Experiment: M9+starch
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HER17_RS02695 and HER17_RS02700 are separated by 260 nucleotides HER17_RS02700 and HER17_RS02705 are separated by 247 nucleotides
HER17_RS02695: HER17_RS02695 - class II fructose-bisphosphate aldolase, at 604,547 to 605,623
_RS02695
HER17_RS02700: HER17_RS02700 - small-conductance mechanosensitive channel MscS, at 605,884 to 606,732
_RS02700
HER17_RS02705: HER17_RS02705 - arginine exporter ArgO, at 606,980 to 607,594
_RS02705
Position (kb) 605
606
607 Strain fitness (log2 ratio) -2
-1
0
1
2 at 605.602 kb on + strand at 605.603 kb on - strand at 605.621 kb on + strand at 605.622 kb on - strand at 605.636 kb on - strand at 605.636 kb on - strand at 605.636 kb on - strand at 605.636 kb on - strand at 605.636 kb on - strand at 605.643 kb on - strand at 605.643 kb on - strand at 605.647 kb on - strand at 605.693 kb on + strand at 605.693 kb on + strand at 605.693 kb on + strand at 605.693 kb on + strand at 605.693 kb on + strand at 605.701 kb on + strand at 605.701 kb on + strand at 605.701 kb on + strand at 605.701 kb on + strand at 605.702 kb on - strand at 605.702 kb on - strand at 605.702 kb on - strand at 605.702 kb on - strand at 605.733 kb on + strand at 605.733 kb on + strand at 605.733 kb on + strand at 605.733 kb on + strand at 605.733 kb on + strand at 605.733 kb on + strand at 605.734 kb on - strand at 605.734 kb on - strand at 605.734 kb on - strand at 605.734 kb on - strand at 605.749 kb on + strand at 605.749 kb on + strand at 605.749 kb on + strand at 605.760 kb on + strand at 605.761 kb on - strand at 605.777 kb on + strand at 605.777 kb on + strand at 605.787 kb on - strand at 605.956 kb on + strand at 605.956 kb on + strand at 605.957 kb on - strand at 605.957 kb on - strand at 605.967 kb on + strand at 605.981 kb on + strand, within HER17_RS02700 at 605.982 kb on - strand, within HER17_RS02700 at 606.036 kb on + strand, within HER17_RS02700 at 606.037 kb on - strand, within HER17_RS02700 at 606.131 kb on + strand, within HER17_RS02700 at 606.209 kb on + strand, within HER17_RS02700 at 606.209 kb on + strand, within HER17_RS02700 at 606.209 kb on + strand, within HER17_RS02700 at 606.312 kb on + strand, within HER17_RS02700 at 606.320 kb on + strand, within HER17_RS02700 at 606.441 kb on + strand, within HER17_RS02700 at 606.457 kb on + strand, within HER17_RS02700 at 606.457 kb on + strand, within HER17_RS02700 at 606.457 kb on + strand, within HER17_RS02700 at 606.457 kb on + strand, within HER17_RS02700 at 606.458 kb on - strand, within HER17_RS02700 at 606.458 kb on - strand, within HER17_RS02700 at 606.458 kb on - strand, within HER17_RS02700 at 606.458 kb on - strand, within HER17_RS02700 at 606.458 kb on - strand, within HER17_RS02700 at 606.477 kb on - strand, within HER17_RS02700 at 606.477 kb on - strand, within HER17_RS02700 at 606.731 kb on - strand at 606.740 kb on + strand at 606.740 kb on + strand at 606.740 kb on + strand at 606.740 kb on + strand at 606.740 kb on + strand at 606.740 kb on + strand at 606.741 kb on - strand at 606.741 kb on - strand at 606.741 kb on - strand at 606.741 kb on - strand at 606.741 kb on - strand at 606.741 kb on - strand at 606.741 kb on - strand at 606.744 kb on + strand at 606.744 kb on + strand at 606.744 kb on + strand at 606.744 kb on + strand at 606.744 kb on + strand at 606.744 kb on + strand at 606.744 kb on + strand at 606.745 kb on - strand at 606.745 kb on - strand at 606.745 kb on - strand at 606.749 kb on + strand at 606.749 kb on + strand at 606.750 kb on - strand at 606.789 kb on - strand at 606.853 kb on + strand at 606.853 kb on + strand at 606.854 kb on - strand at 606.854 kb on - strand at 606.892 kb on + strand at 606.892 kb on + strand at 606.893 kb on - strand at 606.893 kb on - strand at 606.893 kb on - strand at 606.908 kb on + strand at 606.923 kb on - strand at 606.927 kb on - strand at 606.927 kb on - strand at 606.927 kb on - strand at 606.959 kb on + strand at 606.959 kb on + strand at 606.959 kb on + strand at 606.959 kb on + strand at 606.960 kb on - strand at 606.960 kb on - strand at 606.979 kb on + strand at 606.979 kb on + strand at 606.980 kb on - strand at 606.980 kb on - strand at 606.980 kb on - strand at 606.980 kb on - strand at 606.980 kb on - strand at 606.980 kb on - strand at 606.992 kb on + strand at 606.992 kb on + strand at 606.992 kb on + strand at 606.993 kb on - strand at 606.993 kb on - strand at 606.996 kb on + strand at 606.997 kb on - strand at 607.104 kb on + strand, within HER17_RS02705 at 607.104 kb on + strand, within HER17_RS02705 at 607.104 kb on + strand, within HER17_RS02705 at 607.104 kb on + strand, within HER17_RS02705 at 607.105 kb on - strand, within HER17_RS02705 at 607.105 kb on - strand, within HER17_RS02705 at 607.265 kb on - strand, within HER17_RS02705 at 607.313 kb on - strand, within HER17_RS02705 at 607.313 kb on - strand, within HER17_RS02705 at 607.355 kb on + strand, within HER17_RS02705 at 607.355 kb on + strand, within HER17_RS02705 at 607.371 kb on + strand, within HER17_RS02705 at 607.372 kb on - strand, within HER17_RS02705 at 607.473 kb on + strand, within HER17_RS02705 at 607.592 kb on + strand at 607.605 kb on + strand at 607.605 kb on + strand at 607.605 kb on + strand at 607.609 kb on + strand at 607.644 kb on + strand at 607.644 kb on + strand at 607.645 kb on - strand at 607.645 kb on - strand at 607.645 kb on - strand at 607.645 kb on - strand at 607.646 kb on + strand at 607.646 kb on + strand at 607.646 kb on + strand at 607.647 kb on - strand at 607.651 kb on + strand at 607.651 kb on + strand at 607.651 kb on + strand at 607.651 kb on + strand at 607.651 kb on + strand at 607.651 kb on + strand at 607.651 kb on + strand at 607.652 kb on - strand at 607.670 kb on + strand at 607.670 kb on + strand at 607.671 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9+starch remove 605,602 + -0.9 605,603 - -1.4 605,621 + -1.0 605,622 - -0.1 605,636 - +0.1 605,636 - +0.6 605,636 - -1.2 605,636 - -1.1 605,636 - -0.6 605,643 - -0.1 605,643 - -0.1 605,647 - -0.1 605,693 + +0.8 605,693 + +0.5 605,693 + +0.8 605,693 + -1.3 605,693 + +0.1 605,701 + -0.3 605,701 + +0.6 605,701 + +0.2 605,701 + -1.1 605,702 - -2.2 605,702 - +0.2 605,702 - -0.5 605,702 - +0.5 605,733 + +0.2 605,733 + -0.9 605,733 + +1.0 605,733 + +0.4 605,733 + -0.6 605,733 + +1.1 605,734 - -0.2 605,734 - -0.1 605,734 - -0.1 605,734 - -0.6 605,749 + +1.3 605,749 + +0.1 605,749 + -1.0 605,760 + -1.1 605,761 - +0.5 605,777 + -0.3 605,777 + -0.6 605,787 - +0.3 605,956 + +0.7 605,956 + +0.3 605,957 - +0.1 605,957 - -0.5 605,967 + +0.0 605,981 + HER17_RS02700 0.11 +0.5 605,982 - HER17_RS02700 0.12 -0.2 606,036 + HER17_RS02700 0.18 +0.7 606,037 - HER17_RS02700 0.18 +1.2 606,131 + HER17_RS02700 0.29 -0.7 606,209 + HER17_RS02700 0.38 +2.2 606,209 + HER17_RS02700 0.38 +0.3 606,209 + HER17_RS02700 0.38 +0.6 606,312 + HER17_RS02700 0.50 +0.5 606,320 + HER17_RS02700 0.51 +0.8 606,441 + HER17_RS02700 0.66 -0.2 606,457 + HER17_RS02700 0.67 +1.6 606,457 + HER17_RS02700 0.67 +0.5 606,457 + HER17_RS02700 0.67 +0.1 606,457 + HER17_RS02700 0.67 -0.1 606,458 - HER17_RS02700 0.68 -0.2 606,458 - HER17_RS02700 0.68 +0.7 606,458 - HER17_RS02700 0.68 -0.0 606,458 - HER17_RS02700 0.68 -1.1 606,458 - HER17_RS02700 0.68 -2.1 606,477 - HER17_RS02700 0.70 +0.3 606,477 - HER17_RS02700 0.70 +0.2 606,731 - +0.4 606,740 + +0.0 606,740 + -0.8 606,740 + -0.1 606,740 + +0.3 606,740 + +0.2 606,740 + +0.4 606,741 - -0.6 606,741 - +0.2 606,741 - -0.1 606,741 - -0.2 606,741 - -1.1 606,741 - -0.4 606,741 - +0.8 606,744 + -0.0 606,744 + +0.2 606,744 + -0.1 606,744 + +0.2 606,744 + +0.9 606,744 + +1.2 606,744 + +0.5 606,745 - +0.7 606,745 - -0.2 606,745 - +1.3 606,749 + +1.4 606,749 + -0.0 606,750 - -1.4 606,789 - -0.1 606,853 + +0.8 606,853 + +0.2 606,854 - +0.8 606,854 - -0.3 606,892 + +0.7 606,892 + +0.3 606,893 - -0.5 606,893 - +0.5 606,893 - -0.2 606,908 + -0.5 606,923 - -0.1 606,927 - -0.3 606,927 - -0.2 606,927 - -0.0 606,959 + +0.1 606,959 + -2.4 606,959 + -0.4 606,959 + -0.8 606,960 - -0.6 606,960 - +0.9 606,979 + -0.2 606,979 + +0.2 606,980 - -0.1 606,980 - +1.9 606,980 - +0.0 606,980 - +0.2 606,980 - +0.2 606,980 - +1.4 606,992 + -0.7 606,992 + -0.2 606,992 + -0.3 606,993 - -1.3 606,993 - -0.6 606,996 + +0.1 606,997 - +0.3 607,104 + HER17_RS02705 0.20 +0.7 607,104 + HER17_RS02705 0.20 +0.1 607,104 + HER17_RS02705 0.20 +0.6 607,104 + HER17_RS02705 0.20 -0.3 607,105 - HER17_RS02705 0.20 +0.3 607,105 - HER17_RS02705 0.20 -0.4 607,265 - HER17_RS02705 0.46 +0.6 607,313 - HER17_RS02705 0.54 +1.0 607,313 - HER17_RS02705 0.54 -0.1 607,355 + HER17_RS02705 0.61 +0.9 607,355 + HER17_RS02705 0.61 -0.2 607,371 + HER17_RS02705 0.64 +0.1 607,372 - HER17_RS02705 0.64 +0.7 607,473 + HER17_RS02705 0.80 +1.1 607,592 + +0.9 607,605 + -0.5 607,605 + -1.4 607,605 + +0.2 607,609 + -0.4 607,644 + -0.1 607,644 + +0.0 607,645 - -0.2 607,645 - -0.6 607,645 - +0.2 607,645 - +0.9 607,646 + +0.5 607,646 + +0.2 607,646 + +0.3 607,647 - -1.9 607,651 + +0.4 607,651 + +0.4 607,651 + +0.4 607,651 + -0.4 607,651 + +0.3 607,651 + +0.2 607,651 + +0.1 607,652 - -0.6 607,670 + -0.1 607,670 + -1.0 607,671 - +1.4
Or see this region's nucleotide sequence