HER17_RS17610	0.10	+0.9
3,961,783	-		HER17_RS17610	0.16	+0.4
3,961,811	-		HER17_RS17610	0.19	+0.6
3,961,913	-		HER17_RS17610	0.30	-0.3
3,961,967	+		HER17_RS17610	0.35	+0.7
3,961,967	+		HER17_RS17610	0.35	+0.1
3,961,967	+		HER17_RS17610	0.35	+0.2
3,961,968	-		HER17_RS17610	0.36	+0.2
3,962,014	+		HER17_RS17610	0.40	+0.5
3,962,014	+		HER17_RS17610	0.40	-0.1
3,962,014	+		HER17_RS17610	0.40	+0.5
3,962,014	+		HER17_RS17610	0.40	+0.4
3,962,014	+		HER17_RS17610	0.40	+0.4
3,962,014	+		HER17_RS17610	0.40	-0.6
3,962,014	+		HER17_RS17610	0.40	+0.2
3,962,015	-		HER17_RS17610	0.41	-0.0
3,962,015	-		HER17_RS17610	0.41	+0.0
3,962,015	-		HER17_RS17610	0.41	+0.6
3,962,265	+		HER17_RS17610	0.67	+0.2
3,962,266	-		HER17_RS17610	0.67	+0.1
3,962,266	-		HER17_RS17610	0.67	-0.1
3,962,266	-		HER17_RS17610	0.67	+0.7
3,962,284	+		HER17_RS17610	0.69	+0.2
3,962,375	+		HER17_RS17610	0.78	+0.7
3,962,376	-		HER17_RS17610	0.79	-0.2
3,962,376	-		HER17_RS17610	0.79	+0.7
3,962,387	+		HER17_RS17610	0.80	-0.5
3,962,388	-		HER17_RS17610	0.80	-0.3
3,962,456	+		HER17_RS17610	0.87	+0.1
3,962,457	-		HER17_RS17610	0.87	-0.0
3,962,505	+				+1.1
3,962,505	+				+0.5
3,962,506	-				-0.2
3,962,506	-				+0.0
3,962,506	-				+0.5
3,962,506	-				-0.1
3,962,506	-				-0.1
3,962,506	-				+0.9
3,962,518	-				+0.7
3,962,535	+				+0.2
3,962,536	-				+0.4
3,962,536	-				+0.3
3,962,563	+				+0.6
3,962,564	-				+0.2
3,962,567	-				-0.2
3,962,567	-				+0.7
3,962,578	+				-0.3
3,962,578	+				-0.0
3,962,578	+				+0.1
3,962,593	+				+0.6
3,962,593	+				-0.0
3,962,621	+				+0.2
3,962,673	-		HER17_RS17615	0.19	-0.6
3,962,773	-		HER17_RS17615	0.38	-1.7
3,962,822	-		HER17_RS17615	0.47	+1.0
3,962,831	+		HER17_RS17615	0.49	-0.9
3,962,850	+		HER17_RS17615	0.52	+0.5
3,962,850	+		HER17_RS17615	0.52	+0.4
3,962,850	+		HER17_RS17615	0.52	-0.3
3,962,850	+		HER17_RS17615	0.52	+0.3
3,962,947	+		HER17_RS17615	0.71	+0.1
3,962,947	+		HER17_RS17615	0.71	-0.7
3,962,948	-		HER17_RS17615	0.71	+1.4
3,962,955	+		HER17_RS17615	0.72	+0.2
3,963,038	+		HER17_RS17615	0.88	+0.7
3,963,039	-		HER17_RS17615	0.88	-0.8
3,963,039	-		HER17_RS17615	0.88	+0.8
3,963,039	-		HER17_RS17615	0.88	+1.4
3,963,039	-		HER17_RS17615	0.88	-0.2
3,963,164	+				+1.8
3,963,174	+				+0.1
3,963,174	+				+0.2
3,963,214	+				+0.0
3,963,215	-				+0.5
3,963,215	-				+0.2
3,963,215	-				-0.3
3,963,215	-				+0.9
3,963,215	-				-0.5
3,963,215	-				+0.1
3,963,215	-				+0.2
3,963,215	-				-0.8
3,963,272	+				+0.7
3,963,273	-				-0.0
3,963,317	+				-0.3
3,963,320	+				+0.9
3,963,329	+				+0.1
3,963,329	+				-0.1
3,963,329	+				+0.3
3,963,329	+				-0.0
3,963,329	+				+0.5
3,963,330	-				+1.2
3,963,330	-				+0.9
3,963,330	-				-0.4
3,963,330	-				+0.5
3,963,333	+				+0.1
3,963,334	-				-0.6
3,963,347	+				+0.3
3,963,348	-				+0.3
3,963,432	+				-0.1
3,963,432	+				+0.7
3,963,433	-				+0.3
3,963,433	-				+0.4
3,963,433	-				+0.5
3,963,433	-				+0.2
3,963,434	+				+0.2
3,963,434	+				+0.5
3,963,434	+				+0.1
3,963,434	+				+0.8
3,963,435	-				-0.4
3,963,435	-				+0.2
3,963,435	-				+0.7
3,963,477	-				-0.5
3,963,491	+				+0.2
3,963,491	+				+0.3
3,963,511	-		HER17_RS17620	0.10	+0.5
3,963,514	+		HER17_RS17620	0.10	+1.0
3,963,514	+		HER17_RS17620	0.10	-0.1
3,963,515	-		HER17_RS17620	0.10	+0.3
3,963,515	-		HER17_RS17620	0.10	-1.9
3,963,515	-		HER17_RS17620	0.10	-1.3
3,963,515	-		HER17_RS17620	0.10	+0.4
3,963,515	-		HER17_RS17620	0.10	-0.1
3,963,542	+		HER17_RS17620	0.11	+1.1
3,963,542	+		HER17_RS17620	0.11	-0.3
3,963,564	+		HER17_RS17620	0.12	+0.7
3,963,564	+		HER17_RS17620	0.12	+0.2
3,963,564	+		HER17_RS17620	0.12	-0.7
3,963,564	+		HER17_RS17620	0.12	+0.4
3,963,564	+		HER17_RS17620	0.12	+0.7
3,963,564	+		HER17_RS17620	0.12	+0.5
3,963,565	-		HER17_RS17620	0.12	+0.6
3,963,565	-		HER17_RS17620	0.12	+0.2
3,963,565	-		HER17_RS17620	0.12	-0.4
3,963,565	-		HER17_RS17620	0.12	-0.2
3,963,565	-		HER17_RS17620	0.12	-0.3